FFCP PHASE1:Hg19::chr2:46612891..46612907,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2034 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=3374 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_BC015869_5end | |||
|cluster_id=chr2:46612891..46612907,+ | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_10_at_EPAS1_5end | |||
|id=chr2:46612891..46612907,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000349;4.29e-10;19!CL:0002541;1.36e-09;3!CL:0002615;1.30e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,3.69e-10,19;CL:0002541,1.28e-09,3;CL:0002615,1.18e-08,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.87e-10!14;UBERON:0000158!1.87e-10!14;UBERON:0000468!7.40e-09!659;UBERON:0000467!8.53e-08!625;UBERON:0004923!1.03e-07!57;UBERON:0000480!1.12e-07!626;UBERON:0000062!1.84e-07!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;5.35e-11;6!UBERON:0002358;5.35e-11;6!UBERON:0003684;5.35e-11;6!UBERON:0001178;5.35e-11;6!UBERON:0005631;5.92e-10;10!UBERON:0000158;5.92e-10;10!UBERON:0004457;6.27e-10;9!UBERON:0000042;6.27e-10;9!UBERON:0003124;1.36e-09;3!UBERON:0000920;1.36e-09;3!UBERON:0000478;2.74e-09;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.23e-14,14;UBERON:0000158,2.23e-14,14;UBERON:0003124,1.50e-13,7;UBERON:0004923,6.09e-11,66;UBERON:0003688,6.25e-11,6;UBERON:0002358,6.25e-11,6;UBERON:0003684,6.25e-11,6;UBERON:0001178,6.25e-11,6;UBERON:0000920,1.28e-09,3;UBERON:0000478,2.13e-09,24;UBERON:0004457,3.96e-07,12;UBERON:0000042,3.96e-07,12 | |||
|phase1_expression=1.45342703416445,5.99481466894753,2.81908808191942,5.00366491765652,1.34088328328186,0.872338524100369,0,0,0.261185628199839,0,0,0.218441372130172,0.527533956456907,0.123766352960047,0,0,0,0,0.975865597581014,0,0,0,0,0,0,0,0.0821005894499457,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0.411167888021826,0,0.28769239232215,0.256160706529101,0,0.344745680736619,0,0,0.752969358170419,1.36453075028923,0.674170453335254,0,0.320929027076094,0.639337125799041,0,0.199463657621632,0,0,0,0,0.251248665256743,1.0429658368404,0,0,0.368277635987565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,1.44575660953827,0,4.05570253090306,0,0.973269740605272,0,0.221729397462564,0,0,0,0.741568885568859,0,0,0,0,0,0,0,0,0.694281003215189,0,0.419499436209906,1.6507082516404,0,2.58416759169329,0.35576626268671,0.66944122552934,4.83395180530976,0,1.46437234528902,0.367663080345869,2.43042584364528,0.625098097988558,0,0,0,0,0.366403487860815,0,0,0,0.993943903390637,0.379891534993739,0.794455084879313,0,0,1.12135520028461,2.1349799145941,0.49333509683432,0,0.134710672069688,0.817309515567294,0.151357427644931,0,0,0,0,0,0,0.161872944368132,0,0,0.122834317311768,0.103325781175765,4.75201142912821,5.93440630268536,0,0,0,0,0,0,2.45190236639216,2.25357088359895,0.226864366320042,0.358779271377724,0,0,0.300091096084402,0.206105058476878,0,0.18611685633159,0.675105328965065,0.292311015483596,0.252433774244115,0.460249493211497,0,0,0.10075209822764,0.508681776931463,0.57978255948989,2.18196896472668,0,0,0,0,0,0,0,0,1.28648187638577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47008711385542,0,0.982827216677626,2.36315962672562,0,0.122988438543114,1.20097467208968,0.548751427043128,0,0.301586917234893,0.185176890317059,0,0,0,0,0,0.721832238805369,0,1.14152491340759,0,0,0,0,0.297262324577456,0.93733833986777,0.335964256397719,0.283550194484773,0.179117045405697,0,0,0,0.176096868026452,0,0.288239906833923,0.37872730027914,0,0,0,0,0,0,0,0,0,0,2.19761916788222,0,0,0.531876233169741,2.08014873822732,0.257207374262142,0,0,0.142977993658148,0.542621605391443,0,0,0.355391948742546,0,3.31583314765545,0,0.899756920638513,1.2162378064119,2.00902836572851,10.5416969741516,0.479249710983165,0,1.42636905040718,0.289562613335158,0.61642896765115,0,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,0,0,0.271265023699736,0.415941723061614,0.892144943985809,1.26161932027148,0.35142424497814,0,0,0,0,0,0.434418072340414,0,0,0,0,0.106727557803444,0.606255142892519,1.66435439510497,1.5119514666484,0.992431231275107,1.2276957863045,1.68396056659844,2.17836553734692,2.04682899626681,0.965123526861645,0,0,0.355123450626254,0.246381468041427,0,0.232420756919918,0,1.00253235151642,0.460404944679482,0.114814448164607,0.910455840033585,4.72047893853927,0.451199612907412,0,0,0,0,0,0.510281115829547,0.215915916102139,4.62681758070868,0,0,0,0,0.223874754722178,0,0,0,0,0,0.309123034943167,0,0,0,5.85054221432869,3.21367859688319,0.580024309752732,0.154048617114644,0,0,0.214840489736547,0.145016693914229,0,0,0.330569830721956,0.384380134730212,1.14851441245126,0.30347334256665,0.929691098594572,0,0,0,0,0,0.37064843820784,0,0,0,1.33441135746677,0.511795582622668,0.42793898803392,0,0,0.359744915166629,0.823611089208164,0,0.202182481573316,0,0,0,0,0,0.682499557039929,2.2624869112594,0,0,0.66343897524122,0,0.578775534266688,0,0,0,0,0,0.196498082026242,0,0.354761064070598,1.05553817648832,0.987884678879706,0,0,0.192444225451024,0,0,0.376575203107117,0.43050537267123,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846694330895531,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.879049075631364,0,0,0,6.20735660317994,13.0664459566361,0.921482106297696,0,0.140669416410513,3.22795244566427,0.494411622680279,0,1.9924798825107,0,0,0.102268682502155,0,3.42143546427988,0.0898683511473268,0.358042349351218,0,0.591860433821602,0,0,0,0.371072392647405,0,0.260427761085233,0.0874599999961957,0,0,0,0.236387681767936,0,0,0,0,0.361789315876224,0,0.110579259931225,0,0,0.10893846351899,0.139423744278603,0.692552326534174,1.70913083770502,0,0.718061155278177,0.108647371922008,16.2690591463279,4.8546724502987,40.5106429774162,0,0.156980256395025,0,0,0,0,0,0,0.210998064528027,1.14262965711403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252746318513952,0,0,0,0.661983911750998,0,0,1.13843818411917,0.832048038078832,0,0.489961987071888,0.0870592065804026,0.873633341210151,0.859930162358083,0.19351266257817,0.219267951258557,0,0.0969890164884194,0,0.90392296312213,0,0,0,0.195551382734803,0.160317640503067,0,0,0,0,0,0,0,0.471388069233591,0.135904206073614,0.104602846312333,0,0.288950589901519,0,0,0,0,0.262887354279314,0.279282401272254,0.229160424011684,0.717873024576814,0.798716001995964,0.429226048136571,0.223171457441873,0.134366944973453,0.360299883542404,0,0.0787831823072236,0,0.13480708770837,0.0984274815147488,0,0,0.272406812223151,0,0,0,0,0,0,0,0.551639951094387,0.104909176269996,0,0.896436696664224,0.191915197319445,0,0.662091970365432,0,0,0,0,0,0.082092520749339,0,0,0.293104467356165,0,0.129282956361551,0.13223260174269,0,0,2.88326013932776,1.72924735609633,2.48543433208317,0,0,0,0,0.544017803369474,0.2506898940227,0.306345576763462,1.31149052283922,0,0,0.244052529803926,0.3755727921195,0,0.221858103073705,0.0620964029413835,0,0.124980407962107,0,0.856396000634902,0,0,0,0,0,0,0.189403005275089,0.251567901752575,1.77962244319307,0.457680136793847,0.453692771289717,0,0.147855149989634,0,2.24901556081802,0.155262956876259,0,0.53168342911599,1.04349012362347,0.300515217994437,0.380805212168795,0,0,0.107410557042488,0,1.99047944349308,0,0.343395705182793,0.336749488765919,0,0.192619830407303,0.428883182749851,0.260994291965212,0.226705925512272,0,0,0,0.308801447160972,0,0.530067437837643,0,0.168942440653073,0,0,0,0,0,0,0,3.93131818615695,0.983091635014877,0,0,0,0.516644938982447,0,0.184105950251841,0.699397538597222,1.86623178009892,0,0,0,0,0,0,0,0,0.318004350653419,0,0,1.41070377476274,6.7374005017704,0,0,0,0.205116364240755,0,0,0.161475645631851,0,0,0,0.183428598521679,0.577628330751691,1.52552838186867,0,0,0.526472298444801,0,0,0.261906694481422,1.14640342257068,0,0.135075169236789,0,0,0.0634158101939068,0,0,1.48863353516788,0,0.127762427639595,0,0,0,0.227662191351298,1.68534503309014,0,2.05785611324902,0.0679697329768317,0.0657727735628491,0.118193840883968,0,0.156986185701028,0.314231179832004,0,0,0.431855182437243,1.43325506366115,0.214429632529969,0.158013611732727,0,0,0,0.207216164163037,0.3414369541879,0.691259661814092,0,0,0.170426809518315,0,0.22910686854405,0.62041277132864,0,0.782988022584546,0.098150233615243,0,3.23714418593947,0.205325613712494,0,0,0,0,0,0,0,0.150962843566674,0.154348316215889,0,0,0.245148321753905,0,0.196308467114945,0,0,0.849635573439084,0.187967835959707,0.128915775947154,0,0.178553938605658,0.352894871715692,0.0802413666891683,0,0,0.143339583151451,0,0,0,0,1.85997509083376,0,0,0.126166424835079,0,0,0,0,0,0,0.151557396436479,0.267964130156178,0,0,0,0.23806443146374,0.0645889098360061,0,0,0.445530107947154,0.404234377916439,0,0,0,0.430333232356058,0,0.325613074443898,0.426909383510862,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |||
|short_description=p10@EPAS1 | |||
}} |
Latest revision as of 10:45, 17 September 2015
Short description: | p10@EPAS1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_EPAS1_5end |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | 0bp_to_BC015869_5end |
EntrezGene: | EPAS1 |
HGNC: | 3374 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 3.69e-10 | 19 |
chorionic membrane mesenchymal stem cell | 1.28e-09 | 3 |
adipocyte of omentum tissue | 1.18e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.23e-14 | 14 |
membranous layer | 2.23e-14 | 14 |
chorion | 1.50e-13 | 7 |
organ component layer | 6.09e-11 | 66 |
omentum | 6.25e-11 | 6 |
peritoneum | 6.25e-11 | 6 |
abdominal cavity | 6.25e-11 | 6 |
visceral peritoneum | 6.25e-11 | 6 |
egg chorion | 1.28e-09 | 3 |
extraembryonic structure | 2.13e-09 | 24 |
cavity lining | 3.96e-07 | 12 |
serous membrane | 3.96e-07 | 12 |