FFCP PHASE1:Hg19::chr2:233246459..233246472,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=250 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=439 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_AF217992_5end | |||
|cluster_id=chr2:233246459..233246472,+ | |||
|coexpression_cluster_id=C106 | |||
|description=CAGE_peak_9_at_ALPP_5end | |||
|id=chr2:233246459..233246472,+ | |||
|ontology_enrichment_celltype=CL:0002541!2.50e-24!3;CL:0000039!1.67e-10!7;CL:0000586!1.67e-10!7;CL:0000319!3.25e-09!1 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.89e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;8.29e-61;29!UBERON:0006595;4.12e-09;86 | |||
|ontology_enrichment_disease=DOID:305!1.31e-10!106;DOID:3030!3.25e-09!1;DOID:178!3.53e-09!1;DOID:326!3.53e-09!1;DOID:3978!3.53e-09!1;DOID:3394!3.53e-09!1;DOID:5844!3.53e-09!1;DOID:0050687!1.50e-08!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.31e-16,106;DOID:0050687,2.95e-12,143;DOID:162,2.69e-07,235;DOID:14566,3.89e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0001737!4.76e-73!9;UBERON:0001557!5.77e-34!19;UBERON:0000476!2.50e-24!3;UBERON:0000920!2.50e-24!3;UBERON:0003124!1.90e-18!7;UBERON:0008947!2.53e-16!38;UBERON:0003258!2.53e-16!38;UBERON:0000072!3.00e-13!46;UBERON:0000065!2.56e-11!53;UBERON:0001004!8.24e-10!72;UBERON:0005631!2.53e-09!14;UBERON:0000158!2.53e-09!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.26e-195;9!UBERON:0001557;2.26e-195;9!UBERON:0000072;3.89e-44;37!UBERON:0000065;3.07e-37;44!UBERON:0001004;2.01e-19;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,2.26e-195,9;UBERON:0001557,1.04e-92,19;UBERON:0008947,1.96e-46,38;UBERON:0003258,1.96e-46,38;UBERON:0000072,1.49e-37,47;UBERON:0000065,1.09e-32,54;UBERON:0001004,7.65e-24,74;UBERON:0001041,2.89e-20,87;UBERON:0004921,8.97e-15,118;UBERON:0001007,5.33e-12,145;UBERON:0001555,5.33e-12,145;UBERON:0007026,5.33e-12,145;UBERON:0001048,6.31e-11,160;UBERON:0004119,7.41e-11,160;UBERON:0000925,7.41e-11,160;UBERON:0006595,7.41e-11,160;UBERON:0011216,1.33e-07,223 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.785817601275,4.55178663210875,1.68707720918437,4.52205288202815,2.61455332910887,2.37270619111097,2.69662616320329,3.53198637225623,5.77120735419586,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0.638002319463839,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438568099157414,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p9@ALPP | |||
}} |
Latest revision as of 21:07, 15 September 2015
Short description: | p9@ALPP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_ALPP_5end |
Coexpression cluster: | C106_Hep2_epitheloid_placenta_cervical_rectal_anaplastic_glassy |
Association with transcript: | 0bp_to_AF217992_5end |
EntrezGene: | ALPP |
HGNC: | 439 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.89e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 2.26e-195 | 9 |
upper respiratory tract | 1.04e-92 | 19 |
respiratory primordium | 1.96e-46 | 38 |
endoderm of foregut | 1.96e-46 | 38 |
segment of respiratory tract | 1.49e-37 | 47 |
respiratory tract | 1.09e-32 | 54 |
respiratory system | 7.65e-24 | 74 |
foregut | 2.89e-20 | 87 |
subdivision of digestive tract | 8.97e-15 | 118 |
digestive system | 5.33e-12 | 145 |
digestive tract | 5.33e-12 | 145 |
primitive gut | 5.33e-12 | 145 |
primordium | 6.31e-11 | 160 |
endoderm-derived structure | 7.41e-11 | 160 |
endoderm | 7.41e-11 | 160 |
presumptive endoderm | 7.41e-11 | 160 |
organ system subdivision | 1.33e-07 | 223 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.31e-16 | 106 |
cell type cancer | 2.95e-12 | 143 |
cancer | 2.69e-07 | 235 |
disease of cellular proliferation | 3.89e-07 | 239 |