FFCP PHASE1:Mm9::chr10:42660218..42660250,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1512|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:42660218..42660250,+|id=chr10:42660218..42660250,+|ontology_enrichment_celltype=CL:0002563!7.30e-09!9;CL:0002251!7.30e-09!9|ontology_enrichment_celltype_v019_2=CL:0002563,1.26e-11,9;CL:0002251,1.26e-11,9;CL:0000239,8.83e-08,6;CL:0000677,8.83e-08,6;CL:0000584,8.83e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005409!2.99e-36!59;UBERON:0000160!3.30e-34!43;UBERON:0000344!2.87e-13!15;UBERON:0002108!8.58e-13!16;UBERON:0001242!1.05e-11!13;UBERON:0000060!1.05e-11!13;UBERON:0001262!1.05e-11!13;UBERON:0004786!1.05e-11!13;UBERON:0001007!1.82e-10!128;UBERON:0001555!1.82e-10!128;UBERON:0007026!1.82e-10!128;UBERON:0004119!2.02e-10!130;UBERON:0000925!2.02e-10!130;UBERON:0006595!2.02e-10!130;UBERON:0001045!2.42e-10!13;UBERON:0001264!9.51e-10!12;UBERON:0003922!9.51e-10!12;UBERON:0002114!9.51e-10!12;UBERON:0003923!9.51e-10!12;UBERON:0003924!9.51e-10!12;UBERON:0003921!9.51e-10!12;UBERON:0004921!1.79e-09!126;UBERON:0004185!1.79e-09!126;UBERON:0003350!7.30e-09!9;UBERON:0004808!7.30e-09!9;UBERON:0001277!7.30e-09!9;UBERON:0004923!2.76e-08!24;UBERON:0002075!8.71e-07!19|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.59e-33,47;UBERON:0000160,3.20e-32,31;UBERON:0000344,1.07e-17,15;UBERON:0001242,1.52e-15,13;UBERON:0001262,1.52e-15,13;UBERON:0004786,1.52e-15,13;UBERON:0001264,7.61e-13,12;UBERON:0003350,1.26e-11,9;UBERON:0004808,1.26e-11,9;UBERON:0001277,1.26e-11,9;UBERON:0004923,2.92e-10,24;UBERON:0000485,5.05e-09,11;UBERON:0001007,5.47e-08,116;UBERON:0001555,5.47e-08,116;UBERON:0007026,5.47e-08,116;UBERON:0002075,7.37e-08,19;UBERON:0004119,1.18e-07,118;UBERON:0000925,1.18e-07,118;UBERON:0006595,1.18e-07,118;UBERON:0004921,5.80e-07,114|phase1_expression=0,15.0059425284925,17.2899710968024,22.9872800593191,17.0304548181758,31.5613031194353,26.3982283872944,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,23.8388709962176,19.4997888907094,14.3557991028755,15.9381938578858,21.331652035903,15.771943814879,24.4469225867133,16.4080577884925,0,0,0,57.1926207107524,54.358729032227,57.3715891097257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68533304158102,0,0,0,0,0,0,0,0,0,0,4.68153906848146,0,0.29688427812965,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0.161766849947409,0,0,13.0474232852686,0,0,19.4147361958529,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.248813941220186,2.27450482590307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414251545071004,0,0.36012412292203,0,0,0,0,0.268273401399619,0,0.16455984991348,0,0.162137619091711,0.438599962275997,0,0.268412837520744,0,0,16.1905203662061,20.0982430664294,0.213288250535234,1.39342003116263,12.2424088255989,20.9750865608276,23.7944506914011,26.0609107774206,27.5226855695817,21.5755630688454,19.3528110776208,25.8643413653496,20.2762650603885,20.6728463990471,20.1008386383466,25.2909417033046,0.569003702859245,0.228497025219458,0,0,0,0.140271639780637,0.316182685621286,0,0,0.123397163921801,0,0.166845105716094,0,0.224862112384854,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47529281905711,0.827810238914197,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,0.164970122972535,37.1686387351896,1.94224508923985,8.16273603804828,14.1453809816924,15.0603965369194,15.6791925451403,14.2135561242522,9.45187696641514,15.6858846489277,32.551786067389,46.3841877729995,38.1601510018291,0.340439605753788,0,0,0,0,0,0,0,0,0.21183207086382,1.32317038832977,0,0,0,0,0,25.9417944600567,0,0,1.03193433981611,0.185194527369712,0,0,0,0,0,0,2.86401185404534,0.316335993581135,3.04979200690273,7.23635783506068,8.36353184057875,10.0446779323242,4.45052343069908,5.95104881222419,6.28214260761671,12.7022673825957,0,0,0.149516546043979,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0,13.1869169472431,0.428736758158132,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0.972426868273176,0.419226325255965,2.5738091183002,1.11123363900808,2.06035057238894,2.56735367673452,1.01078884705519,1.01391719956096,1.88626341386076,0.936415074698824,1.02440243847791,1.20614484806788,1.42888107384922,1.15884325944855,0.964546102318525,0.824171801606613,1.61918812147837,2.05721551431249,0.887379030796687,0.238436189947321,1.74415699958794,1.03520318456864,1.77690676572521,0.914639864363863,0.789209134313529,1.90125759384206,1.12228454331548,1.42362021749009,1.18205378850676,2.04615521584845,0.929621047115796,0.578719832943424,0,0.701794825336225,1.71896843238639,0.191288332068843,0,0|short_description=p@chr10:42660218..42660250,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1512 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:42660218..42660250,+ | |||
|description=CAGE_peak_at_chr10:42660218..42660250,+ | |||
|id=chr10:42660218..42660250,+ | |||
|ontology_enrichment_celltype=CL:0002563!7.30e-09!9;CL:0002251!7.30e-09!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.26e-11,9;CL:0002251,1.26e-11,9;CL:0000239,8.83e-08,6;CL:0000677,8.83e-08,6;CL:0000584,8.83e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!2.99e-36!59;UBERON:0000160!3.30e-34!43;UBERON:0000344!2.87e-13!15;UBERON:0002108!8.58e-13!16;UBERON:0001242!1.05e-11!13;UBERON:0000060!1.05e-11!13;UBERON:0001262!1.05e-11!13;UBERON:0004786!1.05e-11!13;UBERON:0001007!1.82e-10!128;UBERON:0001555!1.82e-10!128;UBERON:0007026!1.82e-10!128;UBERON:0004119!2.02e-10!130;UBERON:0000925!2.02e-10!130;UBERON:0006595!2.02e-10!130;UBERON:0001045!2.42e-10!13;UBERON:0001264!9.51e-10!12;UBERON:0003922!9.51e-10!12;UBERON:0002114!9.51e-10!12;UBERON:0003923!9.51e-10!12;UBERON:0003924!9.51e-10!12;UBERON:0003921!9.51e-10!12;UBERON:0004921!1.79e-09!126;UBERON:0004185!1.79e-09!126;UBERON:0003350!7.30e-09!9;UBERON:0004808!7.30e-09!9;UBERON:0001277!7.30e-09!9;UBERON:0004923!2.76e-08!24;UBERON:0002075!8.71e-07!19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,2.59e-33,47;UBERON:0000160,3.20e-32,31;UBERON:0000344,1.07e-17,15;UBERON:0001242,1.52e-15,13;UBERON:0001262,1.52e-15,13;UBERON:0004786,1.52e-15,13;UBERON:0001264,7.61e-13,12;UBERON:0003350,1.26e-11,9;UBERON:0004808,1.26e-11,9;UBERON:0001277,1.26e-11,9;UBERON:0004923,2.92e-10,24;UBERON:0000485,5.05e-09,11;UBERON:0001007,5.47e-08,116;UBERON:0001555,5.47e-08,116;UBERON:0007026,5.47e-08,116;UBERON:0002075,7.37e-08,19;UBERON:0004119,1.18e-07,118;UBERON:0000925,1.18e-07,118;UBERON:0006595,1.18e-07,118;UBERON:0004921,5.80e-07,114 | |||
|phase1_expression=0,15.0059425284925,17.2899710968024,22.9872800593191,17.0304548181758,31.5613031194353,26.3982283872944,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,23.8388709962176,19.4997888907094,14.3557991028755,15.9381938578858,21.331652035903,15.771943814879,24.4469225867133,16.4080577884925,0,0,0,57.1926207107524,54.358729032227,57.3715891097257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68533304158102,0,0,0,0,0,0,0,0,0,0,4.68153906848146,0,0.29688427812965,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0.161766849947409,0,0,13.0474232852686,0,0,19.4147361958529,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.248813941220186,2.27450482590307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414251545071004,0,0.36012412292203,0,0,0,0,0.268273401399619,0,0.16455984991348,0,0.162137619091711,0.438599962275997,0,0.268412837520744,0,0,16.1905203662061,20.0982430664294,0.213288250535234,1.39342003116263,12.2424088255989,20.9750865608276,23.7944506914011,26.0609107774206,27.5226855695817,21.5755630688454,19.3528110776208,25.8643413653496,20.2762650603885,20.6728463990471,20.1008386383466,25.2909417033046,0.569003702859245,0.228497025219458,0,0,0,0.140271639780637,0.316182685621286,0,0,0.123397163921801,0,0.166845105716094,0,0.224862112384854,0,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47529281905711,0.827810238914197,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.425820255624806,0,0,0.164970122972535,37.1686387351896,1.94224508923985,8.16273603804828,14.1453809816924,15.0603965369194,15.6791925451403,14.2135561242522,9.45187696641514,15.6858846489277,32.551786067389,46.3841877729995,38.1601510018291,0.340439605753788,0,0,0,0,0,0,0,0,0.21183207086382,1.32317038832977,0,0,0,0,0,25.9417944600567,0,0,1.03193433981611,0.185194527369712,0,0,0,0,0,0,2.86401185404534,0.316335993581135,3.04979200690273,7.23635783506068,8.36353184057875,10.0446779323242,4.45052343069908,5.95104881222419,6.28214260761671,12.7022673825957,0,0,0.149516546043979,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0,13.1869169472431,0.428736758158132,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0,0,0,0.972426868273176,0.419226325255965,2.5738091183002,1.11123363900808,2.06035057238894,2.56735367673452,1.01078884705519,1.01391719956096,1.88626341386076,0.936415074698824,1.02440243847791,1.20614484806788,1.42888107384922,1.15884325944855,0.964546102318525,0.824171801606613,1.61918812147837,2.05721551431249,0.887379030796687,0.238436189947321,1.74415699958794,1.03520318456864,1.77690676572521,0.914639864363863,0.789209134313529,1.90125759384206,1.12228454331548,1.42362021749009,1.18205378850676,2.04615521584845,0.929621047115796,0.578719832943424,0,0.701794825336225,1.71896843238639,0.191288332068843,0,0 | |||
|short_description=p@chr10:42660218..42660250,+ | |||
}} |
Latest revision as of 09:40, 4 August 2015
Short description: | p@chr10:42660218..42660250, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:42660218..42660250, + |
Coexpression cluster: | MCL_coexpression_mm9:1512 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.26e-11 | 9 |
epithelial cell of alimentary canal | 1.26e-11 | 9 |
brush border epithelial cell | 8.83e-08 | 6 |
gut absorptive cell | 8.83e-08 | 6 |
enterocyte | 8.83e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 2.59e-33 | 47 |
intestine | 3.20e-32 | 31 |
mucosa | 1.07e-17 | 15 |
intestinal mucosa | 1.52e-15 | 13 |
wall of intestine | 1.52e-15 | 13 |
gastrointestinal system mucosa | 1.52e-15 | 13 |
pancreas | 7.61e-13 | 12 |
epithelium of mucosa | 1.26e-11 | 9 |
gastrointestinal system epithelium | 1.26e-11 | 9 |
intestinal epithelium | 1.26e-11 | 9 |
organ component layer | 2.92e-10 | 24 |
simple columnar epithelium | 5.05e-09 | 11 |
digestive system | 5.47e-08 | 116 |
digestive tract | 5.47e-08 | 116 |
primitive gut | 5.47e-08 | 116 |
viscus | 7.37e-08 | 19 |
endoderm-derived structure | 1.18e-07 | 118 |
endoderm | 1.18e-07 | 118 |
presumptive endoderm | 1.18e-07 | 118 |
subdivision of digestive tract | 5.80e-07 | 114 |