FFCP PHASE1:Mm9::chr11:74403517..74403535,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=380711|HGNC=|MCL_coexpression_id=2|UniProt=Q5SUE5|association_with_transcript=90bp_to_ENSMUST00000145524_5end|description=CAGE_peak_4_at_Rap1gap2_5end|id=chr11:74403517..74403535,-|ontology_enrichment_celltype=CL:0000117!1.08e-17!23;CL:0000337!1.08e-17!23;CL:0000540!3.43e-10!33;CL:0000047!3.43e-10!33;CL:0000031!3.43e-10!33;CL:0000404!3.43e-10!33;CL:0000393!1.24e-07!39;CL:0000211!1.24e-07!39;CL:0000221!2.59e-07!44;CL:0000133!2.59e-07!44;CL:0002319!5.71e-07!43|ontology_enrichment_celltype_v019_2=CL:0000117,8.11e-20,23;CL:0000337,8.11e-20,23;CL:0000540,6.40e-13,33;CL:0000047,6.40e-13,33;CL:0000031,6.40e-13,33;CL:0000404,6.40e-13,33;CL:0000393,1.74e-10,39;CL:0000211,1.74e-10,39;CL:0002613,2.78e-09,3;CL:0002319,3.03e-09,43;CL:0000221,5.71e-09,44;CL:0000133,5.71e-09,44;CL:0002612,1.50e-08,3;CL:0000120,1.69e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.35e-28!52;UBERON:0005068!1.35e-28!52;UBERON:0006241!1.35e-28!52;UBERON:0007135!1.35e-28!52;UBERON:0000955!1.71e-26!50;UBERON:0006238!1.71e-26!50;UBERON:0002020!2.67e-26!34;UBERON:0001017!1.31e-25!73;UBERON:0005743!1.31e-25!73;UBERON:0000073!1.70e-25!75;UBERON:0001016!1.70e-25!75;UBERON:0002616!1.95e-25!49;UBERON:0000033!1.48e-23!63;UBERON:0002346!3.58e-22!71;UBERON:0003075!3.58e-22!71;UBERON:0007284!3.58e-22!71;UBERON:0002791!3.87e-21!29;UBERON:0003528!3.87e-21!29;UBERON:0001893!3.87e-21!29;UBERON:0003080!5.66e-21!40;UBERON:0004121!3.82e-20!102;UBERON:0000924!3.82e-20!102;UBERON:0006601!3.82e-20!102;UBERON:0002780!4.94e-20!39;UBERON:0001890!4.94e-20!39;UBERON:0006240!4.94e-20!39;UBERON:0003056!1.83e-19!49;UBERON:0002619!5.42e-14!17;UBERON:0000956!8.88e-14!21;UBERON:0001869!8.88e-14!21;UBERON:0000203!8.88e-14!21;UBERON:0007811!2.01e-13!86;UBERON:0002021!3.87e-13!10;UBERON:0000411!3.87e-13!10;UBERON:0001950!3.87e-13!10;UBERON:0000153!3.87e-11!94;UBERON:0002420!1.07e-08!8;UBERON:0007245!1.07e-08!8;UBERON:0010009!1.07e-08!8;UBERON:0010011!1.07e-08!8;UBERON:0000454!1.07e-08!8;UBERON:0003076!4.83e-08!12;UBERON:0003057!4.83e-08!12;UBERON:0002240!5.85e-07!6;UBERON:0005174!5.85e-07!6;UBERON:0001137!5.85e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.88e-36,34;UBERON:0000073,3.14e-35,54;UBERON:0001017,1.99e-33,73;UBERON:0001016,2.22e-32,75;UBERON:0001049,2.12e-31,52;UBERON:0005068,2.12e-31,52;UBERON:0006241,2.12e-31,52;UBERON:0007135,2.12e-31,52;UBERON:0002021,4.23e-29,10;UBERON:0000411,4.23e-29,10;UBERON:0001950,4.23e-29,10;UBERON:0003528,1.33e-25,29;UBERON:0002791,1.33e-25,29;UBERON:0001893,1.33e-25,29;UBERON:0000955,1.07e-24,47;UBERON:0006238,1.07e-24,47;UBERON:0002346,1.71e-24,64;UBERON:0003075,1.71e-24,64;UBERON:0007284,1.71e-24,64;UBERON:0003080,2.02e-24,40;UBERON:0004121,2.53e-24,95;UBERON:0000924,2.53e-24,95;UBERON:0006601,2.53e-24,95;UBERON:0002616,7.33e-23,46;UBERON:0002780,1.24e-22,39;UBERON:0001890,1.24e-22,39;UBERON:0006240,1.24e-22,39;UBERON:0010371,8.46e-21,73;UBERON:0002619,2.03e-19,17;UBERON:0003056,4.15e-19,49;UBERON:0000956,2.38e-18,21;UBERON:0001869,2.38e-18,21;UBERON:0000203,2.38e-18,21;UBERON:0010314,2.28e-15,92;UBERON:0001948,4.24e-13,5;UBERON:0002315,4.24e-13,5;UBERON:0000025,2.45e-11,114;UBERON:0002240,7.10e-11,6;UBERON:0005174,7.10e-11,6;UBERON:0001137,7.10e-11,6;UBERON:0004111,3.13e-10,122;UBERON:0000369,4.07e-09,5;UBERON:0002435,4.07e-09,5;UBERON:0000204,4.07e-09,5;UBERON:0010082,4.07e-09,5;UBERON:0011216,8.65e-09,194;UBERON:0002257,1.50e-08,3;UBERON:0002420,2.60e-08,8;UBERON:0007245,2.60e-08,8;UBERON:0010009,2.60e-08,8;UBERON:0010011,2.60e-08,8;UBERON:0000454,2.60e-08,8;UBERON:0003076,2.49e-07,12;UBERON:0003057,2.49e-07,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02316460859598,1.05798195854407,2.53532561402472,0,0,0,0,0,0,0,0,0.540023753326763,0,1.42825492201902,1.76694832761291,0.122490799214954,0.575072826109418,0.919218786610021,2.20231761998777,1.0214987046815,0.307213066512487,2.63772575460388,2.92760459527711,2.6045668527838,0.558365998002762,1.12552522006336,0.916789486660861,1.47314292736834,2.13557521198654,1.67759501242771,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23517741427141,0,0,0,0,0,0,0,0,1.17112318804619,0.628340120440365,0,0,0,0,1.3481157546434,0.457500602818626,1.13088916901578,4.51943232499919,2.55715457330331,1.0389402227978,1.62241263067758,0,0,0,0,0,0,0,0.452114453507145,0.204109497453984,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26173969138476,0.720332286654991,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.937693492737625,0,0,0,0,0,0,0,0,0,0,0,2.24924921495265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0,0.178368817602071,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,3.95326289831947,3.68260189205742,2.86447756719698,3.09335728218638,4.11049511862385,5.2877572817279,4.72515750162264,4.95353323546643,5.43770890781046,4.65984280576638,0.31136204275253,0.399024873401031,0.170733605754134,0.486213434136588,0.209613162627982,0,0.222246727801615,0.618105171716683,0.962757628775446,0.252697211763798,0,0,0.468207537349412,0.448176066834085,0.229741875822453,0.476293691283074,0.463537303779422,0.192909220463705,0.412085900803307,0.735994600671987,0.685738504770831,0.177475806159338,0.476872379894642,0.145346416632329,0.282328141245992,0.592302255241736,0.182927972872773,0,0,0,0.355905054372522,0.29551344712669,0.409231043169689,0.154936841185966,0.192906610981141,0.499621155875892,0.233931608445408,0.214871054048298,0,0,0|short_description=p4@Rap1gap2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=380711 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|TSSclassifier=NA | |||
|UniProt=Q5SUE5 | |||
|association_with_transcript=90bp_to_ENSMUST00000145524_5end | |||
|cluster_id=chr11:74403517..74403535,- | |||
|description=CAGE_peak_4_at_Rap1gap2_5end | |||
|id=chr11:74403517..74403535,- | |||
|ontology_enrichment_celltype=CL:0000117!1.08e-17!23;CL:0000337!1.08e-17!23;CL:0000540!3.43e-10!33;CL:0000047!3.43e-10!33;CL:0000031!3.43e-10!33;CL:0000404!3.43e-10!33;CL:0000393!1.24e-07!39;CL:0000211!1.24e-07!39;CL:0000221!2.59e-07!44;CL:0000133!2.59e-07!44;CL:0002319!5.71e-07!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.11e-20,23;CL:0000337,8.11e-20,23;CL:0000540,6.40e-13,33;CL:0000047,6.40e-13,33;CL:0000031,6.40e-13,33;CL:0000404,6.40e-13,33;CL:0000393,1.74e-10,39;CL:0000211,1.74e-10,39;CL:0002613,2.78e-09,3;CL:0002319,3.03e-09,43;CL:0000221,5.71e-09,44;CL:0000133,5.71e-09,44;CL:0002612,1.50e-08,3;CL:0000120,1.69e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.35e-28!52;UBERON:0005068!1.35e-28!52;UBERON:0006241!1.35e-28!52;UBERON:0007135!1.35e-28!52;UBERON:0000955!1.71e-26!50;UBERON:0006238!1.71e-26!50;UBERON:0002020!2.67e-26!34;UBERON:0001017!1.31e-25!73;UBERON:0005743!1.31e-25!73;UBERON:0000073!1.70e-25!75;UBERON:0001016!1.70e-25!75;UBERON:0002616!1.95e-25!49;UBERON:0000033!1.48e-23!63;UBERON:0002346!3.58e-22!71;UBERON:0003075!3.58e-22!71;UBERON:0007284!3.58e-22!71;UBERON:0002791!3.87e-21!29;UBERON:0003528!3.87e-21!29;UBERON:0001893!3.87e-21!29;UBERON:0003080!5.66e-21!40;UBERON:0004121!3.82e-20!102;UBERON:0000924!3.82e-20!102;UBERON:0006601!3.82e-20!102;UBERON:0002780!4.94e-20!39;UBERON:0001890!4.94e-20!39;UBERON:0006240!4.94e-20!39;UBERON:0003056!1.83e-19!49;UBERON:0002619!5.42e-14!17;UBERON:0000956!8.88e-14!21;UBERON:0001869!8.88e-14!21;UBERON:0000203!8.88e-14!21;UBERON:0007811!2.01e-13!86;UBERON:0002021!3.87e-13!10;UBERON:0000411!3.87e-13!10;UBERON:0001950!3.87e-13!10;UBERON:0000153!3.87e-11!94;UBERON:0002420!1.07e-08!8;UBERON:0007245!1.07e-08!8;UBERON:0010009!1.07e-08!8;UBERON:0010011!1.07e-08!8;UBERON:0000454!1.07e-08!8;UBERON:0003076!4.83e-08!12;UBERON:0003057!4.83e-08!12;UBERON:0002240!5.85e-07!6;UBERON:0005174!5.85e-07!6;UBERON:0001137!5.85e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.88e-36,34;UBERON:0000073,3.14e-35,54;UBERON:0001017,1.99e-33,73;UBERON:0001016,2.22e-32,75;UBERON:0001049,2.12e-31,52;UBERON:0005068,2.12e-31,52;UBERON:0006241,2.12e-31,52;UBERON:0007135,2.12e-31,52;UBERON:0002021,4.23e-29,10;UBERON:0000411,4.23e-29,10;UBERON:0001950,4.23e-29,10;UBERON:0003528,1.33e-25,29;UBERON:0002791,1.33e-25,29;UBERON:0001893,1.33e-25,29;UBERON:0000955,1.07e-24,47;UBERON:0006238,1.07e-24,47;UBERON:0002346,1.71e-24,64;UBERON:0003075,1.71e-24,64;UBERON:0007284,1.71e-24,64;UBERON:0003080,2.02e-24,40;UBERON:0004121,2.53e-24,95;UBERON:0000924,2.53e-24,95;UBERON:0006601,2.53e-24,95;UBERON:0002616,7.33e-23,46;UBERON:0002780,1.24e-22,39;UBERON:0001890,1.24e-22,39;UBERON:0006240,1.24e-22,39;UBERON:0010371,8.46e-21,73;UBERON:0002619,2.03e-19,17;UBERON:0003056,4.15e-19,49;UBERON:0000956,2.38e-18,21;UBERON:0001869,2.38e-18,21;UBERON:0000203,2.38e-18,21;UBERON:0010314,2.28e-15,92;UBERON:0001948,4.24e-13,5;UBERON:0002315,4.24e-13,5;UBERON:0000025,2.45e-11,114;UBERON:0002240,7.10e-11,6;UBERON:0005174,7.10e-11,6;UBERON:0001137,7.10e-11,6;UBERON:0004111,3.13e-10,122;UBERON:0000369,4.07e-09,5;UBERON:0002435,4.07e-09,5;UBERON:0000204,4.07e-09,5;UBERON:0010082,4.07e-09,5;UBERON:0011216,8.65e-09,194;UBERON:0002257,1.50e-08,3;UBERON:0002420,2.60e-08,8;UBERON:0007245,2.60e-08,8;UBERON:0010009,2.60e-08,8;UBERON:0010011,2.60e-08,8;UBERON:0000454,2.60e-08,8;UBERON:0003076,2.49e-07,12;UBERON:0003057,2.49e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.02316460859598,1.05798195854407,2.53532561402472,0,0,0,0,0,0,0,0,0.540023753326763,0,1.42825492201902,1.76694832761291,0.122490799214954,0.575072826109418,0.919218786610021,2.20231761998777,1.0214987046815,0.307213066512487,2.63772575460388,2.92760459527711,2.6045668527838,0.558365998002762,1.12552522006336,0.916789486660861,1.47314292736834,2.13557521198654,1.67759501242771,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23517741427141,0,0,0,0,0,0,0,0,1.17112318804619,0.628340120440365,0,0,0,0,1.3481157546434,0.457500602818626,1.13088916901578,4.51943232499919,2.55715457330331,1.0389402227978,1.62241263067758,0,0,0,0,0,0,0,0.452114453507145,0.204109497453984,0.12811372028485,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26173969138476,0.720332286654991,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.937693492737625,0,0,0,0,0,0,0,0,0,0,0,2.24924921495265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0.129358683782755,0,0,0.178368817602071,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209088296014469,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,3.95326289831947,3.68260189205742,2.86447756719698,3.09335728218638,4.11049511862385,5.2877572817279,4.72515750162264,4.95353323546643,5.43770890781046,4.65984280576638,0.31136204275253,0.399024873401031,0.170733605754134,0.486213434136588,0.209613162627982,0,0.222246727801615,0.618105171716683,0.962757628775446,0.252697211763798,0,0,0.468207537349412,0.448176066834085,0.229741875822453,0.476293691283074,0.463537303779422,0.192909220463705,0.412085900803307,0.735994600671987,0.685738504770831,0.177475806159338,0.476872379894642,0.145346416632329,0.282328141245992,0.592302255241736,0.182927972872773,0,0,0,0.355905054372522,0.29551344712669,0.409231043169689,0.154936841185966,0.192906610981141,0.499621155875892,0.233931608445408,0.214871054048298,0,0,0 | |||
|short_description=p4@Rap1gap2 | |||
}} |
Latest revision as of 15:51, 25 September 2015
Short description: | p4@Rap1gap2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Rap1gap2_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 90bp_to_ENSMUST00000145524_5end |
EntrezGene: | Rap1gap2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.11e-20 | 23 |
neuroblast (sensu Vertebrata) | 8.11e-20 | 23 |
neuron | 6.40e-13 | 33 |
neuronal stem cell | 6.40e-13 | 33 |
neuroblast | 6.40e-13 | 33 |
electrically signaling cell | 6.40e-13 | 33 |
electrically responsive cell | 1.74e-10 | 39 |
electrically active cell | 1.74e-10 | 39 |
striatum neuron | 2.78e-09 | 3 |
neural cell | 3.03e-09 | 43 |
ectodermal cell | 5.71e-09 | 44 |
neurectodermal cell | 5.71e-09 | 44 |
neuron of the ventral spinal cord | 1.50e-08 | 3 |
granule cell | 1.69e-08 | 3 |