FFCP PHASE1:Hg19::chr3:111314186..111314204,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79413 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20710 | |||
|TSSclassifier=strong | |||
|UniProt=Q9BTP6 | |||
|association_with_transcript=-4bp_to_NM_024508_5end | |||
|cluster_id=chr3:111314186..111314204,- | |||
|coexpression_cluster_id=C1497 | |||
|description=CAGE_peak_1_at_ZBED2_5end | |||
|id=chr3:111314186..111314204,- | |||
|ontology_enrichment_celltype=CL:0002076!2.25e-22!43;CL:0000066!7.78e-20!254;CL:0000223!7.63e-14!59;CL:0002368!1.00e-12!13;CL:0002202!1.66e-09!9;CL:0002632!1.66e-09!9;CL:0002159!2.42e-08!13;CL:0002251!2.46e-08!21 | |||
|ontology_enrichment_celltype_v019=CL:0002076;5.16e-21;42!CL:0002368;9.08e-18;13!CL:0002202;4.06e-13;9!CL:0002632;4.06e-13;9!CL:0002159;4.94e-11;14!CL:0000349;5.57e-09;19!CL:0002251;3.97e-08;20!CL:1000507;8.60e-08;10!CL:1000494;8.60e-08;10!CL:0000244;1.72e-07;4!CL:0000731;1.72e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,4.01e-28,42;CL:0000066,2.29e-25,253;CL:0000223,6.81e-19,58;CL:0002368,9.13e-18,13;CL:0002202,4.29e-13,9;CL:0002632,4.29e-13,9;CL:0002159,5.09e-11,14;CL:0000349,5.63e-09,19;CL:0002251,3.78e-08,20;CL:1000507,8.09e-08,10;CL:1000494,8.09e-08,10;CL:0000244,1.70e-07,4;CL:0000731,1.70e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000223;1.08e-10;58 | |||
|ontology_enrichment_disease=DOID:1749!4.61e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;6.93e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,6.75e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0004119!3.32e-13!169;UBERON:0000925!3.32e-13!169;UBERON:0006595!3.32e-13!169;UBERON:0000464!3.97e-11!104;UBERON:0005631!6.11e-11!14;UBERON:0000158!6.11e-11!14;UBERON:0001004!3.32e-10!72;UBERON:0005911!5.30e-10!82;UBERON:0000478!1.42e-09!24;UBERON:0006554!5.58e-09!44;UBERON:0003100!9.64e-09!41;UBERON:0001008!1.33e-08!45;UBERON:0000466!2.42e-08!126;UBERON:0001007!3.25e-08!155;UBERON:0001555!3.25e-08!155;UBERON:0007026!3.25e-08!155;UBERON:0003124!3.71e-08!7;UBERON:0005153!4.44e-08!37;UBERON:0000065!5.34e-08!53;UBERON:0005156!8.25e-08!59;UBERON:0000990!8.25e-08!59;UBERON:0005157!2.21e-07!51;UBERON:0003134!3.69e-07!37;UBERON:0000474!3.69e-07!37;UBERON:0000077!3.92e-07!130;UBERON:0004807!5.03e-07!28;UBERON:0005178!6.61e-07!34;UBERON:0002224!6.61e-07!34;UBERON:0003133!6.88e-07!48;UBERON:0000058!7.12e-07!26;UBERON:0005795!7.27e-07!22;UBERON:0000064!8.21e-07!219;UBERON:0000161!8.47e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;1.17e-14;24!UBERON:0005631;2.67e-10;10!UBERON:0000158;2.67e-10;10!UBERON:0004807;3.75e-09;22!UBERON:0005911;3.97e-09;36!UBERON:0000365;9.32e-09;5!UBERON:0000486;2.87e-08;12!UBERON:0004211;8.60e-08;10!UBERON:0009773;8.60e-08;10!UBERON:0001231;8.60e-08;10!UBERON:0004810;8.60e-08;10!UBERON:0005178;2.62e-07;34!UBERON:0002224;2.62e-07;34!UBERON:0001987;3.45e-07;4!UBERON:0005910;3.53e-07;6!UBERON:0003100;4.67e-07;41!UBERON:0007196;5.12e-07;15!UBERON:0001558;5.12e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.11e-15,14;UBERON:0000158,1.11e-15,14;UBERON:0000478,1.16e-14,24;UBERON:0004119,4.95e-13,160;UBERON:0000925,4.95e-13,160;UBERON:0006595,4.95e-13,160;UBERON:0003124,3.87e-11,7;UBERON:0001004,6.84e-11,74;UBERON:0005911,1.84e-09,82;UBERON:0003100,3.30e-09,41;UBERON:0004807,5.19e-09,28;UBERON:0000365,9.19e-09,5;UBERON:0006554,9.39e-09,47;UBERON:0000065,1.44e-08,54;UBERON:0001008,1.87e-08,48;UBERON:0004810,8.09e-08,10;UBERON:0005153,1.29e-07,37;UBERON:0005157,1.38e-07,47;UBERON:0004923,1.89e-07,66;UBERON:0005178,2.11e-07,34;UBERON:0002224,2.11e-07,34;UBERON:0008814,3.33e-07,18;UBERON:0001987,3.43e-07,4;UBERON:0004340,3.43e-07,4;UBERON:0005910,3.50e-07,6;UBERON:0005181,4.45e-07,35;UBERON:0005795,4.83e-07,22;UBERON:0003134,4.84e-07,37;UBERON:0000474,4.84e-07,37;UBERON:0001007,5.06e-07,145;UBERON:0001555,5.06e-07,145;UBERON:0007026,5.06e-07,145;UBERON:0007196,5.28e-07,15;UBERON:0001558,5.28e-07,15;UBERON:0000153,6.23e-07,62;UBERON:0007811,6.23e-07,62 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,7.37201809504527,2.09340350391728,82.1339559209448,41.6751825600957,0.247532705920093,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0.0821005894499457,0.0787107813136792,0,0,1.85779347979291,39.5351126525939,36.14471025339,18.1179464981726,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0.779873198196215,0,0,0,1.28091319725675,1.43065282315866,1.47994114143309,0.829050053357545,0.579606171470105,0,0,0,0.453237370790265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0.087834785693126,2.16115474571226,24.0434890273078,21.1347132387125,0,0.348259474598534,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.3911037207036,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,1.1409436430889,0,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,83.4886885665442,70.3684991124353,80.3052867089211,0,0,0,0.207322110030741,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,1.22988438543114,0,78.1422032109414,39.3406136401668,118.925774362959,48.7015221533866,0,1.03993478527958,0,0,0.117408694235822,0,0,0,0,0,0,0,0,98.4205256861158,111.708115252242,91.0196124296121,44.868819874127,50.2796713629154,33.7376757665386,0,0,0,0,0,0,0,0,1.71072446022705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.61727252471503,0.871533458600294,1.49959486773086,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0.535286966391485,0.157702415033935,0,0,0,1.03473071292505,0,0.553107505625109,0,0,0,0,0,0,42.7409875739226,63.2454670139889,72.876060692453,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,48.7230722836982,11.510123616987,0,0,0.131124414959424,4.96319574198153,0.847168708148562,2.35304930753057,1.46139224653261,0.422206515571503,0,0,0.863663664408557,0,4.87703587578935,4.51520796469368,15.5474526557473,7.47968408035852,6.71624264166535,0,0,0,0,0,2.26690225624989,0,0,62.0206781035866,63.7059041115791,0,0,0,0,0,0,0,0,0,17.6854859436247,16.5283457933991,28.9680857362706,1.51736671283325,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,62.1594848206808,26.1417887458957,17.4225575778116,2.82431402330337,54.243676956575,55.5955869703164,29.7098202869573,74.8898284674688,0,0,0,0,0.411362273086194,0,0,0,0,0,23.278820518198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.12549761487054,259.515254909869,69.1927706340048,475.484766849611,0,0,0,62.6254722061686,0.63337622438398,0.19924798825107,0.828851746593443,0,0,0,0,22.1076143822424,0,0,0,0,0,0,0,0,0,0,0,1.2517279311405,16.0179799684443,3.07303986298317,0,0,0,0,1.5677537021303,0,0,0,0,0,0.83654246567162,1.38510465306835,0,0,0,0,89.3203247249374,3.29751336246704,33.0481561131554,0,0,0,0,0,0,0,0,11.3938954845135,40.4817364234686,0.141353071433941,0,0,0,0,46.257296074177,99.8396626687743,111.940329869848,0.067401132980677,0,0.468528891450678,0.182454789215666,3.91329237864179,0,0,0,0,0,0.150323419414493,0,0,0,0,0,2.27687636823834,0,8.15730770175115,9.11329295953712,18.4565517950453,0.17472666824203,0.51595809741485,0,0,0,5.33439590686307,0,1.12990370390266,0.137041924646751,0,0,0.586654148204409,1.68333522528221,0.213452994739353,1.39866726707491,0,0,0,0,0,0,0,0,0,0,0,0,0,0,29.1804963250039,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0.394028536495991,0.0524545881349981,9.60963062326599,0,0.575745591958336,0,0,0,0,0,0.326587360109409,0,0,0,0,0,0,0,0,0,6.34333520085005,3.41719720216623,0.157204305099666,0.414239055347196,0,0,1.58330377895165,20.4269202486458,0,0,0,0,0,0,0,0,0,0,0,0,0.37494122388632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295710299979268,1.11507737014592,0,0.931577741257556,0,0,0,0,0.380805212168795,1.62748293281865,0,1.8259794697223,0,0,0,0,0,0,0,4.07439023612359,0,0.453411851024545,0,0,0,29.6449389274533,0.438568099157414,0,4.05119480368921,0,0,0,0,0,0.194860308839388,0.132864840313363,0,0,0,38.0361822045529,135.191479597933,0,0,0,0,4.19638523158333,14.3077769807584,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578063025868136,0,0,0,0,0,0,1.42769420259154,1.57036349601641,0.235939446695481,27.5142897782519,0.115525666150338,0,0,0,1.88025820873143,0,0,0,0.163771917510097,110.59635249035,0,0,0,0,0,1.64477330057155,1.48863353516788,0,0.894336993477167,0,0,0,0.455324382702595,5.9430588008968,10.3710588800201,0,0,0,2.2456829767954,0.222462803784138,0.078493092850514,0.471346769748006,0,0.913158720509496,0.647782773655864,0,0.0714765441766563,0,0,0,0,11.189672864804,1.53646629384555,0,0.430227358820278,0,0,0,32.3040684647111,3.1020638566432,1.91107787795487,0.447421727191169,1.86485443868962,0,0,0,0,1.45713297917742,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0.386747327841463,0.0999411559249289,1.60698544745092,23.2910615332357,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0.101988829741982,0,0,0,0.151557396436479,0.535928260312357,0,0.103432995861895,5.5440835294255,7.85612623830343,24.8667302868624,24.8298857183432,2.01837352645104,101.580864611951,8.48892193624521,10.8858373948481,8.55583252713203,8.95782305094014,0.78894425931944,0,19.9438008096888,0,0,0,4.69281884806909,0.244482888365733,1.22068853494722,0,7.648404156459,0 | |||
|short_description=p1@ZBED2 | |||
}} |
Latest revision as of 12:37, 19 September 2015
Short description: | p1@ZBED2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZBED2_5end |
Coexpression cluster: | C1497_amniotic_Mallassezderived_Prostate_Urothelial_papillotubular_Gingival_Amniotic |
Association with transcript: | -4bp_to_NM_024508_5end |
EntrezGene: | ZBED2 |
HGNC: | 20710 |
UniProt: | Q9BTP6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 4.01e-28 | 42 |
epithelial cell | 2.29e-25 | 253 |
endodermal cell | 6.81e-19 | 58 |
respiratory epithelial cell | 9.13e-18 | 13 |
epithelial cell of tracheobronchial tree | 4.29e-13 | 9 |
epithelial cell of lower respiratory tract | 4.29e-13 | 9 |
general ecto-epithelial cell | 5.09e-11 | 14 |
extraembryonic cell | 5.63e-09 | 19 |
epithelial cell of alimentary canal | 3.78e-08 | 20 |
kidney tubule cell | 8.09e-08 | 10 |
nephron tubule epithelial cell | 8.09e-08 | 10 |
transitional epithelial cell | 1.70e-07 | 4 |
urothelial cell | 1.70e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 6.75e-07 | 14 |