FFCP PHASE1:Mm9::chr10:42303452..42303470,-: Difference between revisions
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{{FFCP|EntrezGene=21907|HGNC=|MCL_coexpression_id=763|UniProt=Q64104|association_with_transcript=-14bp_to_ENSMUST00000019938_5end|description=CAGE_peak_2_at_Nr2e1_5end|id=chr10:42303452..42303470,-|ontology_enrichment_celltype=CL:0000221!7.22e-09!44;CL:0000133!7.22e-09!44;CL:0002609!1.28e-08!6;CL:0000117!1.35e-08!23;CL:0000337!1.35e-08!23;CL:0002319!3.75e-08!43|ontology_enrichment_celltype_v019_2=CL:0002609,6.37e-14,6;CL:0000221,6.08e-13,44;CL:0000133,6.08e-13,44;CL:0002319,9.45e-12,43;CL:0000117,3.27e-09,23;CL:0000337,3.27e-09,23;CL:0002453,5.21e-09,8;CL:0002608,8.47e-08,3;CL:0000333,4.74e-07,10;CL:0000095,4.74e-07,10;CL:0000243,4.74e-07,10;CL:0000123,4.74e-07,10;CL:0000125,4.74e-07,10;CL:0000030,4.74e-07,10;CL:0000339,4.74e-07,10;CL:0002613,5.13e-07,3;CL:0000540,9.20e-07,33;CL:0000047,9.20e-07,33;CL:0000031,9.20e-07,33;CL:0000404,9.20e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003056!3.18e-37!49;UBERON:0000033!8.21e-36!63;UBERON:0002791!2.61e-27!29;UBERON:0003528!2.61e-27!29;UBERON:0001893!2.61e-27!29;UBERON:0003080!1.03e-26!40;UBERON:0002780!6.73e-26!39;UBERON:0001890!6.73e-26!39;UBERON:0006240!6.73e-26!39;UBERON:0000955!3.01e-25!50;UBERON:0006238!3.01e-25!50;UBERON:0002616!2.27e-24!49;UBERON:0002346!1.55e-22!71;UBERON:0003075!1.55e-22!71;UBERON:0007284!1.55e-22!71;UBERON:0002020!8.46e-22!34;UBERON:0007811!8.71e-22!86;UBERON:0004121!3.26e-20!102;UBERON:0000924!3.26e-20!102;UBERON:0006601!3.26e-20!102;UBERON:0000956!5.94e-20!21;UBERON:0001869!5.94e-20!21;UBERON:0000203!5.94e-20!21;UBERON:0001049!2.16e-19!52;UBERON:0005068!2.16e-19!52;UBERON:0006241!2.16e-19!52;UBERON:0007135!2.16e-19!52;UBERON:0001017!5.04e-19!73;UBERON:0005743!5.04e-19!73;UBERON:0000153!1.46e-18!94;UBERON:0000073!3.85e-18!75;UBERON:0001016!3.85e-18!75;UBERON:0002619!1.64e-15!17;UBERON:0000020!1.11e-11!12;UBERON:0001032!1.11e-11!12;UBERON:0004456!1.11e-11!12;UBERON:0000970!3.29e-11!9;UBERON:0000019!3.29e-11!9;UBERON:0000047!3.29e-11!9;UBERON:0004088!3.29e-11!9;UBERON:0002104!3.29e-11!9;UBERON:0001456!3.29e-11!9;UBERON:0003072!3.29e-11!9;UBERON:0003071!3.29e-11!9;UBERON:0004128!3.29e-11!9;UBERON:0005085!1.65e-10!13;UBERON:0001954!4.33e-09!7;UBERON:0003022!4.33e-09!7;UBERON:0002421!4.33e-09!7;UBERON:0000349!4.33e-09!7;UBERON:0002600!4.33e-09!7;UBERON:0001444!1.13e-08!11;UBERON:0002420!2.22e-08!8;UBERON:0007245!2.22e-08!8;UBERON:0010009!2.22e-08!8;UBERON:0010011!2.22e-08!8;UBERON:0000454!2.22e-08!8;UBERON:0002021!4.57e-08!10;UBERON:0000411!4.57e-08!10;UBERON:0001950!4.57e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0003056,9.53e-43,49;UBERON:0003528,1.33e-35,29;UBERON:0002791,1.33e-35,29;UBERON:0001893,1.33e-35,29;UBERON:0002346,4.30e-33,64;UBERON:0003075,4.30e-33,64;UBERON:0007284,4.30e-33,64;UBERON:0010371,7.34e-32,73;UBERON:0004121,1.30e-30,95;UBERON:0000924,1.30e-30,95;UBERON:0006601,1.30e-30,95;UBERON:0002780,1.37e-29,39;UBERON:0001890,1.37e-29,39;UBERON:0006240,1.37e-29,39;UBERON:0002020,1.87e-29,34;UBERON:0003080,1.10e-28,40;UBERON:0000956,3.29e-28,21;UBERON:0001869,3.29e-28,21;UBERON:0000203,3.29e-28,21;UBERON:0000955,9.53e-28,47;UBERON:0006238,9.53e-28,47;UBERON:0002616,2.15e-26,46;UBERON:0010314,1.66e-23,92;UBERON:0000073,3.20e-23,54;UBERON:0001017,7.37e-23,73;UBERON:0001049,1.46e-22,52;UBERON:0005068,1.46e-22,52;UBERON:0006241,1.46e-22,52;UBERON:0007135,1.46e-22,52;UBERON:0001016,4.87e-22,75;UBERON:0002619,1.12e-20,17;UBERON:0000020,8.37e-17,12;UBERON:0001032,8.37e-17,12;UBERON:0004456,8.37e-17,12;UBERON:0000033,2.46e-15,13;UBERON:0005085,2.46e-15,13;UBERON:0000970,2.87e-15,9;UBERON:0000019,2.87e-15,9;UBERON:0000047,2.87e-15,9;UBERON:0010312,2.87e-15,9;UBERON:0004088,2.87e-15,9;UBERON:0002104,2.87e-15,9;UBERON:0001456,2.87e-15,9;UBERON:0003072,2.87e-15,9;UBERON:0004128,2.87e-15,9;UBERON:0003071,2.87e-15,9;UBERON:0001954,9.58e-15,7;UBERON:0003022,9.58e-15,7;UBERON:0002421,9.58e-15,7;UBERON:0000349,9.58e-15,7;UBERON:0002600,9.58e-15,7;UBERON:0001444,3.39e-12,11;UBERON:0000369,3.34e-10,5;UBERON:0002435,3.34e-10,5;UBERON:0000204,3.34e-10,5;UBERON:0010082,3.34e-10,5;UBERON:0002021,1.74e-08,10;UBERON:0000411,1.74e-08,10;UBERON:0001950,1.74e-08,10;UBERON:0002420,1.83e-08,8;UBERON:0007245,1.83e-08,8;UBERON:0010009,1.83e-08,8;UBERON:0010011,1.83e-08,8;UBERON:0000454,1.83e-08,8;UBERON:0000483,2.29e-08,174;UBERON:0000119,3.56e-08,176;UBERON:0004111,2.57e-07,122;UBERON:0000025,9.38e-07,114|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.01457859675027,3.51497892375155,3.88859798148567,1.67983705950435,0,0,0,0,0,0,0,0.809265843438391,0,0,0,0,0,0,0,2.39680088414724,2.68952813725088,6.947204024668,8.37036817656482,7.78202357000113,0,0,8.45186514583183,9.4887016308054,5.51531271966013,0,0.893811366596314,1.22885226604995,3.16527090552465,2.47016637726506,3.64639359389732,0.279182999001381,1.12552522006336,0.916789486660861,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,3.52108549441701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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=21907 | |||
|HGNC= | |||
|MCL_coexpression_id=763 | |||
|TSSclassifier=NA | |||
|UniProt=Q64104 | |||
|association_with_transcript=-14bp_to_ENSMUST00000019938_5end | |||
|cluster_id=chr10:42303452..42303470,- | |||
|description=CAGE_peak_2_at_Nr2e1_5end | |||
|id=chr10:42303452..42303470,- | |||
|ontology_enrichment_celltype=CL:0000221!7.22e-09!44;CL:0000133!7.22e-09!44;CL:0002609!1.28e-08!6;CL:0000117!1.35e-08!23;CL:0000337!1.35e-08!23;CL:0002319!3.75e-08!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0002609,6.37e-14,6;CL:0000221,6.08e-13,44;CL:0000133,6.08e-13,44;CL:0002319,9.45e-12,43;CL:0000117,3.27e-09,23;CL:0000337,3.27e-09,23;CL:0002453,5.21e-09,8;CL:0002608,8.47e-08,3;CL:0000333,4.74e-07,10;CL:0000095,4.74e-07,10;CL:0000243,4.74e-07,10;CL:0000123,4.74e-07,10;CL:0000125,4.74e-07,10;CL:0000030,4.74e-07,10;CL:0000339,4.74e-07,10;CL:0002613,5.13e-07,3;CL:0000540,9.20e-07,33;CL:0000047,9.20e-07,33;CL:0000031,9.20e-07,33;CL:0000404,9.20e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!3.18e-37!49;UBERON:0000033!8.21e-36!63;UBERON:0002791!2.61e-27!29;UBERON:0003528!2.61e-27!29;UBERON:0001893!2.61e-27!29;UBERON:0003080!1.03e-26!40;UBERON:0002780!6.73e-26!39;UBERON:0001890!6.73e-26!39;UBERON:0006240!6.73e-26!39;UBERON:0000955!3.01e-25!50;UBERON:0006238!3.01e-25!50;UBERON:0002616!2.27e-24!49;UBERON:0002346!1.55e-22!71;UBERON:0003075!1.55e-22!71;UBERON:0007284!1.55e-22!71;UBERON:0002020!8.46e-22!34;UBERON:0007811!8.71e-22!86;UBERON:0004121!3.26e-20!102;UBERON:0000924!3.26e-20!102;UBERON:0006601!3.26e-20!102;UBERON:0000956!5.94e-20!21;UBERON:0001869!5.94e-20!21;UBERON:0000203!5.94e-20!21;UBERON:0001049!2.16e-19!52;UBERON:0005068!2.16e-19!52;UBERON:0006241!2.16e-19!52;UBERON:0007135!2.16e-19!52;UBERON:0001017!5.04e-19!73;UBERON:0005743!5.04e-19!73;UBERON:0000153!1.46e-18!94;UBERON:0000073!3.85e-18!75;UBERON:0001016!3.85e-18!75;UBERON:0002619!1.64e-15!17;UBERON:0000020!1.11e-11!12;UBERON:0001032!1.11e-11!12;UBERON:0004456!1.11e-11!12;UBERON:0000970!3.29e-11!9;UBERON:0000019!3.29e-11!9;UBERON:0000047!3.29e-11!9;UBERON:0004088!3.29e-11!9;UBERON:0002104!3.29e-11!9;UBERON:0001456!3.29e-11!9;UBERON:0003072!3.29e-11!9;UBERON:0003071!3.29e-11!9;UBERON:0004128!3.29e-11!9;UBERON:0005085!1.65e-10!13;UBERON:0001954!4.33e-09!7;UBERON:0003022!4.33e-09!7;UBERON:0002421!4.33e-09!7;UBERON:0000349!4.33e-09!7;UBERON:0002600!4.33e-09!7;UBERON:0001444!1.13e-08!11;UBERON:0002420!2.22e-08!8;UBERON:0007245!2.22e-08!8;UBERON:0010009!2.22e-08!8;UBERON:0010011!2.22e-08!8;UBERON:0000454!2.22e-08!8;UBERON:0002021!4.57e-08!10;UBERON:0000411!4.57e-08!10;UBERON:0001950!4.57e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,9.53e-43,49;UBERON:0003528,1.33e-35,29;UBERON:0002791,1.33e-35,29;UBERON:0001893,1.33e-35,29;UBERON:0002346,4.30e-33,64;UBERON:0003075,4.30e-33,64;UBERON:0007284,4.30e-33,64;UBERON:0010371,7.34e-32,73;UBERON:0004121,1.30e-30,95;UBERON:0000924,1.30e-30,95;UBERON:0006601,1.30e-30,95;UBERON:0002780,1.37e-29,39;UBERON:0001890,1.37e-29,39;UBERON:0006240,1.37e-29,39;UBERON:0002020,1.87e-29,34;UBERON:0003080,1.10e-28,40;UBERON:0000956,3.29e-28,21;UBERON:0001869,3.29e-28,21;UBERON:0000203,3.29e-28,21;UBERON:0000955,9.53e-28,47;UBERON:0006238,9.53e-28,47;UBERON:0002616,2.15e-26,46;UBERON:0010314,1.66e-23,92;UBERON:0000073,3.20e-23,54;UBERON:0001017,7.37e-23,73;UBERON:0001049,1.46e-22,52;UBERON:0005068,1.46e-22,52;UBERON:0006241,1.46e-22,52;UBERON:0007135,1.46e-22,52;UBERON:0001016,4.87e-22,75;UBERON:0002619,1.12e-20,17;UBERON:0000020,8.37e-17,12;UBERON:0001032,8.37e-17,12;UBERON:0004456,8.37e-17,12;UBERON:0000033,2.46e-15,13;UBERON:0005085,2.46e-15,13;UBERON:0000970,2.87e-15,9;UBERON:0000019,2.87e-15,9;UBERON:0000047,2.87e-15,9;UBERON:0010312,2.87e-15,9;UBERON:0004088,2.87e-15,9;UBERON:0002104,2.87e-15,9;UBERON:0001456,2.87e-15,9;UBERON:0003072,2.87e-15,9;UBERON:0004128,2.87e-15,9;UBERON:0003071,2.87e-15,9;UBERON:0001954,9.58e-15,7;UBERON:0003022,9.58e-15,7;UBERON:0002421,9.58e-15,7;UBERON:0000349,9.58e-15,7;UBERON:0002600,9.58e-15,7;UBERON:0001444,3.39e-12,11;UBERON:0000369,3.34e-10,5;UBERON:0002435,3.34e-10,5;UBERON:0000204,3.34e-10,5;UBERON:0010082,3.34e-10,5;UBERON:0002021,1.74e-08,10;UBERON:0000411,1.74e-08,10;UBERON:0001950,1.74e-08,10;UBERON:0002420,1.83e-08,8;UBERON:0007245,1.83e-08,8;UBERON:0010009,1.83e-08,8;UBERON:0010011,1.83e-08,8;UBERON:0000454,1.83e-08,8;UBERON:0000483,2.29e-08,174;UBERON:0000119,3.56e-08,176;UBERON:0004111,2.57e-07,122;UBERON:0000025,9.38e-07,114 | |||
|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.01457859675027,3.51497892375155,3.88859798148567,1.67983705950435,0,0,0,0,0,0,0,0.809265843438391,0,0,0,0,0,0,0,2.39680088414724,2.68952813725088,6.947204024668,8.37036817656482,7.78202357000113,0,0,8.45186514583183,9.4887016308054,5.51531271966013,0,0.893811366596314,1.22885226604995,3.16527090552465,2.47016637726506,3.64639359389732,0.279182999001381,1.12552522006336,0.916789486660861,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,3.52108549441701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.898743836428936,2.28750301409313,1.50785222535437,1.39059456153821,0.767146371990992,1.45451631191692,0.973447578406546,0,0,0,0.631325567659422,6.11566081924707,7.35686734187113,9.54329287968351,7.53524089178575,10.0694018743965,9.22418786050918,7.77724313845749,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89260953707715,2.26390147234426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98067203434441,0.517434735131018,0.428674070063185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3885110557024,2.30162618253588,1.14579102687879,1.71853182343688,1.37016503954128,0,0.675022500231806,1.35096360967266,0.906284817968409,2.07104124700728,1.97195960409936,1.99512436700516,1.53660245178721,0.486213434136588,0.838452650511929,0,0.44449345560323,0.412070114477788,0.320919209591815,0.252697211763798,0.50695859978048,0,0.0936415074698824,0.320125762024346,0.17230640686684,0.476293691283074,0.463537303779422,0.192909220463705,0,0.294397840268795,0.342869252385415,0.177475806159338,0.238436189947321,0.436039249896986,0.470546902076653,0.338458431566706,0.365855945745545,0,0.271608227691724,0.561142271657738,0.118635018124174,0.394017929502254,0.409231043169689,0.309873682371932,0.192906610981141,0.499621155875892,0.467863216890817,0,0,0,0 | |||
|short_description=p2@Nr2e1 | |||
}} |
Latest revision as of 00:38, 26 September 2015
Short description: | p2@Nr2e1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Nr2e1_5end |
Coexpression cluster: | MCL_coexpression_mm9:763 |
Association with transcript: | -14bp_to_ENSMUST00000019938_5end |
EntrezGene: | Nr2e1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron of cerebral cortex | 6.37e-14 | 6 |
ectodermal cell | 6.08e-13 | 44 |
neurectodermal cell | 6.08e-13 | 44 |
neural cell | 9.45e-12 | 43 |
CNS neuron (sensu Vertebrata) | 3.27e-09 | 23 |
neuroblast (sensu Vertebrata) | 3.27e-09 | 23 |
oligodendrocyte precursor cell | 5.21e-09 | 8 |
hippocampal neuron | 8.47e-08 | 3 |
migratory neural crest cell | 4.74e-07 | 10 |
neuron associated cell | 4.74e-07 | 10 |
glial cell (sensu Vertebrata) | 4.74e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 4.74e-07 | 10 |
glial cell | 4.74e-07 | 10 |
glioblast | 4.74e-07 | 10 |
glioblast (sensu Vertebrata) | 4.74e-07 | 10 |
striatum neuron | 5.13e-07 | 3 |
neuron | 9.20e-07 | 33 |
neuronal stem cell | 9.20e-07 | 33 |
neuroblast | 9.20e-07 | 33 |
electrically signaling cell | 9.20e-07 | 33 |