FFCP PHASE1:Mm9::chr11:54769535..54769542,-: Difference between revisions
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{{FFCP|EntrezGene=57783|HGNC=|MCL_coexpression_id=24|UniProt=E9QM75|association_with_transcript=4bp_to_ENSMUST00000108889_5end|description=CAGE_peak_3_at_Tnip1_5end|id=chr11:54769535..54769542,-|ontology_enrichment_celltype=CL:0000239!8.27e-07!6;CL:0000677!8.27e-07!6;CL:0000212!8.27e-07!6;CL:0000584!8.27e-07!6|ontology_enrichment_celltype_v019_2=CL:0000239,1.22e-26,6;CL:0000677,1.22e-26,6;CL:0000584,1.22e-26,6;CL:0000075,8.94e-23,7;CL:0002563,1.30e-17,9;CL:0002251,1.30e-17,9;CL:0000066,3.35e-16,25;CL:0000682,5.42e-14,3;CL:0002076,2.31e-10,15;CL:0000223,4.35e-10,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000344!5.32e-11!15;UBERON:0001242!2.09e-09!13;UBERON:0000060!2.09e-09!13;UBERON:0001262!2.09e-09!13;UBERON:0004786!2.09e-09!13;UBERON:0004923!8.58e-09!24|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.33e-27,15;UBERON:0001242,7.75e-21,13;UBERON:0001262,7.75e-21,13;UBERON:0004786,7.75e-21,13;UBERON:0003350,1.30e-17,9;UBERON:0004808,1.30e-17,9;UBERON:0001277,1.30e-17,9;UBERON:0004923,1.11e-16,24;UBERON:0000160,4.19e-15,31;UBERON:0000485,2.54e-14,11;UBERON:0005409,2.37e-09,47;UBERON:0001962,3.56e-09,2;UBERON:0001961,3.56e-09,2;UBERON:0001744,3.56e-09,2|phase1_expression=0,9.07336059862339,7.73498706962211,5.14189159221611,6.51164448930251,2.01455126294268,1.86890112476421,0.258246646883153,0.140788722151667,0.468129052643987,0,0,0.513602189793617,0.262261207256992,0,0,0,0,0,0,0,0,0,1.27993938234725,1.83527424853736,5.16808767703518,3.87685796543167,3.66301095566011,0.950117097281869,0.252030129759931,1.77384408524244,0,0,0,0.577703239502549,0,0.408338712524738,0.418531630736908,0,0,0,0,0,0.755380907853464,0.405507724878058,0.734187008646726,0,0.218025156380447,0,0,0,0,0.167782606057736,0.725362142011344,0.336093799142464,0.771778308107841,0.573066879877513,0.515672092277442,0,0,0,0,0,0.449949858640699,0,0,0,0.384218305321555,0,0,0,0.285650984403804,0,0,0,0,0,0,0.153606533256243,0.131886287730194,0,0,0.279182999001381,0,0.15279824777681,0,0,0,0.075726193333184,0.151143120213571,1.15945795480671,0,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0.216491041011214,0.506719730950197,0.505524445014783,0.34255163915718,0,0.148442139064825,0.173485326766136,0.304465478312141,0.230615497256059,0.301445281105245,0,0.125666591329675,0.247194967734374,0.144599356919912,0,0,0,0,0,0,0,1.02182822083437,0.359445373517761,0.599902730993408,0,0.149790639404823,0,0,0.173824320192276,0,0.20778804455956,0,0,0,0,5.89237196482127,0,0,0,0.150704817835715,0,0,0,1.81092359517311,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0.196764231747404,0.154267112887378,0.232533944750408,0,0,0,0,0.162137619091711,0.146199987425332,0.219550115291051,0,0,0,3.30418782983798,1.32225283331772,0,0,0.128867461322093,0,0,0,0.474529061544512,0.329397909448022,0.251335208800269,0.397912944082302,0.38992817423824,1.79763881730844,0.432276099749388,0.199141273254367,0.189667900953082,0,0,0.407302655690628,0,0,0.126473074248515,0.147610147979602,0.156998727841375,0.246794327843601,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.184753190166605,0,0.325929952884052,0,0,0,0,0.195133647857799,0.157635144106191,0,0.159454768657487,0,0,0,0,0,0,0.275936746304732,0.321101179975584,0.35163505977661,0,0,0,0.390438744296638,0,0,0,0.283076530788832,0,0,0,0,0.141940085208269,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0.307435147943927,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0.178368817602071,0.164549020602121,0,0.23467170806371,0.21183207086382,0,0.32977250588296,0,0.0603129249281559,0,0,0.874442509889552,0.556275906031529,0,0,0,0,0.136694227721025,0.228778173206523,1.69978429993855,1.11961161858926,0.829199842826543,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0.26175594198403,0.648074866458964,0,0,0,0.165458490457098,0,0,0,0.234714477291508,0.13020438484395,0.104859344425711,0,0,0,0,0,0.129920822977795,0.179026695667481,0.198681354781265,0,0.147689527174577,0.201932899896295,0,0.100826185136841,0,0.192423683280659,0,0.453460767230423,0.443971906748129,0.0897138566094757,0.335769232728157,0,0.93841237725591,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0,0,0.476293691283074,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197008964751127,0,0,0,0,0,0,0,0,0|short_description=p3@Tnip1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=57783 | |||
|HGNC= | |||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=E9QM75 | |||
|association_with_transcript=4bp_to_ENSMUST00000108889_5end | |||
|cluster_id=chr11:54769535..54769542,- | |||
|description=CAGE_peak_3_at_Tnip1_5end | |||
|id=chr11:54769535..54769542,- | |||
|ontology_enrichment_celltype=CL:0000239!8.27e-07!6;CL:0000677!8.27e-07!6;CL:0000212!8.27e-07!6;CL:0000584!8.27e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.22e-26,6;CL:0000677,1.22e-26,6;CL:0000584,1.22e-26,6;CL:0000075,8.94e-23,7;CL:0002563,1.30e-17,9;CL:0002251,1.30e-17,9;CL:0000066,3.35e-16,25;CL:0000682,5.42e-14,3;CL:0002076,2.31e-10,15;CL:0000223,4.35e-10,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!5.32e-11!15;UBERON:0001242!2.09e-09!13;UBERON:0000060!2.09e-09!13;UBERON:0001262!2.09e-09!13;UBERON:0004786!2.09e-09!13;UBERON:0004923!8.58e-09!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.33e-27,15;UBERON:0001242,7.75e-21,13;UBERON:0001262,7.75e-21,13;UBERON:0004786,7.75e-21,13;UBERON:0003350,1.30e-17,9;UBERON:0004808,1.30e-17,9;UBERON:0001277,1.30e-17,9;UBERON:0004923,1.11e-16,24;UBERON:0000160,4.19e-15,31;UBERON:0000485,2.54e-14,11;UBERON:0005409,2.37e-09,47;UBERON:0001962,3.56e-09,2;UBERON:0001961,3.56e-09,2;UBERON:0001744,3.56e-09,2 | |||
|phase1_expression=0,9.07336059862339,7.73498706962211,5.14189159221611,6.51164448930251,2.01455126294268,1.86890112476421,0.258246646883153,0.140788722151667,0.468129052643987,0,0,0.513602189793617,0.262261207256992,0,0,0,0,0,0,0,0,0,1.27993938234725,1.83527424853736,5.16808767703518,3.87685796543167,3.66301095566011,0.950117097281869,0.252030129759931,1.77384408524244,0,0,0,0.577703239502549,0,0.408338712524738,0.418531630736908,0,0,0,0,0,0.755380907853464,0.405507724878058,0.734187008646726,0,0.218025156380447,0,0,0,0,0.167782606057736,0.725362142011344,0.336093799142464,0.771778308107841,0.573066879877513,0.515672092277442,0,0,0,0,0,0.449949858640699,0,0,0,0.384218305321555,0,0,0,0.285650984403804,0,0,0,0,0,0,0.153606533256243,0.131886287730194,0,0,0.279182999001381,0,0.15279824777681,0,0,0,0.075726193333184,0.151143120213571,1.15945795480671,0,0,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0.216491041011214,0.506719730950197,0.505524445014783,0.34255163915718,0,0.148442139064825,0.173485326766136,0.304465478312141,0.230615497256059,0.301445281105245,0,0.125666591329675,0.247194967734374,0.144599356919912,0,0,0,0,0,0,0,1.02182822083437,0.359445373517761,0.599902730993408,0,0.149790639404823,0,0,0.173824320192276,0,0.20778804455956,0,0,0,0,5.89237196482127,0,0,0,0.150704817835715,0,0,0,1.81092359517311,0,0,0,0,0,0,0,0,0,0,0,0,0.234526059981096,0.180062061461015,0,0.196764231747404,0.154267112887378,0.232533944750408,0,0,0,0,0.162137619091711,0.146199987425332,0.219550115291051,0,0,0,3.30418782983798,1.32225283331772,0,0,0.128867461322093,0,0,0,0.474529061544512,0.329397909448022,0.251335208800269,0.397912944082302,0.38992817423824,1.79763881730844,0.432276099749388,0.199141273254367,0.189667900953082,0,0,0.407302655690628,0,0,0.126473074248515,0.147610147979602,0.156998727841375,0.246794327843601,0.296452627087149,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179397413521912,0,0.184753190166605,0,0.325929952884052,0,0,0,0,0.195133647857799,0.157635144106191,0,0.159454768657487,0,0,0,0,0,0,0.275936746304732,0.321101179975584,0.35163505977661,0,0,0,0.390438744296638,0,0,0,0.283076530788832,0,0,0,0,0.141940085208269,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0.307435147943927,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0.178368817602071,0.164549020602121,0,0.23467170806371,0.21183207086382,0,0.32977250588296,0,0.0603129249281559,0,0,0.874442509889552,0.556275906031529,0,0,0,0,0.136694227721025,0.228778173206523,1.69978429993855,1.11961161858926,0.829199842826543,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0.26175594198403,0.648074866458964,0,0,0,0.165458490457098,0,0,0,0.234714477291508,0.13020438484395,0.104859344425711,0,0,0,0,0,0.129920822977795,0.179026695667481,0.198681354781265,0,0.147689527174577,0.201932899896295,0,0.100826185136841,0,0.192423683280659,0,0.453460767230423,0.443971906748129,0.0897138566094757,0.335769232728157,0,0.93841237725591,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0.0936415074698824,0,0,0.476293691283074,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197008964751127,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@Tnip1 | |||
}} |
Latest revision as of 17:30, 1 October 2015
Short description: | p3@Tnip1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Tnip1_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 4bp_to_ENSMUST00000108889_5end |
EntrezGene: | Tnip1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.22e-26 | 6 |
gut absorptive cell | 1.22e-26 | 6 |
enterocyte | 1.22e-26 | 6 |
columnar/cuboidal epithelial cell | 8.94e-23 | 7 |
intestinal epithelial cell | 1.30e-17 | 9 |
epithelial cell of alimentary canal | 1.30e-17 | 9 |
epithelial cell | 3.35e-16 | 25 |
M cell of gut | 5.42e-14 | 3 |
endo-epithelial cell | 2.31e-10 | 15 |
endodermal cell | 4.35e-10 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.33e-27 | 15 |
intestinal mucosa | 7.75e-21 | 13 |
wall of intestine | 7.75e-21 | 13 |
gastrointestinal system mucosa | 7.75e-21 | 13 |
epithelium of mucosa | 1.30e-17 | 9 |
gastrointestinal system epithelium | 1.30e-17 | 9 |
intestinal epithelium | 1.30e-17 | 9 |
organ component layer | 1.11e-16 | 24 |
intestine | 4.19e-15 | 31 |
simple columnar epithelium | 2.54e-14 | 11 |
gastrointestinal system | 2.37e-09 | 47 |
gut-associated lymphoid tissue | 3.56e-09 | 2 |
mucosa-associated lymphoid tissue | 3.56e-09 | 2 |
lymphoid tissue | 3.56e-09 | 2 |