FFCP PHASE1:Hg19::chr2:224856561..224856577,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:224856561..224856577,- | |||
|coexpression_cluster_id=C354 | |||
|description=CAGE_peak_at_chr2:224856561..224856577,- | |||
|id=chr2:224856561..224856577,- | |||
|ontology_enrichment_celltype=CL:0000055!3.96e-20!180;CL:0000057!6.07e-15!75;CL:0002620!5.81e-10!23 | |||
|ontology_enrichment_celltype_v019=CL:0002620;7.94e-12;23!CL:0000499;4.01e-07;28!CL:0000134;8.36e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.85e-17,76;CL:0002620,7.56e-12,23;CL:0000499,3.06e-07,28;CL:0000723,9.65e-07,433 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!6.51e-10!365;UBERON:0003102!6.27e-09!95;UBERON:0002199!1.49e-08!45;UBERON:0002416!1.49e-08!45;UBERON:0002097!1.66e-08!40;UBERON:0000468!3.78e-08!659;UBERON:0000486!9.07e-08!82 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;1.47e-10;41!UBERON:0002199;1.08e-08;46!UBERON:0002416;1.08e-08;46!UBERON:0004457;5.17e-08;9!UBERON:0000042;5.17e-08;9!UBERON:0003688;4.83e-07;6!UBERON:0002358;4.83e-07;6!UBERON:0003684;4.83e-07;6!UBERON:0001178;4.83e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.25e-13,41;UBERON:0002199,3.09e-13,46;UBERON:0002416,3.09e-13,46;UBERON:0003102,2.11e-10,99;UBERON:0004923,4.82e-09,66;UBERON:0003688,5.43e-07,6;UBERON:0002358,5.43e-07,6;UBERON:0003684,5.43e-07,6;UBERON:0001178,5.43e-07,6 | |||
|phase1_expression=4.54195948176392,9.20632252731228,3.66481450649525,8.00586386825043,2.23480547213644,40.9999106327173,0,1.89515962028049,0.261185628199839,0,0,0,0.527533956456907,1.60896258848061,5.96515276310248,1.34465029290355,0,2.19093027116212,0,0,0.612002073732759,0.940364164434263,0,0.547497700291537,0.125542639594803,0,0,0,0,0,0,0.919421224478927,1.50602959389125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.511450247374121,3.97583067623023,0.50133791063589,13.181033225435,4.7717156823066,35.5243455320924,0.189069634328136,0,0.175669571386252,0.523916301990851,0,0.370784442784429,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0,0,0.419499436209906,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,17.8909902610315,12.663051166458,3.97227542439656,50.77008187254,12.7680617591409,6.16745360156538,0,3.20667812942308,0.311211035399766,0.67355336034844,0.653847612453835,0,0.576175924479999,0.234321431833797,0.312160076830321,0.570471821544449,7.62188270814185,1.64408298101271,1.61872944368132,1.12360645361799,1.02077085627447,2.21101771161182,1.23990937410919,1.18800285728205,6.92347401979959,0,0.718618141816238,0,1.00094815897571,0,0.438977620880838,7.35570709917647,3.90618953157152,0.680593098960126,4.84352016359927,2.77624605464138,2.11931901159562,12.3037349394605,6.90451945897541,7.72921620136887,4.09457083929498,1.5189869901714,4.87185025805993,1.26216887122057,4.14224543890347,3.87950536365149,14.9104028856978,7.85866366175594,0.508681776931463,1.93260853163297,0.818238361772504,0.573609190778008,0.487894824518382,0,0.929551542956147,0.725627385107593,0.756962552626885,0.36497735907583,6.25798129319264,23.7999147131368,0,2.3218396401599,4.33127689001751,0.354920400119532,0.505754070234305,0.723033089650446,0.330881918197182,0.217879444092406,0.71181185733329,0.134831308160164,0,1.15424147083917,0.738155454624648,0,0,0,0,0,0,0,0,0.171567810298526,3.18275827685014,0,3.01586917234893,1.20364978706088,0,0,0,0.115930404975077,0.234817388471643,0.288732895522148,0.925971025153221,0.380508304469197,0,0,0,0,0,0,0.16798212819886,0.283550194484773,1.07470227243418,0.581267877027924,0.383382679165211,0,0,0,0,0,0.190493682876507,0.381988425558278,1.17217447210047,0,7.09509699652932,2.70308752059526,0.571652865261156,0.336393253036082,0,0.22001485746285,3.74887975697556,0,0,2.39344304926383,0,0,0,1.5985330740966,0.142977993658148,1.08524321078289,0,0,0,3.16780749173372,1.50719688529793,0.871533458600294,0.799783929456456,0,0,0,0,0,1.42636905040718,12.3064110667442,26.0954929638987,0.537182889719687,0.112085143993527,0,0,0,0.254094624222463,0,0.773288812777695,1.17261385734044,1.91381625495949,0,0,0,1.71768088406796,3.50119364741774,1.89885516589815,2.28767947683888,14.0958901149758,4.41566762095017,4.33423235473039,0.601892199455438,0,3.10419213877515,0,0.184369168541703,14.0751455438294,0,0,0,0,0,0,0,0.30239029332968,9.42809669711352,0.460385919864187,10.6650835884568,19.0927332390994,3.07024349440022,26.5408969886952,40.0728779401476,0.154209693802656,3.37367278094941,0.0821271560138091,3.11552657510173,0.581051892299796,0,22.4567246739679,0.644566922551274,2.18147451512753,6.3731908802351,4.72047893853927,0,0.693138033939733,0,1.46139224653261,0.527758144464379,1.13733384070897,0,0.215915916102139,0,0.812839312631559,0,0.254876273045038,0,0,0,0,0,0,0,0.9273691048295,1.00726411300178,0.330037999682352,0,1.30012049207304,14.4615536859744,0.193341436584244,0.770243085573222,0.460511024178389,0.275673144969061,0.107420244868274,0.580066775656914,0.596586391912706,0.267096106940212,2.14870389969272,2.11409074101617,0.255225424989168,0.6069466851333,1.85938219718914,21.4072395844835,1.3940745403212,1.23213432070436,1.06461206063404,0,0.18532421910392,1.5743737541619,0,0,0.190630193923825,0,0,0,2.35484592059769,0,4.66712950551293,1.7671860351853,0.202182481573316,0,1.26377536871694,0,28.7581917764916,2.11300293513511,0.272999822815972,4.66637925447252,5.65040583101214,0.551365343546124,10.6150236038595,7.89211593456773,0.578775534266688,0,0.405820753925408,3.40805847909725,1.69017361519345,0.143411352204052,0.0982490410131212,0,0,53.1991240950114,15.8061548620753,0,0,0.48111056362756,0.670302275535787,0,1.12972560932135,0.86101074534246,5.05414427002877,1.33029046061003,2.29723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423347165447766,0,0.280797178113459,0,0,0,0,0,0,0,0,0,0,0,0.976940477010201,0,0,0,0,0,0,0,0,0,0,2.14870036263921,0,0,1.9882952955326,1.54736358051564,0.222617410045812,0,0,0.597743964753209,0.276283915531148,0,0,0,3.11039587661807,0,0,0,1.28236427328014,0,0,4.84666373047609,1.02044907978036,0,0,0,0,0.1137934482855,0,0.236387681767936,0,0,0,0.885741385813839,1.32656082487949,0,2.10100593869327,1.18219047581419,1.75508317723178,0,0,0.230850775511391,0.227884111694002,0,0,0,15.3120556671321,6.04544116452291,70.3605904344598,0,0.156980256395025,0.332423363800313,0,0,0,0,0,2.95397290339238,0,0,0,1.99052386215701,0,0,0.296521128680622,0.123563938946503,0,0.134802265961354,0,1.40558667435203,0,0,0.242780379534093,0.394584402849391,2.41981432097328,0.61214552326098,0.758238955541855,0,0.103688191397247,0,0.992975867626496,0.313932918407225,0,0,0.138674673013139,0,0,0.261177619741208,0.52418000472609,0,0,0,0,0.387956065953678,0,1.12990370390266,0.137041924646751,0,0.379864775735272,0,0.160317640503067,0.213452994739353,1.19885765749278,0.144090417154106,0,0.171594997861965,0.288109595976299,0,0,0.407712618220842,0.209205692624666,0.407992870545287,0,0.600420288709789,1.09524303113594,0,0.859530882839914,0,1.95497680890578,0.229160424011684,1.43574604915363,0.199679000498991,0,0,0.0671834724867263,3.60299883542404,0,0.630265458457789,0.412079291905832,0.404421263125109,0.196854963029498,0,0.795229689809303,1.63444087333891,4.01882871162548,0.275078873194468,1.24632101408756,0,0,0.303747783290123,0,0.315222829196793,0.209818352539992,0,5.73719485865103,0,0.714695326373367,0.662091970365432,0,38.5529717245136,22.469758771233,70.5428697836324,1.19730191562487,0.082092520749339,1.36310417428337,0.113312091520126,0,0,0.387848869084652,1.19009341568421,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,3.90484047686282,0.876336514945499,0.573409195690071,1.22021956690538,0.310482014706917,0.138348634936231,0,5.45936823149932,1.7127920012698,0.470531639396343,0,0,2.68658645196373,0.467426619694449,1.10961172300523,6.43970217935303,6.0376296420618,4.44905610798268,8.6959225990831,1.51230923763239,10.5697296396291,6.20991629956462,1.75226443880073,0.899606224327209,0.931577741257556,34.8353214586319,2.39257543102195,3.1304703708704,1.95334891696384,2.28483127301277,2.03435366602331,1.09109195521536,2.57785336901972,1.85613503951397,2.3885753321917,0.800055529326307,5.15093557774189,5.38799182025471,0,0,0,0.521988583930423,0.906823702049089,0.926089897295336,0.97894681802587,0.537266523244462,0.617602894321944,0.438568099157414,2.65033718918822,0.38582807654183,0,0.76872455576384,0,0.911579868532147,0.553033744606923,0,0,0,1.63804924423206,1.2288645437686,0,0,0.106691729694141,0,1.13503190713367,0.184105950251841,0.419638523158333,0.622077260032973,0.127894371303652,0,0.471797825567689,0,0,0.212574920101683,0.619678821295011,0,0.318004350653419,0,0,0.705351887381368,2.4499638188256,0.128458450192919,0,0.478901577171454,0.41023272848151,1.00828678488687,0.138314504928436,1.45328081068666,0,0,0.11796972334774,0,0,0.381382095467167,0,0.198916222116275,0.0752103283492573,0.40341013740704,0.781514011233092,0,11.791578060727,0,0.337687923091973,0,0.413373593002368,0.253663240775627,0.546974809018219,0,0.496211178389294,0,0.127762427639595,0,0,0.606965604236632,0,3.45939243634291,0.345701962667338,2.22934412268644,0.135939465953663,0.328863867814245,0.118193840883968,0.333694205676207,0.078493092850514,1.25692471932802,0,1.82631744101899,0.647782773655864,0.9555033757741,0.357382720883282,0.158013611732727,0,0.173858272302579,0.801711364730253,1.86494547746733,0,0,0,0.946656005844523,0.340853619036631,0.423387050190929,0.4582137370881,2.48165108531456,1.91107787795487,0,0,0,0,0.102662806856247,2.3196288626764,0,0,0,0,0,0.109940516745429,0,0.0771741581079447,1.09279780251979,0,0.490296643507811,0,1.17785080268967,0.891139200981258,1.2679671827502,1.18948980281472,0,0.0644578879735772,0,0,0.352894871715692,0.0802413666891683,0,0.458729283404541,2.15009374727177,0,0.271965960763659,0.436350690340377,0,50.5913224706782,60.0828317220844,41.9647765260075,0,0,0.253397002022874,0,0,0.275684698604535,0,0.909344378618873,1.07185652062471,0.829169439458779,1.13776295448085,0,1.42838658878244,0.0645889098360061,0,0.560659312903067,0.190941474834495,0.202117188958219,0.653150243690884,0.684466602170562,0,0.573777643141411,1.33064142618405,0.162806537221949,0.533636729388577,0,2.24563005266467,2.34640942403454,0,0.406896178315738,0,0.805095174364105,0 | |||
|short_description=p@chr2:224856561..224856577,- | |||
}} |
Latest revision as of 07:11, 29 July 2015
Short description: | p@chr2:224856561..224856577, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:224856561..224856577, - |
Coexpression cluster: | C354_Fibroblast_Preadipocyte_Chondrocyte_chorionic_tenocyte_Synoviocyte_Smooth |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.85e-17 | 76 |
skin fibroblast | 7.56e-12 | 23 |
stromal cell | 3.06e-07 | 28 |
somatic stem cell | 9.65e-07 | 433 |
Ontology term | p-value | n |
---|---|---|
skin of body | 1.25e-13 | 41 |
integument | 3.09e-13 | 46 |
integumental system | 3.09e-13 | 46 |
surface structure | 2.11e-10 | 99 |
organ component layer | 4.82e-09 | 66 |
omentum | 5.43e-07 | 6 |
peritoneum | 5.43e-07 | 6 |
abdominal cavity | 5.43e-07 | 6 |
visceral peritoneum | 5.43e-07 | 6 |