FFCP PHASE1:Hg19::chr2:45396649..45396671,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:45396649..45396671,+ | |||
|description=CAGE_peak_at_chr2:45396649..45396671,+ | |||
|id=chr2:45396649..45396671,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002602;7.05e-18;2!CL:0000138;1.94e-12;6!CL:0002564;9.05e-12;3!CL:0000228;3.00e-09;1!CL:0002372;3.00e-09;1!CL:0000153;1.83e-08;9!CL:0000447;1.83e-08;9!CL:0002595;3.03e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002602,7.07e-18,2;CL:0000058,2.67e-12,6;CL:0000138,2.67e-12,6;CL:0002564,1.04e-11,3;CL:0000228,2.55e-09,1;CL:0002372,2.55e-09,1;CL:0000153,2.26e-08,9;CL:0000447,2.26e-08,9;CL:0002595,2.85e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0008801;1.16e-09;1!UBERON:0008425;1.16e-09;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000165!1.48e-08!28;UBERON:0000930!1.48e-08!28;UBERON:0000481!2.00e-07!347;UBERON:0000161!2.39e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;1.18e-26;5!UBERON:0002216;1.18e-26;5!UBERON:0011134;1.18e-26;5!UBERON:0002209;1.18e-26;5!UBERON:0002213;1.18e-26;5!UBERON:0007844;1.18e-26;5!UBERON:0011138;1.18e-26;5!UBERON:0001130;1.18e-26;5!UBERON:0001066;1.18e-26;5!UBERON:0001468;1.18e-26;5!UBERON:0006444;7.05e-18;2!UBERON:0001995;7.05e-18;2!UBERON:0004715;7.05e-18;2!UBERON:0004905;9.35e-17;8!UBERON:0000982;9.35e-17;8!UBERON:0004770;9.35e-17;8!UBERON:0000075;1.15e-12;16!UBERON:0002418;3.12e-12;3!UBERON:0004755;3.12e-12;3!UBERON:0002242;9.05e-12;3!UBERON:0004765;6.84e-11;26!UBERON:0001831;1.16e-09;1!UBERON:0001567;1.16e-09;1!UBERON:0001434;1.80e-09;36!UBERON:0003834;3.03e-07;5!UBERON:0001533;3.03e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,1.40e-26,5;UBERON:0002216,1.40e-26,5;UBERON:0011134,1.40e-26,5;UBERON:0002209,1.40e-26,5;UBERON:0002213,1.40e-26,5;UBERON:0005856,1.40e-26,5;UBERON:0005866,1.40e-26,5;UBERON:0005863,1.40e-26,5;UBERON:0007844,1.40e-26,5;UBERON:0011138,1.40e-26,5;UBERON:0001130,1.40e-26,5;UBERON:0001066,1.40e-26,5;UBERON:0001468,1.40e-26,5;UBERON:0006444,7.07e-18,2;UBERON:0001995,7.07e-18,2;UBERON:0004715,7.07e-18,2;UBERON:0004905,1.04e-16,8;UBERON:0000982,1.04e-16,8;UBERON:0004770,1.04e-16,8;UBERON:0000075,1.43e-12,16;UBERON:0002418,3.13e-12,3;UBERON:0004755,3.13e-12,3;UBERON:0002242,1.04e-11,3;UBERON:0003068,1.04e-11,3;UBERON:0002328,1.04e-11,3;UBERON:0004880,1.04e-11,3;UBERON:0001831,1.12e-09,1;UBERON:0001567,1.12e-09,1;UBERON:0008801,1.12e-09,1;UBERON:0003834,2.85e-07,5;UBERON:0001533,2.85e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,3.21792517696121,3.97676850873499,0,0,0,0,0,0.408001382488506,0,0,0,0,0,0,0,0,0,0,0,0.90361775633475,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80719576192283,1.00267582127178,1.01392563272577,0,0,0,0.221729397462564,0,0.0654895377488563,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0.709336764396714,0,0,0,0.311211035399766,0.404132016209064,0,0.302714855289863,0,0,0.624320153660641,0,0,0.117434498643765,0,0,0.816616685019573,0.245668634623536,2.06651562351531,0,0.494533858557114,0,0,0.168336113954066,0,0.831192346452549,0,0.30648779579902,1.05166641234618,0,0,0,0.423863802319124,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.621984346622316,0.144119953416961,0,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.599837947092342,0,0,0,0.239624855491583,0,1.42636905040718,0,0.410952645100767,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,2.00068208423871,1.35632511849868,0.207970861530807,0.356857977594324,0,0.35142424497814,0,0,0,0,0.184369168541703,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246381468041427,0,0,0,0,0,0.229628896329213,0,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193341436584244,0.616194468458578,0.15350367472613,0.275673144969061,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0.532306030317022,0.869932992075073,0,0,0.744316738719335,0,0.190630193923825,0,0.855877976067841,1.27281299170375,0,0,0,0.117812402345686,0,0,0,0,1.46228093778771,0,0.136499911407986,0,0,0,0,1.31535265576129,0,0,0,0,0,0,0,0,0,0.211107635297664,0.658589785919804,0,0,0.192444225451024,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.796991953004279,0,0,0,0,0,0.0898683511473268,0,0,0.0986434056369336,0,0,0,0,0,0,2.18649999990489,0,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0.438770794307945,0,0.697118721393016,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0.0979923974143777,0.174118413160805,0.17472666824203,0,0,0,0,0,0,0.225980740780532,0.137041924646751,0,0,0,0.400794101257669,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196854963029498,0,0.795229689809303,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0.383830394638891,0.714695326373367,0,0,1.08599920350743,0.864221491201268,0.326587360109409,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0.171086837884329,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0.298509605773748,0,0,1.32582103692562,0.50313580350515,2.66943366478961,0,0.604923695052956,0.621748802331122,0,0,0,0,2.90294345488599,0,0,0,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179088841081487,0,0,0,0.192914038270915,0.337884881306145,0,1.72715170865599,0,0,0,0,0,0,0.737318726261158,0,0,0,0,0,0.184105950251841,0,0,0.255788742607303,0,0,0.218419276384028,0,0,0,0,0,0,0.80057074828547,0,0,0.0642292250964595,0,0,0,0,0.0691572524642179,0,0,0,0.11796972334774,0,0,0,0,0.198916222116275,0,0,0.781514011233092,0,0,0.147856086217045,0.0675375846183947,0,0,0,0,2.19303106742873,0.496211178389294,0,0.127762427639595,0,0,0.606965604236632,0.682986574053893,0,0,0,0.0679697329768317,0,0,0.111231401892069,0.156986185701028,0,0,0,0,0,0,0,0,0,1.60342272946051,0.828864656652147,1.87790324803345,0.691259661814092,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,1.1598144313382,0.485710993059139,0,0,0,0,0,0,0,0,0.470317296361523,0,0.235676547101626,0,0,0,0,0,0,0,0,0,0.160482733378337,0,0,0,0,0,0,0.5290268405154,0,1.38652688589425,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23806443146374,0,0.0620747142958579,0,0,0,0,0.684466602170562,0.202056159043763,0.143444410785353,0,0,0.106727345877715,0,0,0,0.122241444182866,0,0,0.402547587182052,0 | |||
|short_description=p@chr2:45396649..45396671,+ | |||
}} |
Latest revision as of 10:25, 29 July 2015
Short description: | p@chr2:45396649..45396671, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:45396649..45396671, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
annulus pulposus cell | 7.07e-18 | 2 |
chondroblast | 2.67e-12 | 6 |
chondrocyte | 2.67e-12 | 6 |
nucleus pulposus cell of intervertebral disc | 1.04e-11 | 3 |
multinucleate cell | 2.55e-09 | 1 |
myotube | 2.55e-09 | 1 |
GAG secreting cell | 2.26e-08 | 9 |
carbohydrate secreting cell | 2.26e-08 | 9 |
smooth muscle cell of the subclavian artery | 2.85e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
intervertebral cartilage | 1.40e-26 | 5 |
symphysis | 1.40e-26 | 5 |
nonsynovial joint | 1.40e-26 | 5 |
fibrous joint | 1.40e-26 | 5 |
cartilaginous joint | 1.40e-26 | 5 |
developing mesenchymal condensation | 1.40e-26 | 5 |
pre-cartilage condensation | 1.40e-26 | 5 |
cartilaginous condensation | 1.40e-26 | 5 |
cartilage element | 1.40e-26 | 5 |
post-cranial axial skeletal system | 1.40e-26 | 5 |
vertebral column | 1.40e-26 | 5 |
intervertebral disk | 1.40e-26 | 5 |
intervertebral joint | 1.40e-26 | 5 |
annulus fibrosus | 7.07e-18 | 2 |
fibrocartilage | 7.07e-18 | 2 |
annulus fibrosus disci intervertebralis | 7.07e-18 | 2 |
articulation | 1.04e-16 | 8 |
skeletal joint | 1.04e-16 | 8 |
articular system | 1.04e-16 | 8 |
subdivision of skeletal system | 1.43e-12 | 16 |
cartilage tissue | 3.13e-12 | 3 |
skeletal tissue | 3.13e-12 | 3 |
nucleus pulposus | 1.04e-11 | 3 |
axial mesoderm | 1.04e-11 | 3 |
notochord | 1.04e-11 | 3 |
chordamesoderm | 1.04e-11 | 3 |
parotid gland | 1.12e-09 | 1 |
cheek | 1.12e-09 | 1 |
parotid gland primordium | 1.12e-09 | 1 |
thoracic segment blood vessel | 2.85e-07 | 5 |
subclavian artery | 2.85e-07 | 5 |