FFCP PHASE1:Mm9::chr11:104171701..104171731,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=596|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr11:104171701..104171731,+|id=chr11:104171701..104171731,+|ontology_enrichment_celltype=CL:0000117!5.64e-22!23;CL:0000337!5.64e-22!23;CL:0000540!2.02e-17!33;CL:0000047!2.02e-17!33;CL:0000031!2.02e-17!33;CL:0000404!2.02e-17!33;CL:0002319!7.52e-14!43;CL:0000221!2.79e-13!44;CL:0000133!2.79e-13!44;CL:0000393!4.22e-13!39;CL:0000211!4.22e-13!39;CL:0000055!2.18e-10!50|ontology_enrichment_celltype_v019_2=CL:0000117,3.94e-44,23;CL:0000337,3.94e-44,23;CL:0000540,7.59e-30,33;CL:0000047,7.59e-30,33;CL:0000031,7.59e-30,33;CL:0000404,7.59e-30,33;CL:0000393,8.75e-25,39;CL:0000211,8.75e-25,39;CL:0002319,3.42e-22,43;CL:0000221,1.28e-21,44;CL:0000133,1.28e-21,44;CL:0002612,9.65e-13,3;CL:0002321,2.00e-12,70;CL:0000120,6.55e-12,3;CL:0002614,1.09e-11,3;CL:0000723,7.96e-09,91;CL:0000048,7.96e-09,91;CL:0000034,4.40e-08,97;CL:0002611,6.31e-08,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.18e-26!73;UBERON:0005743!1.18e-26!73;UBERON:0000073!2.15e-25!75;UBERON:0001016!2.15e-25!75;UBERON:0001049!1.94e-22!52;UBERON:0005068!1.94e-22!52;UBERON:0006241!1.94e-22!52;UBERON:0007135!1.94e-22!52;UBERON:0002020!6.35e-22!34;UBERON:0000955!1.67e-20!50;UBERON:0006238!1.67e-20!50;UBERON:0004121!1.73e-20!102;UBERON:0000924!1.73e-20!102;UBERON:0006601!1.73e-20!102;UBERON:0002346!2.72e-20!71;UBERON:0003075!2.72e-20!71;UBERON:0007284!2.72e-20!71;UBERON:0002616!1.25e-19!49;UBERON:0000033!6.65e-18!63;UBERON:0002791!4.25e-17!29;UBERON:0003528!4.25e-17!29;UBERON:0001893!4.25e-17!29;UBERON:0003080!1.09e-14!40;UBERON:0002780!3.19e-14!39;UBERON:0001890!3.19e-14!39;UBERON:0006240!3.19e-14!39;UBERON:0003056!2.54e-13!49;UBERON:0000956!1.94e-10!21;UBERON:0001869!1.94e-10!21;UBERON:0000203!1.94e-10!21;UBERON:0007811!3.73e-09!86;UBERON:0003076!9.59e-09!12;UBERON:0003057!9.59e-09!12;UBERON:0002420!2.69e-08!8;UBERON:0007245!2.69e-08!8;UBERON:0010009!2.69e-08!8;UBERON:0010011!2.69e-08!8;UBERON:0000454!2.69e-08!8;UBERON:0000153!8.71e-08!94;UBERON:0002619!1.14e-07!17;UBERON:0002240!6.72e-07!6;UBERON:0005174!6.72e-07!6;UBERON:0001137!6.72e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.89e-22,34;UBERON:0001017,1.87e-21,73;UBERON:0001016,8.73e-21,75;UBERON:0000073,1.74e-19,54;UBERON:0001948,5.39e-19,5;UBERON:0002315,5.39e-19,5;UBERON:0002420,1.53e-16,8;UBERON:0007245,1.53e-16,8;UBERON:0010009,1.53e-16,8;UBERON:0010011,1.53e-16,8;UBERON:0000454,1.53e-16,8;UBERON:0001049,6.25e-16,52;UBERON:0005068,6.25e-16,52;UBERON:0006241,6.25e-16,52;UBERON:0007135,6.25e-16,52;UBERON:0002240,8.40e-16,6;UBERON:0005174,8.40e-16,6;UBERON:0001137,8.40e-16,6;UBERON:0004121,1.24e-15,95;UBERON:0000924,1.24e-15,95;UBERON:0006601,1.24e-15,95;UBERON:0002257,9.65e-13,3;UBERON:0002346,2.22e-12,64;UBERON:0003075,2.22e-12,64;UBERON:0007284,2.22e-12,64;UBERON:0002038,1.09e-11,3;UBERON:0009663,1.09e-11,3;UBERON:0009661,1.09e-11,3;UBERON:0000125,1.09e-11,3;UBERON:0002308,1.09e-11,3;UBERON:0003528,1.83e-11,29;UBERON:0002791,1.83e-11,29;UBERON:0001893,1.83e-11,29;UBERON:0003076,3.68e-11,12;UBERON:0003057,3.68e-11,12;UBERON:0010371,1.76e-10,73;UBERON:0000955,1.51e-09,47;UBERON:0006238,1.51e-09,47;UBERON:0002950,6.91e-09,4;UBERON:0001891,6.91e-09,4;UBERON:0009616,6.91e-09,4;UBERON:0010286,6.91e-09,4;UBERON:0002616,3.53e-08,46;UBERON:0002780,4.27e-08,39;UBERON:0001890,4.27e-08,39;UBERON:0006240,4.27e-08,39;UBERON:0002256,6.31e-08,2;UBERON:0003080,7.49e-08,40;UBERON:0010314,1.08e-07,92;UBERON:0000369,1.77e-07,5;UBERON:0002435,1.77e-07,5;UBERON:0000204,1.77e-07,5;UBERON:0010082,1.77e-07,5|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,1.01158230429799,4.23192783417626,1.90149421051854,0,0,0,0,0,0.299600110518405,0.384218305321555,0.725827286159344,3.37514845829227,0.841299845405528,1.14260393761521,1.10434270475807,0.489963196859816,1.53352753629178,0.919218786610021,1.10115880999389,1.0214987046815,0.921639199537461,1.58263545276233,3.65950574409639,0.52091337055676,1.11673199600552,2.25105044012672,1.37518422999129,5.89257170947335,4.12877874317399,2.23679334990361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.29688427812965,0,0,0,0.301445281105245,0.117588707135705,0,0,0,0,0,0,0,0,0.878342391034642,6.0739544975902,0,0,0,0,0.299581278809645,0.457500602818626,1.38219787324151,0.347648640384553,1.27857728665165,0.20778804455956,0.486723789203273,0,0,0,0,0.130120442962704,0,0.360124259610698,0,0.0680364991513279,0.384341160854549,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0.219550115291051,0.268412837520744,0.630869845692382,2.26390147234426,0,0,0,0,0.128867461322093,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0,0,0.238043640886014,0,0,0,0.15945476865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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=596 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:104171701..104171731,+ | |||
|description=CAGE_peak_at_chr11:104171701..104171731,+ | |||
|id=chr11:104171701..104171731,+ | |||
|ontology_enrichment_celltype=CL:0000117!5.64e-22!23;CL:0000337!5.64e-22!23;CL:0000540!2.02e-17!33;CL:0000047!2.02e-17!33;CL:0000031!2.02e-17!33;CL:0000404!2.02e-17!33;CL:0002319!7.52e-14!43;CL:0000221!2.79e-13!44;CL:0000133!2.79e-13!44;CL:0000393!4.22e-13!39;CL:0000211!4.22e-13!39;CL:0000055!2.18e-10!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.94e-44,23;CL:0000337,3.94e-44,23;CL:0000540,7.59e-30,33;CL:0000047,7.59e-30,33;CL:0000031,7.59e-30,33;CL:0000404,7.59e-30,33;CL:0000393,8.75e-25,39;CL:0000211,8.75e-25,39;CL:0002319,3.42e-22,43;CL:0000221,1.28e-21,44;CL:0000133,1.28e-21,44;CL:0002612,9.65e-13,3;CL:0002321,2.00e-12,70;CL:0000120,6.55e-12,3;CL:0002614,1.09e-11,3;CL:0000723,7.96e-09,91;CL:0000048,7.96e-09,91;CL:0000034,4.40e-08,97;CL:0002611,6.31e-08,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.18e-26!73;UBERON:0005743!1.18e-26!73;UBERON:0000073!2.15e-25!75;UBERON:0001016!2.15e-25!75;UBERON:0001049!1.94e-22!52;UBERON:0005068!1.94e-22!52;UBERON:0006241!1.94e-22!52;UBERON:0007135!1.94e-22!52;UBERON:0002020!6.35e-22!34;UBERON:0000955!1.67e-20!50;UBERON:0006238!1.67e-20!50;UBERON:0004121!1.73e-20!102;UBERON:0000924!1.73e-20!102;UBERON:0006601!1.73e-20!102;UBERON:0002346!2.72e-20!71;UBERON:0003075!2.72e-20!71;UBERON:0007284!2.72e-20!71;UBERON:0002616!1.25e-19!49;UBERON:0000033!6.65e-18!63;UBERON:0002791!4.25e-17!29;UBERON:0003528!4.25e-17!29;UBERON:0001893!4.25e-17!29;UBERON:0003080!1.09e-14!40;UBERON:0002780!3.19e-14!39;UBERON:0001890!3.19e-14!39;UBERON:0006240!3.19e-14!39;UBERON:0003056!2.54e-13!49;UBERON:0000956!1.94e-10!21;UBERON:0001869!1.94e-10!21;UBERON:0000203!1.94e-10!21;UBERON:0007811!3.73e-09!86;UBERON:0003076!9.59e-09!12;UBERON:0003057!9.59e-09!12;UBERON:0002420!2.69e-08!8;UBERON:0007245!2.69e-08!8;UBERON:0010009!2.69e-08!8;UBERON:0010011!2.69e-08!8;UBERON:0000454!2.69e-08!8;UBERON:0000153!8.71e-08!94;UBERON:0002619!1.14e-07!17;UBERON:0002240!6.72e-07!6;UBERON:0005174!6.72e-07!6;UBERON:0001137!6.72e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.89e-22,34;UBERON:0001017,1.87e-21,73;UBERON:0001016,8.73e-21,75;UBERON:0000073,1.74e-19,54;UBERON:0001948,5.39e-19,5;UBERON:0002315,5.39e-19,5;UBERON:0002420,1.53e-16,8;UBERON:0007245,1.53e-16,8;UBERON:0010009,1.53e-16,8;UBERON:0010011,1.53e-16,8;UBERON:0000454,1.53e-16,8;UBERON:0001049,6.25e-16,52;UBERON:0005068,6.25e-16,52;UBERON:0006241,6.25e-16,52;UBERON:0007135,6.25e-16,52;UBERON:0002240,8.40e-16,6;UBERON:0005174,8.40e-16,6;UBERON:0001137,8.40e-16,6;UBERON:0004121,1.24e-15,95;UBERON:0000924,1.24e-15,95;UBERON:0006601,1.24e-15,95;UBERON:0002257,9.65e-13,3;UBERON:0002346,2.22e-12,64;UBERON:0003075,2.22e-12,64;UBERON:0007284,2.22e-12,64;UBERON:0002038,1.09e-11,3;UBERON:0009663,1.09e-11,3;UBERON:0009661,1.09e-11,3;UBERON:0000125,1.09e-11,3;UBERON:0002308,1.09e-11,3;UBERON:0003528,1.83e-11,29;UBERON:0002791,1.83e-11,29;UBERON:0001893,1.83e-11,29;UBERON:0003076,3.68e-11,12;UBERON:0003057,3.68e-11,12;UBERON:0010371,1.76e-10,73;UBERON:0000955,1.51e-09,47;UBERON:0006238,1.51e-09,47;UBERON:0002950,6.91e-09,4;UBERON:0001891,6.91e-09,4;UBERON:0009616,6.91e-09,4;UBERON:0010286,6.91e-09,4;UBERON:0002616,3.53e-08,46;UBERON:0002780,4.27e-08,39;UBERON:0001890,4.27e-08,39;UBERON:0006240,4.27e-08,39;UBERON:0002256,6.31e-08,2;UBERON:0003080,7.49e-08,40;UBERON:0010314,1.08e-07,92;UBERON:0000369,1.77e-07,5;UBERON:0002435,1.77e-07,5;UBERON:0000204,1.77e-07,5;UBERON:0010082,1.77e-07,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,1.01158230429799,4.23192783417626,1.90149421051854,0,0,0,0,0,0.299600110518405,0.384218305321555,0.725827286159344,3.37514845829227,0.841299845405528,1.14260393761521,1.10434270475807,0.489963196859816,1.53352753629178,0.919218786610021,1.10115880999389,1.0214987046815,0.921639199537461,1.58263545276233,3.65950574409639,0.52091337055676,1.11673199600552,2.25105044012672,1.37518422999129,5.89257170947335,4.12877874317399,2.23679334990361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.29688427812965,0,0,0,0.301445281105245,0.117588707135705,0,0,0,0,0,0,0,0,0.878342391034642,6.0739544975902,0,0,0,0,0.299581278809645,0.457500602818626,1.38219787324151,0.347648640384553,1.27857728665165,0.20778804455956,0.486723789203273,0,0,0,0,0.130120442962704,0,0.360124259610698,0,0.0680364991513279,0.384341160854549,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0.219550115291051,0.268412837520744,0.630869845692382,2.26390147234426,0,0,0,0,0.128867461322093,0,0,0,0.474529061544512,0,0,0,0,0,0,0,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0.169745085775188,0,0,0.238043640886014,0,0,0,0.159454768657487,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0,0.321101179975584,0.468846746368813,0,0.757412781613119,0.315508219416257,0,0.430846795465598,0,0.222798674082394,0,0.404810701674894,0,0,1.28528526568723,0.141940085208269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0.0603129249281559,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0.621339313086926,0,0,0,0,0.258319646955462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221985953374065,0,0,0,0,0,0,0,0,0.920650473014354,0.572895513439397,0.859265911718438,0.685082519770642,0.755393897389701,1.35004500046361,0.45032120322422,0.906284817968409,0,0.103787347584177,0,0.512200817262403,0,0,0.367687016900028,0.44449345560323,0,0.64183841918363,0.252697211763798,0.25347929989024,0.377252682772152,0.187283014939765,0.320125762024346,0.17230640686684,0,0.231768651889711,0.192909220463705,0.412085900803307,0,0.685738504770831,0.177475806159338,0.238436189947321,0,0.282328141245992,0.25384382367503,0.73171189149109,0.526139422875686,0.543216455383447,0.561142271657738,0.237270036248348,0.394017929502254,0.409231043169689,0.154936841185966,0.192906610981141,1.49886346762768,0,0.429742108096597,0.191288332068843,0.220591419119515,0 | |||
|short_description=p@chr11:104171701..104171731,+ | |||
}} |
Latest revision as of 06:46, 5 August 2015
Short description: | p@chr11:104171701..104171731, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:104171701..104171731, + |
Coexpression cluster: | MCL_coexpression_mm9:596 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.94e-44 | 23 |
neuroblast (sensu Vertebrata) | 3.94e-44 | 23 |
neuron | 7.59e-30 | 33 |
neuronal stem cell | 7.59e-30 | 33 |
neuroblast | 7.59e-30 | 33 |
electrically signaling cell | 7.59e-30 | 33 |
electrically responsive cell | 8.75e-25 | 39 |
electrically active cell | 8.75e-25 | 39 |
neural cell | 3.42e-22 | 43 |
ectodermal cell | 1.28e-21 | 44 |
neurectodermal cell | 1.28e-21 | 44 |
neuron of the ventral spinal cord | 9.65e-13 | 3 |
embryonic cell | 2.00e-12 | 70 |
granule cell | 6.55e-12 | 3 |
neuron of the substantia nigra | 1.09e-11 | 3 |
somatic stem cell | 7.96e-09 | 91 |
multi fate stem cell | 7.96e-09 | 91 |
stem cell | 4.40e-08 | 97 |
neuron of the dorsal spinal cord | 6.31e-08 | 2 |