FFCP PHASE1:Hg19::chr9:137764479..137764484,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr9:137764479..137764484,-
|short_description=p1@uc004cff.2
|description=CAGE_peak_1_at_uc004cff.2_5end
|association_with_transcript=-15bp_to_uc004cff.2_5end
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-15bp_to_uc004cff.2_5end | |||
|cluster_id=chr9:137764479..137764484,- | |||
|coexpression_cluster_id=C1441 | |||
|description=CAGE_peak_1_at_uc004cff.2_5end | |||
|id=chr9:137764479..137764484,- | |||
|ontology_enrichment_celltype=CL:0000945!4.12e-22!24;CL:0000826!4.12e-22!24;CL:0000838!5.76e-09!52;CL:0000542!1.04e-08!53;CL:0000051!1.04e-08!53;CL:0002622!1.76e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.11e-16;24!CL:0002622;6.83e-14;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,9.32e-17,24;CL:0000826,9.32e-17,24;CL:0002622,9.55e-14,3;CL:0000785,6.08e-10,2;CL:0000955,6.08e-10,2;CL:0000818,6.08e-10,2;CL:0000954,6.08e-10,2;CL:0000816,6.08e-10,2;CL:0000838,2.64e-08,52;CL:0000542,4.14e-08,53;CL:0000051,4.14e-08,53;CL:0000817,6.75e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000954;8.52e-10;2 | |||
|ontology_enrichment_disease=DOID:14566!2.75e-14!239;DOID:162!2.31e-13!235;DOID:0060058!6.40e-10!10;DOID:0050686!5.63e-08!137 | |||
|ontology_enrichment_disease_v019=DOID:1909;1.93e-10;2!DOID:0060058;8.56e-08;10 | |||
|ontology_enrichment_disease_v019_2=DOID:162,1.19e-10,235;DOID:1909,1.84e-10,2;DOID:14566,2.73e-10,239;DOID:0060058,8.27e-08,10;DOID:0050687,3.55e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0001046!1.73e-07!19 | |||
|ontology_enrichment_uberon_v019=UBERON:0004907;7.67e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004907,8.32e-09,5;UBERON:0001046,6.44e-08,19 | |||
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| ||
|short_description=p1@uc004cff.2 | |||
}} | }} |
Latest revision as of 00:08, 1 August 2015
Short description: | p1@uc004cff.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc004cff.2_5end |
Coexpression cluster: | C1441_fibrosarcoma_hereditary_lymphangiectasia_adult_bronchioalveolar_myeloma_colon |
Association with transcript: | -15bp_to_uc004cff.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 9.32e-17 | 24 |
pro-B cell | 9.32e-17 | 24 |
prostate stromal cell | 9.55e-14 | 3 |
mature B cell | 6.08e-10 | 2 |
pre-B-II cell | 6.08e-10 | 2 |
transitional stage B cell | 6.08e-10 | 2 |
small pre-B-II cell | 6.08e-10 | 2 |
immature B cell | 6.08e-10 | 2 |
lymphoid lineage restricted progenitor cell | 2.64e-08 | 52 |
lymphocyte | 4.14e-08 | 53 |
common lymphoid progenitor | 4.14e-08 | 53 |
precursor B cell | 6.75e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
lower digestive tract | 8.32e-09 | 5 |
hindgut | 6.44e-08 | 19 |
Ontology term | p-value | n |
---|---|---|
cancer | 1.19e-10 | 235 |
melanoma | 1.84e-10 | 2 |
disease of cellular proliferation | 2.73e-10 | 239 |
lymphoma | 8.27e-08 | 10 |
cell type cancer | 3.55e-07 | 143 |