FFCP PHASE1:Mm9::chr10:80164624..80164644,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=208228|HGNC=|UniProt=Q8BSU7|association_with_transcript=-59bp_to_ENSMUST00000003438,NM_172457,uc007geh.1,uc007gei.1_5end|description=CAGE_peak_3_at_Mob3a_5end|id=chr10:80164624..80164644,-|ontology_enrichment_celltype=CL:0000117!8.63e-10!23;CL:0000337!8.63e-10!23;CL:0002319!1.45e-07!43;CL:0000221!3.47e-07!44;CL:0000133!3.47e-07!44;CL:0000540!3.65e-07!33;CL:0000047!3.65e-07!33;CL:0000031!3.65e-07!33;CL:0000404!3.65e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,4.68e-13,23;CL:0000337,4.68e-13,23;CL:0002609,6.92e-11,6;CL:0002319,5.49e-08,43;CL:0000540,7.35e-08,33;CL:0000047,7.35e-08,33;CL:0000031,7.35e-08,33;CL:0000404,7.35e-08,33;CL:0000221,1.07e-07,44;CL:0000133,1.07e-07,44;CL:0000393,4.97e-07,39;CL:0000211,4.97e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!4.19e-11!94;UBERON:0007811!2.59e-09!86;UBERON:0002370!1.54e-07!23;UBERON:0000974!1.54e-07!23;UBERON:0004807!1.54e-07!23;UBERON:0005058!1.54e-07!23;UBERON:0003351!1.54e-07!23;UBERON:0009113!1.54e-07!23;UBERON:0003295!1.54e-07!23;UBERON:0009722!1.54e-07!23;UBERON:0005562!1.54e-07!23;UBERON:0007690!1.54e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.75e-14,23;UBERON:0000974,3.75e-14,23;UBERON:0004807,3.75e-14,23;UBERON:0005058,3.75e-14,23;UBERON:0003351,3.75e-14,23;UBERON:0009113,3.75e-14,23;UBERON:0003295,3.75e-14,23;UBERON:0009722,3.75e-14,23;UBERON:0005562,3.75e-14,23;UBERON:0007690,3.75e-14,23;UBERON:0006562,2.24e-13,24;UBERON:0003408,2.24e-13,24;UBERON:0001557,2.24e-13,24;UBERON:0001042,2.24e-13,24;UBERON:0008814,2.24e-13,24;UBERON:0009145,2.24e-13,24;UBERON:0000072,2.12e-11,27;UBERON:0004177,2.58e-10,29;UBERON:0005057,2.58e-10,29;UBERON:0000153,1.78e-09,43;UBERON:0001049,4.22e-09,52;UBERON:0005068,4.22e-09,52;UBERON:0006241,4.22e-09,52;UBERON:0007135,4.22e-09,52;UBERON:0000077,5.43e-09,35;UBERON:0002616,6.92e-09,46;UBERON:0002780,8.51e-09,39;UBERON:0001890,8.51e-09,39;UBERON:0006240,8.51e-09,39;UBERON:0000955,1.38e-08,47;UBERON:0006238,1.38e-08,47;UBERON:0000073,1.50e-08,54;UBERON:0007811,1.51e-08,36;UBERON:0003080,1.85e-08,40;UBERON:0001017,7.24e-08,73;UBERON:0002020,1.65e-07,34;UBERON:0001016,1.75e-07,75;UBERON:0003528,4.30e-07,29;UBERON:0002791,4.30e-07,29;UBERON:0001893,4.30e-07,29;UBERON:0002346,4.37e-07,64;UBERON:0003075,4.37e-07,64;UBERON:0007284,4.37e-07,64;UBERON:0002390,6.34e-07,45;UBERON:0003061,6.34e-07,45;UBERON:0003056,6.98e-07,49|phase1_expression=0.160148847104794,0,0,0.30246421130683,0,0.16787927191189,0,1.42035655785734,0.140788722151667,0.936258105287974,0.513653904676515,0.478632953972018,0.513602189793617,1.22388563386596,0.333109761815663,0.202475267389826,0,0.157731082679119,0.274228867211478,0.84877930359606,0.680346321208558,0.496454756004426,0.522399578277871,0,0.45881856213434,0.57423196411502,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0,0.166234645358492,0,0.418531630736908,0,0.523523743973798,1.17646297606203,0.683045484958446,0.485510353031154,0.377690453926732,0.202753862439029,0.550640256485045,3.12956537739216,1.30815093828268,0.439372365468944,0,0.279972843250725,0,0.503347818173209,0,1.00828139742739,1.28629718017973,0.286533439938757,0,2.22548106945558,2.11596391708813,1.26766280701236,1.0165335962074,0,0.899899717281399,0.988866362566974,1.4209602298922,0.599200221036809,1.15265491596466,3.21437798156281,3.51015439662396,2.52389953621658,0.571301968807607,1.10434270475807,1.71487118900936,3.25874601462004,4.5960939330501,0,0.766124028511126,0.614426133024974,2.50583946687368,3.11057988248193,3.12548022334056,0.558365998002762,1.12552522006336,0.61119299110724,0.589257170947335,0.711858403995515,1.3047961207771,0.681535739998656,0.604572480854284,0.289864488701678,0,0,0,0,0,0.280888840263504,0.340860645156116,0.519572009205738,0,0.14084341977668,1.28326477414318,0,0,0.216491041011214,0.253359865475099,0,0.34255163915718,0.776813650941515,0,0.346970653532272,0.304465478312141,1.15307748628029,0.904335843315735,0,0,0.741584903203122,0,0,0.323533699894818,0.441683036920787,0,0,0,0.41889341362691,0.510914110417183,0.838705871541442,0,0.381210681219194,0.299581278809645,0,2.76439574648302,0.173824320192276,0,1.0389402227978,0.486723789203273,0.509196819251581,0.373220911830279,0.252722758433675,0.420883711772948,0.520481771850815,1.14951052216736,0.900310649026746,0.452114453507145,0.476255494059295,0.512454881139399,0.468508622798644,0,0.862271971731369,0.378212160335639,1.23165786914764,1.53437012699302,1.11218899690239,0.696504333044333,0.205782136407943,0.59710280045548,0,0,0.284163499395593,0.414251545071004,0.234526059981096,0.540186184383045,0.23674473558521,0,0.154267112887378,0.232533944750408,0.268273401399619,0.350296027101508,0.493679549740441,0,0.0810688095458557,0,0,0,0.420579897128254,2.36680608472354,0,0,0.639864751605702,0.232236671860439,0.257734922644187,0.201683524623343,0,0.190225626112559,0,0,0,0.198956472041151,0.58489226135736,0.898819408654221,0.216138049874694,0,0.189667900953082,0.114248512609729,1.1270773567308,0.610953983535943,0.193952487167626,0.0701358198903186,0.442655759869801,0.147610147979602,0.156998727841375,0.123397163921801,0,0.500535317148282,0.982794975566015,0,0.405720242777006,0.241177159752417,0.25462585178142,0.287696137450811,0,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0.37898282354097,0.488894929326078,0.339490171550376,0.469380496577004,0.502518772325447,0.476087281772027,0.390267295715598,0.472905432318573,0.221464689648775,0.159454768657487,0,0.345369963731791,0,0,0.54390568381871,0,0,0.321101179975584,0.117211686592203,0.327869890753351,0,0,0.780877488593277,0.430846795465598,0.477937595905104,0.222798674082394,0.283076530788832,0.809621403349789,0,0.395287777946524,0.642642632843614,0.141940085208269,0.35613120733451,0.162886959353576,0.164970122972535,1.32745138339963,0.242780636154981,0.302323556964751,0.188605079755898,0.295301892880773,0.307435147943927,0.258428293168221,0,0,0.316036757935816,0,0,1.02131881726136,1.26042765821917,1.16422815404479,0.643011105094777,1.06404140185364,0.713475270408282,0.329098041204242,0.304464949114599,0.704015124191131,1.27099242518292,0,0,0.322928853391811,0.241251699712623,0,0,0,0.18542530201051,0,0.82554747185289,0.370389054739423,0.188368457004691,0.683471138605126,0.457556346413045,1.18984900995699,0.419854356970974,1.10559979043539,0,0.632671987162271,0.203319467126849,0.108005340821801,0,0,0.404593039154462,0.165306911450672,0,0.129614973291793,0,2.25477175473676,0.598066184175915,0.66183396182839,0.388902376688095,0.645799117388655,0.506868376472335,0,0.2604087696879,0.209718688851422,0.483168241652012,0.576060012515731,3.16011120628178,1.01362607645082,1.33524244314275,1.94881234466693,1.07416017400489,1.19208812868759,2.16351809135944,1.47689527174577,1.51449674922221,2.209997392995,3.52891647978942,2.53390489923356,4.04089734889384,2.45441494581295,0,0.443971906748129,0.897138566094757,0.335769232728157,0.579568782096571,0.187682475451182,0.36630324853453,0.214368379079066,0,1.12950368523413,0,0,0.68741272937475,0,0,0,0.900642406448441,0,0,1.14166082342594,0.399024873401031,0.170733605754134,0,0.419226325255965,0.735374033800057,0.222246727801615,0,0.320919209591815,0.505394423527595,0,0.377252682772152,1.03005658216871,0.512201219238954,0.631790158511746,0.476293691283074,0.811190281613988,0.578727661391115,0,0.294397840268795,0.342869252385415,0.177475806159338,1.1921809497366,0.872078499793971,0.188218760830661,0.338458431566706,0,0,0.543216455383447,0.561142271657738,0.118635018124174,0.591026894253381,0.818462086339379,0.619747364743864,0.192906610981141,0.499621155875892,0.701794825336225,0.214871054048298,0.191288332068843,0,0.231867835620421|short_description=p3@Mob3a}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=208228 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q8BSU7 | |||
|association_with_transcript=-59bp_to_ENSMUST00000003438,NM_172457,uc007geh.1,uc007gei.1_5end | |||
|cluster_id=chr10:80164624..80164644,- | |||
|description=CAGE_peak_3_at_Mob3a_5end | |||
|id=chr10:80164624..80164644,- | |||
|ontology_enrichment_celltype=CL:0000117!8.63e-10!23;CL:0000337!8.63e-10!23;CL:0002319!1.45e-07!43;CL:0000221!3.47e-07!44;CL:0000133!3.47e-07!44;CL:0000540!3.65e-07!33;CL:0000047!3.65e-07!33;CL:0000031!3.65e-07!33;CL:0000404!3.65e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.68e-13,23;CL:0000337,4.68e-13,23;CL:0002609,6.92e-11,6;CL:0002319,5.49e-08,43;CL:0000540,7.35e-08,33;CL:0000047,7.35e-08,33;CL:0000031,7.35e-08,33;CL:0000404,7.35e-08,33;CL:0000221,1.07e-07,44;CL:0000133,1.07e-07,44;CL:0000393,4.97e-07,39;CL:0000211,4.97e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!4.19e-11!94;UBERON:0007811!2.59e-09!86;UBERON:0002370!1.54e-07!23;UBERON:0000974!1.54e-07!23;UBERON:0004807!1.54e-07!23;UBERON:0005058!1.54e-07!23;UBERON:0003351!1.54e-07!23;UBERON:0009113!1.54e-07!23;UBERON:0003295!1.54e-07!23;UBERON:0009722!1.54e-07!23;UBERON:0005562!1.54e-07!23;UBERON:0007690!1.54e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,3.75e-14,23;UBERON:0000974,3.75e-14,23;UBERON:0004807,3.75e-14,23;UBERON:0005058,3.75e-14,23;UBERON:0003351,3.75e-14,23;UBERON:0009113,3.75e-14,23;UBERON:0003295,3.75e-14,23;UBERON:0009722,3.75e-14,23;UBERON:0005562,3.75e-14,23;UBERON:0007690,3.75e-14,23;UBERON:0006562,2.24e-13,24;UBERON:0003408,2.24e-13,24;UBERON:0001557,2.24e-13,24;UBERON:0001042,2.24e-13,24;UBERON:0008814,2.24e-13,24;UBERON:0009145,2.24e-13,24;UBERON:0000072,2.12e-11,27;UBERON:0004177,2.58e-10,29;UBERON:0005057,2.58e-10,29;UBERON:0000153,1.78e-09,43;UBERON:0001049,4.22e-09,52;UBERON:0005068,4.22e-09,52;UBERON:0006241,4.22e-09,52;UBERON:0007135,4.22e-09,52;UBERON:0000077,5.43e-09,35;UBERON:0002616,6.92e-09,46;UBERON:0002780,8.51e-09,39;UBERON:0001890,8.51e-09,39;UBERON:0006240,8.51e-09,39;UBERON:0000955,1.38e-08,47;UBERON:0006238,1.38e-08,47;UBERON:0000073,1.50e-08,54;UBERON:0007811,1.51e-08,36;UBERON:0003080,1.85e-08,40;UBERON:0001017,7.24e-08,73;UBERON:0002020,1.65e-07,34;UBERON:0001016,1.75e-07,75;UBERON:0003528,4.30e-07,29;UBERON:0002791,4.30e-07,29;UBERON:0001893,4.30e-07,29;UBERON:0002346,4.37e-07,64;UBERON:0003075,4.37e-07,64;UBERON:0007284,4.37e-07,64;UBERON:0002390,6.34e-07,45;UBERON:0003061,6.34e-07,45;UBERON:0003056,6.98e-07,49 | |||
|phase1_expression=0.160148847104794,0,0,0.30246421130683,0,0.16787927191189,0,1.42035655785734,0.140788722151667,0.936258105287974,0.513653904676515,0.478632953972018,0.513602189793617,1.22388563386596,0.333109761815663,0.202475267389826,0,0.157731082679119,0.274228867211478,0.84877930359606,0.680346321208558,0.496454756004426,0.522399578277871,0,0.45881856213434,0.57423196411502,0,0,0,0,0,0.635030673459631,0.61506478758457,0,0,0.166234645358492,0,0.418531630736908,0,0.523523743973798,1.17646297606203,0.683045484958446,0.485510353031154,0.377690453926732,0.202753862439029,0.550640256485045,3.12956537739216,1.30815093828268,0.439372365468944,0,0.279972843250725,0,0.503347818173209,0,1.00828139742739,1.28629718017973,0.286533439938757,0,2.22548106945558,2.11596391708813,1.26766280701236,1.0165335962074,0,0.899899717281399,0.988866362566974,1.4209602298922,0.599200221036809,1.15265491596466,3.21437798156281,3.51015439662396,2.52389953621658,0.571301968807607,1.10434270475807,1.71487118900936,3.25874601462004,4.5960939330501,0,0.766124028511126,0.614426133024974,2.50583946687368,3.11057988248193,3.12548022334056,0.558365998002762,1.12552522006336,0.61119299110724,0.589257170947335,0.711858403995515,1.3047961207771,0.681535739998656,0.604572480854284,0.289864488701678,0,0,0,0,0,0.280888840263504,0.340860645156116,0.519572009205738,0,0.14084341977668,1.28326477414318,0,0,0.216491041011214,0.253359865475099,0,0.34255163915718,0.776813650941515,0,0.346970653532272,0.304465478312141,1.15307748628029,0.904335843315735,0,0,0.741584903203122,0,0,0.323533699894818,0.441683036920787,0,0,0,0.41889341362691,0.510914110417183,0.838705871541442,0,0.381210681219194,0.299581278809645,0,2.76439574648302,0.173824320192276,0,1.0389402227978,0.486723789203273,0.509196819251581,0.373220911830279,0.252722758433675,0.420883711772948,0.520481771850815,1.14951052216736,0.900310649026746,0.452114453507145,0.476255494059295,0.512454881139399,0.468508622798644,0,0.862271971731369,0.378212160335639,1.23165786914764,1.53437012699302,1.11218899690239,0.696504333044333,0.205782136407943,0.59710280045548,0,0,0.284163499395593,0.414251545071004,0.234526059981096,0.540186184383045,0.23674473558521,0,0.154267112887378,0.232533944750408,0.268273401399619,0.350296027101508,0.493679549740441,0,0.0810688095458557,0,0,0,0.420579897128254,2.36680608472354,0,0,0.639864751605702,0.232236671860439,0.257734922644187,0.201683524623343,0,0.190225626112559,0,0,0,0.198956472041151,0.58489226135736,0.898819408654221,0.216138049874694,0,0.189667900953082,0.114248512609729,1.1270773567308,0.610953983535943,0.193952487167626,0.0701358198903186,0.442655759869801,0.147610147979602,0.156998727841375,0.123397163921801,0,0.500535317148282,0.982794975566015,0,0.405720242777006,0.241177159752417,0.25462585178142,0.287696137450811,0,0,0,0.372140947668503,0,0,0,0,0.184753190166605,0.37898282354097,0.488894929326078,0.339490171550376,0.469380496577004,0.502518772325447,0.476087281772027,0.390267295715598,0.472905432318573,0.221464689648775,0.159454768657487,0,0.345369963731791,0,0,0.54390568381871,0,0,0.321101179975584,0.117211686592203,0.327869890753351,0,0,0.780877488593277,0.430846795465598,0.477937595905104,0.222798674082394,0.283076530788832,0.809621403349789,0,0.395287777946524,0.642642632843614,0.141940085208269,0.35613120733451,0.162886959353576,0.164970122972535,1.32745138339963,0.242780636154981,0.302323556964751,0.188605079755898,0.295301892880773,0.307435147943927,0.258428293168221,0,0,0.316036757935816,0,0,1.02131881726136,1.26042765821917,1.16422815404479,0.643011105094777,1.06404140185364,0.713475270408282,0.329098041204242,0.304464949114599,0.704015124191131,1.27099242518292,0,0,0.322928853391811,0.241251699712623,0,0,0,0.18542530201051,0,0.82554747185289,0.370389054739423,0.188368457004691,0.683471138605126,0.457556346413045,1.18984900995699,0.419854356970974,1.10559979043539,0,0.632671987162271,0.203319467126849,0.108005340821801,0,0,0.404593039154462,0.165306911450672,0,0.129614973291793,0,2.25477175473676,0.598066184175915,0.66183396182839,0.388902376688095,0.645799117388655,0.506868376472335,0,0.2604087696879,0.209718688851422,0.483168241652012,0.576060012515731,3.16011120628178,1.01362607645082,1.33524244314275,1.94881234466693,1.07416017400489,1.19208812868759,2.16351809135944,1.47689527174577,1.51449674922221,2.209997392995,3.52891647978942,2.53390489923356,4.04089734889384,2.45441494581295,0,0.443971906748129,0.897138566094757,0.335769232728157,0.579568782096571,0.187682475451182,0.36630324853453,0.214368379079066,0,1.12950368523413,0,0,0.68741272937475,0,0,0,0.900642406448441,0,0,1.14166082342594,0.399024873401031,0.170733605754134,0,0.419226325255965,0.735374033800057,0.222246727801615,0,0.320919209591815,0.505394423527595,0,0.377252682772152,1.03005658216871,0.512201219238954,0.631790158511746,0.476293691283074,0.811190281613988,0.578727661391115,0,0.294397840268795,0.342869252385415,0.177475806159338,1.1921809497366,0.872078499793971,0.188218760830661,0.338458431566706,0,0,0.543216455383447,0.561142271657738,0.118635018124174,0.591026894253381,0.818462086339379,0.619747364743864,0.192906610981141,0.499621155875892,0.701794825336225,0.214871054048298,0.191288332068843,0,0.231867835620421 | |||
|short_description=p3@Mob3a | |||
}} |
Latest revision as of 10:09, 26 September 2015
Short description: | p3@Mob3a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Mob3a_5end |
Coexpression cluster: | NA |
Association with transcript: | -59bp_to_ENSMUST00000003438, NM_172457, uc007geh.1, uc007gei.1_5end |
EntrezGene: | Mob3a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.68e-13 | 23 |
neuroblast (sensu Vertebrata) | 4.68e-13 | 23 |
neuron of cerebral cortex | 6.92e-11 | 6 |
neural cell | 5.49e-08 | 43 |
neuron | 7.35e-08 | 33 |
neuronal stem cell | 7.35e-08 | 33 |
neuroblast | 7.35e-08 | 33 |
electrically signaling cell | 7.35e-08 | 33 |
ectodermal cell | 1.07e-07 | 44 |
neurectodermal cell | 1.07e-07 | 44 |
electrically responsive cell | 4.97e-07 | 39 |
electrically active cell | 4.97e-07 | 39 |