FFCP PHASE1:Mm9::chr11:54720687..54720702,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=206|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:54720687..54720702,+|id=chr11:54720687..54720702,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002494,6.49e-10,3;CL:0000737,6.49e-10,3;CL:0000746,6.49e-10,3;CL:0000513,6.49e-10,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003103!3.85e-12!43;UBERON:0007100!2.10e-11!18;UBERON:0000948!2.10e-11!18;UBERON:0005498!2.10e-11!18;UBERON:0004140!2.10e-11!18;UBERON:0009881!2.10e-11!18;UBERON:0004141!2.10e-11!18;UBERON:0003084!2.10e-11!18;UBERON:0007005!2.10e-11!18;UBERON:0004139!2.10e-11!18;UBERON:0004291!2.10e-11!18;UBERON:0004535!8.54e-09!23;UBERON:0001009!8.54e-09!23;UBERON:0004872!9.44e-07!33|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.58e-10,3;UBERON:0000478,4.58e-10,3;UBERON:0000158,4.58e-10,3;UBERON:0006554,5.97e-10,18;UBERON:0001008,2.33e-09,19;UBERON:0005795,1.03e-07,4;UBERON:0000995,1.03e-07,4;UBERON:0002113,1.44e-07,14;UBERON:0003918,1.44e-07,14;UBERON:0011143,1.44e-07,14;UBERON:0005095,1.44e-07,14;UBERON:0007687,1.44e-07,14;UBERON:0001987,4.79e-07,2;UBERON:0003124,4.79e-07,2;UBERON:0004340,4.79e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.0116233931137,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,0,0.439372365468944,0.58328969722285,0,0,0,0,0,2.57259436035947,7.16333599846892,4.64104883049698,0,0,0,0,0,0,1.97773272513395,0.7104801149461,0,0,0,0,0,0,0.441737081903227,0,0,0,0,0.255374676170375,0.307213066512487,0,0,0,0.279182999001381,0,0,0.294628585473668,0.142371680799103,0.186399445825301,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,3.08977724289854,0.170430322578058,0,0,0,0,0,0,0,0,0,4.22480354960522,0,0.148442139064825,0,0,0,0.150722640552623,0.117588707135705,0.628332956648377,12.3597483867187,3.7595832799177,0.884610551949874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0.497627882440372,4.54900965180614,0,0,0.229902104433473,0,0,0,0,0,0,0,0.189106080167819,0,0,0.278047249225598,0.348252166522167,0,0,0,0,0,0.621377317606506,0.938104239924385,1.08037236876609,0.946978942340841,0.393528463494808,0.308534225774757,1.16266972375204,0.804820204198858,0.350296027101508,0.329119699826961,0.32833492815819,0.56748166682099,0.584799949701329,0.439100230582101,0.671032093801859,0,0,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0.605050573870028,0.667134131534611,2.66315876557583,0.474529061544512,5.92916237006439,4.77536896720512,9.35095418593409,3.70431765526328,0,0,0.199141273254367,0,0,0,0.814605311381257,0.969762435838129,1.05203729835478,4.11037491307672,9.29943932271494,17.2698600625512,24.5560356204383,0,0.166845105716094,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.325929952884052,0,0.234690248288502,0.167506257441816,0.238043640886014,1.56106918286239,0.157635144106191,0.221464689648775,0.159454768657487,1.63863314715738,1.72684981865896,2.16973587872267,0,0,0,0,0,0,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0.851640511249612,0,0,0.329940245945071,0,0,0,0,0.295301892880773,0,0.775284879504663,0.363533729477506,0,0.316036757935816,0,0,0.680879211507576,0,0,0.214337035031592,0,0.178368817602071,0,0.913394847343798,6.10146440965647,2.54198485036584,0.220528398054962,0.49465875882444,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0.258319646955462,0,0.117357238645754,0,0,0,0,0.632022241256357,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0.0897138566094757,0,0.579568782096571,18.2052001187647,0.549454872801795,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0.618105171716683,0.320919209591815,0,0.25347929989024,0,0.37456602987953,0.320125762024346,0.287177344778066,0,0.347652977834566,0.192909220463705,0.412085900803307,0.294397840268795,0.342869252385415,0.532427418478012,0.238436189947321,0.290692833264657,0.0941093804153306,0.169229215783353,0.182927972872773,0,0.543216455383447,0,0.118635018124174,0.394017929502254,0.409231043169689,0.154936841185966,0.578719832943424,0.249810577937946,0.467863216890817,0.429742108096597,0.382576664137687,0,0.231867835620421|short_description=p@chr11:54720687..54720702,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=206 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:54720687..54720702,+ | |||
|description=CAGE_peak_at_chr11:54720687..54720702,+ | |||
|id=chr11:54720687..54720702,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002494,6.49e-10,3;CL:0000737,6.49e-10,3;CL:0000746,6.49e-10,3;CL:0000513,6.49e-10,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003103!3.85e-12!43;UBERON:0007100!2.10e-11!18;UBERON:0000948!2.10e-11!18;UBERON:0005498!2.10e-11!18;UBERON:0004140!2.10e-11!18;UBERON:0009881!2.10e-11!18;UBERON:0004141!2.10e-11!18;UBERON:0003084!2.10e-11!18;UBERON:0007005!2.10e-11!18;UBERON:0004139!2.10e-11!18;UBERON:0004291!2.10e-11!18;UBERON:0004535!8.54e-09!23;UBERON:0001009!8.54e-09!23;UBERON:0004872!9.44e-07!33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.58e-10,3;UBERON:0000478,4.58e-10,3;UBERON:0000158,4.58e-10,3;UBERON:0006554,5.97e-10,18;UBERON:0001008,2.33e-09,19;UBERON:0005795,1.03e-07,4;UBERON:0000995,1.03e-07,4;UBERON:0002113,1.44e-07,14;UBERON:0003918,1.44e-07,14;UBERON:0011143,1.44e-07,14;UBERON:0005095,1.44e-07,14;UBERON:0007687,1.44e-07,14;UBERON:0001987,4.79e-07,2;UBERON:0003124,4.79e-07,2;UBERON:0004340,4.79e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.0116233931137,0,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56478268869608,0,0.439372365468944,0.58328969722285,0,0,0,0,0,2.57259436035947,7.16333599846892,4.64104883049698,0,0,0,0,0,0,1.97773272513395,0.7104801149461,0,0,0,0,0,0,0.441737081903227,0,0,0,0,0.255374676170375,0.307213066512487,0,0,0,0.279182999001381,0,0,0.294628585473668,0.142371680799103,0.186399445825301,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,3.08977724289854,0.170430322578058,0,0,0,0,0,0,0,0,0,4.22480354960522,0,0.148442139064825,0,0,0,0.150722640552623,0.117588707135705,0.628332956648377,12.3597483867187,3.7595832799177,0.884610551949874,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0.497627882440372,4.54900965180614,0,0,0.229902104433473,0,0,0,0,0,0,0,0.189106080167819,0,0,0.278047249225598,0.348252166522167,0,0,0,0,0,0.621377317606506,0.938104239924385,1.08037236876609,0.946978942340841,0.393528463494808,0.308534225774757,1.16266972375204,0.804820204198858,0.350296027101508,0.329119699826961,0.32833492815819,0.56748166682099,0.584799949701329,0.439100230582101,0.671032093801859,0,0,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0.605050573870028,0.667134131534611,2.66315876557583,0.474529061544512,5.92916237006439,4.77536896720512,9.35095418593409,3.70431765526328,0,0,0.199141273254367,0,0,0,0.814605311381257,0.969762435838129,1.05203729835478,4.11037491307672,9.29943932271494,17.2698600625512,24.5560356204383,0,0.166845105716094,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0.325929952884052,0,0.234690248288502,0.167506257441816,0.238043640886014,1.56106918286239,0.157635144106191,0.221464689648775,0.159454768657487,1.63863314715738,1.72684981865896,2.16973587872267,0,0,0,0,0,0,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0.851640511249612,0,0,0.329940245945071,0,0,0,0,0.295301892880773,0,0.775284879504663,0.363533729477506,0,0.316036757935816,0,0,0.680879211507576,0,0,0.214337035031592,0,0.178368817602071,0,0.913394847343798,6.10146440965647,2.54198485036584,0.220528398054962,0.49465875882444,0,0,0,0,0.582961673259701,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0.258319646955462,0,0.117357238645754,0,0,0,0,0.632022241256357,0.202725215290164,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0.0897138566094757,0,0.579568782096571,18.2052001187647,0.549454872801795,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0,0,0,0,0.618105171716683,0.320919209591815,0,0.25347929989024,0,0.37456602987953,0.320125762024346,0.287177344778066,0,0.347652977834566,0.192909220463705,0.412085900803307,0.294397840268795,0.342869252385415,0.532427418478012,0.238436189947321,0.290692833264657,0.0941093804153306,0.169229215783353,0.182927972872773,0,0.543216455383447,0,0.118635018124174,0.394017929502254,0.409231043169689,0.154936841185966,0.578719832943424,0.249810577937946,0.467863216890817,0.429742108096597,0.382576664137687,0,0.231867835620421 | |||
|short_description=p@chr11:54720687..54720702,+ | |||
}} |
Latest revision as of 02:33, 6 August 2015
Short description: | p@chr11:54720687..54720702, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:54720687..54720702, + |
Coexpression cluster: | MCL_coexpression_mm9:206 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiocyte | 6.49e-10 | 3 |
striated muscle cell | 6.49e-10 | 3 |
cardiac muscle cell | 6.49e-10 | 3 |
cardiac muscle myoblast | 6.49e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 4.58e-10 | 3 |
extraembryonic structure | 4.58e-10 | 3 |
membranous layer | 4.58e-10 | 3 |
urinary system structure | 5.97e-10 | 18 |
renal system | 2.33e-09 | 19 |
embryonic uterus | 1.03e-07 | 4 |
uterus | 1.03e-07 | 4 |
kidney | 1.44e-07 | 14 |
kidney mesenchyme | 1.44e-07 | 14 |
upper urinary tract | 1.44e-07 | 14 |
kidney rudiment | 1.44e-07 | 14 |
kidney field | 1.44e-07 | 14 |
placenta | 4.79e-07 | 2 |
chorion | 4.79e-07 | 2 |
allantois | 4.79e-07 | 2 |