FFCP PHASE1:Mm9::chr11:6374909..6374949,+: Difference between revisions
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{{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=33|UniProt=|association_with_transcript=-478bp_to_ENSMUST00000127488_5end|description=CAGE_peak_3_at_ENSMUST00000127488_5end|id=chr11:6374909..6374949,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000988,5.47e-10,32;CL:0002032,5.47e-10,32;CL:0000037,5.47e-10,32;CL:0000837,5.47e-10,32;CL:0000738,9.04e-08,17;CL:0002087,9.04e-08,17;CL:0002031,2.12e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!8.35e-09!48;UBERON:0002390!4.31e-08!45;UBERON:0003061!4.31e-08!45|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.83e-14,48;UBERON:0002405,2.83e-14,48;UBERON:0002390,3.34e-13,45;UBERON:0003061,3.34e-13,45;UBERON:0002370,2.88e-12,23;UBERON:0000974,2.88e-12,23;UBERON:0004807,2.88e-12,23;UBERON:0005058,2.88e-12,23;UBERON:0003351,2.88e-12,23;UBERON:0009113,2.88e-12,23;UBERON:0003295,2.88e-12,23;UBERON:0009722,2.88e-12,23;UBERON:0005562,2.88e-12,23;UBERON:0007690,2.88e-12,23;UBERON:0006562,1.52e-11,24;UBERON:0003408,1.52e-11,24;UBERON:0001557,1.52e-11,24;UBERON:0001042,1.52e-11,24;UBERON:0008814,1.52e-11,24;UBERON:0009145,1.52e-11,24;UBERON:0000065,2.54e-11,41;UBERON:0001004,6.92e-11,42;UBERON:0004177,9.25e-10,29;UBERON:0005057,9.25e-10,29;UBERON:0000072,1.04e-09,27;UBERON:0000077,3.08e-07,35|phase1_expression=0.640595388419176,1.74487703819681,0,0.30246421130683,1.00179145989269,0.33575854382378,0.233612640595526,2.06597317506522,5.77233760821834,4.21316147379588,0.34243593645101,0.0797721589953364,0.856003649656029,2.88487327982691,0.333109761815663,0.404950534779652,0,1.73504190947031,2.19383093769182,1.27316895539409,0.680346321208558,1.48936426801328,0.783599367416806,0.47997726838022,1.37645568640302,0,0.86152399231815,0.430942465371778,0.190023419456374,0.252030129759931,0.665191531965914,0,0,0,0.288851619751275,0,0.204169356262369,3.76678467663217,2.3440060335714,2.61761871986899,1.76469446409304,0,2.42755176515577,0.251793635951155,0,0.183546752161682,0,0.436050312760893,0.439372365468944,0.194429899074283,0.979904951377538,0,1.67782606057736,9.42970784614748,7.05796978199174,0.514518872071894,0,0,0.202316460859598,0,0,0,0,0,0.988866362566974,0,1.79760066311043,0.768436610643109,0.207379224616955,0.270011876663381,0.420649922702764,0.571301968807607,0.662605622854841,0,0,0,0,0.766124028511126,1.68967186581868,0,0.0914876436024097,0,1.3959149950069,1.12552522006336,0.15279824777681,0.294628585473668,0.427115042397309,0.372798891650601,0.530083353332288,0.0755715601067855,0,0,0,0,0,0,0,0.170430322578058,0.259786004602869,0,0.281686839553361,0,0,0,0.216491041011214,0,0,0.68510327831436,1.8125651855302,0.890652834388949,0.693941307064543,0.304465478312141,0.230615497256059,0.60289056221049,0.587943535678524,0.125666591329675,0.988779870937496,0.722996784599558,0,0.647067399789637,1.32504911076236,0.969750506270444,0,0.585561594023094,1.04723353406728,0.255457055208591,1.1981512450592,0,1.77898317902291,0.599162557619291,0.915001205637253,0.125654352112864,0.347648640384553,0.767146371990992,0.41557608911912,1.46017136760982,1.01839363850316,1.49288364732112,0,0,0.260240885925407,0.229902104433473,0.360124259610698,0.60281927134286,0.748401490664606,0.640568601424249,0.374806898238915,0.517406741478031,0.431135985865684,0,0.175951124163949,0.43839146485515,0.278047249225598,0.348252166522167,0.823128545631774,0.398068533636986,1.40442637462647,2.57347907114715,1.13665399758237,0.414251545071004,0.234526059981096,0.720248245844059,0.473489471170421,0.590292695242212,0.462801338662135,0.232533944750408,0.536546802799238,1.05088808130453,0.493679549740441,0.656669856316381,0.648550476366846,0.438599962275997,0.219550115291051,0.805238512562231,0.420579897128254,0.617427674275707,0.330418782983798,0.793351699990633,0.639864751605702,0.232236671860439,0.38660238396628,0.201683524623343,0.444756087689741,0.190225626112559,0.949058123089023,1.31759163779209,0,0.994782360205754,0,0.898819408654221,0.216138049874694,0.199141273254367,0.379335801906163,0.342745537829186,1.1270773567308,0.407302655690628,0.193952487167626,1.19230893813542,0.758838445491087,0.442830443938806,0.156998727841375,0.493588655687202,0,0,0.786235980452812,0.449724224769707,0.811440485554012,0.482354319504834,0.763877555344259,1.15078454980324,0.972811360650212,0,0,0.372140947668503,0.312037673114561,0,0.358794827043824,0,1.47802552133284,0.189491411770485,0.325929952884052,0.509235257325564,0.234690248288502,1.00503754465089,1.19021820443007,3.12213836572478,1.10344600874334,1.99318220683897,1.91345722388985,0.655453258862952,0.863424909329478,0.867894351489069,3.01582567878545,1.08781136763742,0.983528546038072,0.551873492609465,0.321101179975584,0.937693492737625,0,1.00988370881749,0,0,0.430846795465598,0.238968797952552,0.222798674082394,0,0.809621403349789,0.292255857911312,0,0.642642632843614,0,0.890328018336276,0.651547837414304,0.494910368917606,0,0.971122544619926,0.906970670894253,0.188605079755898,0,0.6148702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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=33 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-478bp_to_ENSMUST00000127488_5end | |||
|cluster_id=chr11:6374909..6374949,+ | |||
|description=CAGE_peak_3_at_ENSMUST00000127488_5end | |||
|id=chr11:6374909..6374949,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,5.47e-10,32;CL:0002032,5.47e-10,32;CL:0000037,5.47e-10,32;CL:0000837,5.47e-10,32;CL:0000738,9.04e-08,17;CL:0002087,9.04e-08,17;CL:0002031,2.12e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!8.35e-09!48;UBERON:0002390!4.31e-08!45;UBERON:0003061!4.31e-08!45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,2.83e-14,48;UBERON:0002405,2.83e-14,48;UBERON:0002390,3.34e-13,45;UBERON:0003061,3.34e-13,45;UBERON:0002370,2.88e-12,23;UBERON:0000974,2.88e-12,23;UBERON:0004807,2.88e-12,23;UBERON:0005058,2.88e-12,23;UBERON:0003351,2.88e-12,23;UBERON:0009113,2.88e-12,23;UBERON:0003295,2.88e-12,23;UBERON:0009722,2.88e-12,23;UBERON:0005562,2.88e-12,23;UBERON:0007690,2.88e-12,23;UBERON:0006562,1.52e-11,24;UBERON:0003408,1.52e-11,24;UBERON:0001557,1.52e-11,24;UBERON:0001042,1.52e-11,24;UBERON:0008814,1.52e-11,24;UBERON:0009145,1.52e-11,24;UBERON:0000065,2.54e-11,41;UBERON:0001004,6.92e-11,42;UBERON:0004177,9.25e-10,29;UBERON:0005057,9.25e-10,29;UBERON:0000072,1.04e-09,27;UBERON:0000077,3.08e-07,35 | |||
|phase1_expression=0.640595388419176,1.74487703819681,0,0.30246421130683,1.00179145989269,0.33575854382378,0.233612640595526,2.06597317506522,5.77233760821834,4.21316147379588,0.34243593645101,0.0797721589953364,0.856003649656029,2.88487327982691,0.333109761815663,0.404950534779652,0,1.73504190947031,2.19383093769182,1.27316895539409,0.680346321208558,1.48936426801328,0.783599367416806,0.47997726838022,1.37645568640302,0,0.86152399231815,0.430942465371778,0.190023419456374,0.252030129759931,0.665191531965914,0,0,0,0.288851619751275,0,0.204169356262369,3.76678467663217,2.3440060335714,2.61761871986899,1.76469446409304,0,2.42755176515577,0.251793635951155,0,0.183546752161682,0,0.436050312760893,0.439372365468944,0.194429899074283,0.979904951377538,0,1.67782606057736,9.42970784614748,7.05796978199174,0.514518872071894,0,0,0.202316460859598,0,0,0,0,0,0.988866362566974,0,1.79760066311043,0.768436610643109,0.207379224616955,0.270011876663381,0.420649922702764,0.571301968807607,0.662605622854841,0,0,0,0,0.766124028511126,1.68967186581868,0,0.0914876436024097,0,1.3959149950069,1.12552522006336,0.15279824777681,0.294628585473668,0.427115042397309,0.372798891650601,0.530083353332288,0.0755715601067855,0,0,0,0,0,0,0,0.170430322578058,0.259786004602869,0,0.281686839553361,0,0,0,0.216491041011214,0,0,0.68510327831436,1.8125651855302,0.890652834388949,0.693941307064543,0.304465478312141,0.230615497256059,0.60289056221049,0.587943535678524,0.125666591329675,0.988779870937496,0.722996784599558,0,0.647067399789637,1.32504911076236,0.969750506270444,0,0.585561594023094,1.04723353406728,0.255457055208591,1.1981512450592,0,1.77898317902291,0.599162557619291,0.915001205637253,0.125654352112864,0.347648640384553,0.767146371990992,0.41557608911912,1.46017136760982,1.01839363850316,1.49288364732112,0,0,0.260240885925407,0.229902104433473,0.360124259610698,0.60281927134286,0.748401490664606,0.640568601424249,0.374806898238915,0.517406741478031,0.431135985865684,0,0.175951124163949,0.43839146485515,0.278047249225598,0.348252166522167,0.823128545631774,0.398068533636986,1.40442637462647,2.57347907114715,1.13665399758237,0.414251545071004,0.234526059981096,0.720248245844059,0.473489471170421,0.590292695242212,0.462801338662135,0.232533944750408,0.536546802799238,1.05088808130453,0.493679549740441,0.656669856316381,0.648550476366846,0.438599962275997,0.219550115291051,0.805238512562231,0.420579897128254,0.617427674275707,0.330418782983798,0.793351699990633,0.639864751605702,0.232236671860439,0.38660238396628,0.201683524623343,0.444756087689741,0.190225626112559,0.949058123089023,1.31759163779209,0,0.994782360205754,0,0.898819408654221,0.216138049874694,0.199141273254367,0.379335801906163,0.342745537829186,1.1270773567308,0.407302655690628,0.193952487167626,1.19230893813542,0.758838445491087,0.442830443938806,0.156998727841375,0.493588655687202,0,0,0.786235980452812,0.449724224769707,0.811440485554012,0.482354319504834,0.763877555344259,1.15078454980324,0.972811360650212,0,0,0.372140947668503,0.312037673114561,0,0.358794827043824,0,1.47802552133284,0.189491411770485,0.325929952884052,0.509235257325564,0.234690248288502,1.00503754465089,1.19021820443007,3.12213836572478,1.10344600874334,1.99318220683897,1.91345722388985,0.655453258862952,0.863424909329478,0.867894351489069,3.01582567878545,1.08781136763742,0.983528546038072,0.551873492609465,0.321101179975584,0.937693492737625,0,1.00988370881749,0,0,0.430846795465598,0.238968797952552,0.222798674082394,0,0.809621403349789,0.292255857911312,0,0.642642632843614,0,0.890328018336276,0.651547837414304,0.494910368917606,0,0.971122544619926,0.906970670894253,0.188605079755898,0,0.614870295887855,1.29214146584111,0.363533729477506,0.712994756769443,0,1.05418608574999,0,1.02131881726136,0.36012218806262,0.258717367565509,0,0.709360934569094,0.891844088010353,0.493647061806363,1.522324745573,0.938686832254841,0.63549621259146,0.220528398054962,0,0.322928853391811,0.482503399425247,0.596861720015682,0.492422699235184,0.874442509889552,0.18542530201051,0.341741761595705,0.82554747185289,1.11116716421827,0.941842285023455,0.27338845544205,0.915112692826091,2.03974115992626,2.37917468950219,1.65839968565309,0,0.632671987162271,1.01659733563424,0.324016022465404,0.209088296014469,0.218362563746178,0.134864346384821,0.661227645802687,0,0.129614973291793,0,0.56369293868419,0.598066184175915,0.165458490457098,0.194451188344048,0.258319646955462,0.337912250981556,1.29092962510329,0.2604087696879,0.524296722128554,0.241584120826006,0,2.8441000856536,1.21635129174099,1.1298205288131,0.909445760844565,2.50637373934474,1.98681354781265,1.9231271923195,3.39685912501528,2.92802704849628,2.51482461961499,3.02478555410522,3.41102582589133,2.69393156592922,4.32444538071805,0,0.443971906748129,0.717710852875806,0.335769232728157,0.579568782096571,0.563047426353546,0.549454872801795,0.214368379079066,0,1.12950368523413,1.38097570952153,1.71868654031819,2.92150409984269,1.37016503954128,0.755393897389701,0.67502250023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| |||
|short_description=p3@ENSMUST00000127488 | |||
}} |
Latest revision as of 07:17, 6 August 2015
Short description: | p3@ENSMUST00000127488 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_ENSMUST00000127488_5end |
Coexpression cluster: | MCL_coexpression_mm9:33 |
Association with transcript: | -478bp_to_ENSMUST00000127488_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 5.47e-10 | 32 |
hematopoietic oligopotent progenitor cell | 5.47e-10 | 32 |
hematopoietic stem cell | 5.47e-10 | 32 |
hematopoietic multipotent progenitor cell | 5.47e-10 | 32 |
leukocyte | 9.04e-08 | 17 |
nongranular leukocyte | 9.04e-08 | 17 |
hematopoietic lineage restricted progenitor cell | 2.12e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 2.83e-14 | 48 |
immune system | 2.83e-14 | 48 |
hematopoietic system | 3.34e-13 | 45 |
blood island | 3.34e-13 | 45 |
thymus | 2.88e-12 | 23 |
neck | 2.88e-12 | 23 |
respiratory system epithelium | 2.88e-12 | 23 |
hemolymphoid system gland | 2.88e-12 | 23 |
pharyngeal epithelium | 2.88e-12 | 23 |
thymic region | 2.88e-12 | 23 |
pharyngeal gland | 2.88e-12 | 23 |
entire pharyngeal arch endoderm | 2.88e-12 | 23 |
thymus primordium | 2.88e-12 | 23 |
early pharyngeal endoderm | 2.88e-12 | 23 |
pharynx | 1.52e-11 | 24 |
gland of gut | 1.52e-11 | 24 |
upper respiratory tract | 1.52e-11 | 24 |
chordate pharynx | 1.52e-11 | 24 |
pharyngeal arch system | 1.52e-11 | 24 |
pharyngeal region of foregut | 1.52e-11 | 24 |
respiratory tract | 2.54e-11 | 41 |
respiratory system | 6.92e-11 | 42 |
hemopoietic organ | 9.25e-10 | 29 |
immune organ | 9.25e-10 | 29 |
segment of respiratory tract | 1.04e-09 | 27 |
mixed endoderm/mesoderm-derived structure | 3.08e-07 | 35 |