FFCP PHASE1:Hg19::chr2:21231621..21231630,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=338 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=603 | |||
|TSSclassifier=strong | |||
|UniProt=Q13789 | |||
|association_with_transcript=-105bp_to_X03324_5end | |||
|cluster_id=chr2:21231621..21231630,- | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_32_at_APOB_5end | |||
|id=chr2:21231621..21231630,- | |||
|ontology_enrichment_celltype=CL:0000181!1.34e-33!12;CL:0000417!1.34e-33!12;CL:0000668!1.34e-33!12;CL:0000414!1.34e-33!12;CL:0000412!1.34e-33!12;CL:0000182!1.34e-33!12;CL:0000223!1.04e-08!59 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.63e-54;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,4.17e-54,12;CL:0000223,3.57e-11,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;7.24e-41;11!UBERON:0009497;1.25e-34;13!UBERON:0001041;3.96e-15;30!UBERON:0003104;1.30e-14;31!CL:0000223;1.95e-08;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!3.96e-37!19;UBERON:0006925!3.96e-37!19;UBERON:0008836!3.96e-37!19;UBERON:0008835!5.77e-32!22;UBERON:0003894!5.77e-32!22;UBERON:0009854!1.53e-30!23;UBERON:0007499!4.88e-28!25;UBERON:0009497!4.88e-28!25;UBERON:0000015!4.88e-28!25;UBERON:0002423!4.88e-28!25;UBERON:0006235!4.88e-28!25;UBERON:0004161!4.88e-28!25;UBERON:0005057!6.26e-27!26;UBERON:0009856!6.26e-27!26;UBERON:0002365!1.86e-22!31;UBERON:0002330!1.86e-22!31;UBERON:0002368!8.50e-20!35;UBERON:0003929!9.22e-16!54;UBERON:0000949!3.30e-15!45;UBERON:0004921!1.23e-12!129;UBERON:0004185!1.23e-12!129;UBERON:0005172!2.79e-12!55;UBERON:0005173!2.79e-12!55;UBERON:0002530!2.18e-11!59;UBERON:0002417!5.53e-11!61;UBERON:0000916!5.53e-11!61;UBERON:0001007!3.24e-10!155;UBERON:0001555!3.24e-10!155;UBERON:0007026!3.24e-10!155;UBERON:0005911!5.39e-10!82;UBERON:0000160!1.23e-09!27;UBERON:0004119!3.23e-09!169;UBERON:0000925!3.23e-09!169;UBERON:0006595!3.23e-09!169;UBERON:0005409!1.80e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;2.93e-60;19!UBERON:0006925;2.93e-60;19!UBERON:0002423;9.21e-46;25!UBERON:0002365;1.87e-35;31!UBERON:0002330;1.87e-35;31!UBERON:0002368;2.68e-31;33!UBERON:0000949;7.33e-23;43!UBERON:0005172;1.22e-13;52!UBERON:0005173;1.22e-13;52!UBERON:0002417;5.47e-12;58!UBERON:0000916;5.47e-12;58!UBERON:0002530;7.43e-12;57!UBERON:0001007;4.73e-10;81 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.82e-60,19;UBERON:0006925,2.82e-60,19;UBERON:0008836,2.82e-60,19;UBERON:0008835,4.87e-52,22;UBERON:0003894,4.87e-52,22;UBERON:0009854,9.05e-50,23;UBERON:0007499,8.95e-46,25;UBERON:0009497,8.95e-46,25;UBERON:0000015,8.95e-46,25;UBERON:0002423,8.95e-46,25;UBERON:0006235,8.95e-46,25;UBERON:0004161,8.95e-46,25;UBERON:0009856,5.24e-44,26;UBERON:0002365,7.08e-37,31;UBERON:0002330,7.08e-37,31;UBERON:0002368,1.24e-32,35;UBERON:0000949,2.55e-25,45;UBERON:0003929,4.81e-21,54;UBERON:0005172,4.81e-21,54;UBERON:0005173,4.81e-21,54;UBERON:0002530,3.13e-19,59;UBERON:0002417,6.65e-19,60;UBERON:0000916,6.65e-19,60;UBERON:0005911,1.01e-13,82;UBERON:0001041,6.62e-13,87;UBERON:0004921,9.19e-12,118;UBERON:0005177,4.75e-11,101;UBERON:0009569,6.50e-10,112;UBERON:0001007,1.80e-09,145;UBERON:0001555,1.80e-09,145;UBERON:0007026,1.80e-09,145;UBERON:0003914,1.82e-09,117;UBERON:0005256,4.67e-09,122;UBERON:0004119,1.59e-08,160;UBERON:0000925,1.59e-08,160;UBERON:0006595,1.59e-08,160;UBERON:0000490,2.30e-07,148;UBERON:0011216,2.76e-07,223;UBERON:0000025,5.39e-07,192;UBERON:0001048,9.12e-07,160;UBERON:0003104,9.12e-07,160;UBERON:0009142,9.12e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.6755034821831,4.91413608338813,9.45263850690247,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.753150406214233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265372693510018,0.611030144933625,0,0,0,0,0,0,0,0,0,0,2.41981432097328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.07254410998172,3.87354534391482,3.43758073656343,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.4913879725274,3.97520666736664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31196068783506,0.655678681511872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p32@APOB | |||
}} |
Latest revision as of 23:15, 19 September 2015
Short description: | p32@APOB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_32_at_APOB_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | -105bp_to_X03324_5end |
EntrezGene: | APOB |
HGNC: | 603 |
UniProt: | Q13789 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 4.17e-54 | 12 |
endodermal cell | 3.57e-11 | 58 |