FFCP PHASE1:Mm9::chr10:13687439..13687456,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=21|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:13687439..13687456,-|id=chr10:13687439..13687456,-|ontology_enrichment_celltype=CL:0000838!3.93e-17!12;CL:0000084!1.10e-15!11;CL:0000827!1.10e-15!11;CL:0000542!1.59e-15!13;CL:0000051!1.59e-15!13;CL:0000988!2.36e-15!32;CL:0002032!2.36e-15!32;CL:0000037!2.36e-15!32;CL:0000566!2.36e-15!32;CL:0000837!2.36e-15!32;CL:0000791!7.44e-14!9;CL:0000789!7.44e-14!9;CL:0002420!7.44e-14!9;CL:0002419!7.44e-14!9;CL:0000790!7.44e-14!9;CL:0000738!6.83e-13!17;CL:0002087!6.83e-13!17;CL:0000624!2.17e-12!8;CL:0002031!1.02e-11!25;CL:0002320!5.38e-11!46;CL:0000134!5.38e-11!46;CL:0000893!1.58e-09!6;CL:0002489!1.58e-09!6;CL:0000898!1.58e-09!6;CL:0000809!1.58e-09!6;CL:0000810!1.58e-09!6;CL:0000895!1.58e-09!6;CL:0000808!1.58e-09!6;CL:0000894!1.58e-09!6;CL:0000806!1.58e-09!6;CL:0000807!1.58e-09!6;CL:0000805!1.58e-09!6;CL:0002425!1.58e-09!6;CL:0002436!1.58e-09!6;CL:0002427!1.58e-09!6;CL:0002428!1.58e-09!6;CL:0002429!1.58e-09!6;CL:0002433!1.58e-09!6;CL:0002431!1.58e-09!6;CL:0002432!1.58e-09!6;CL:0000219!2.92e-09!54;CL:0000063!3.40e-07!66;CL:0000034!5.35e-07!97|ontology_enrichment_celltype_v019_2=CL:0000791,2.57e-37,9;CL:0000789,2.57e-37,9;CL:0002420,2.57e-37,9;CL:0002419,2.57e-37,9;CL:0000790,2.57e-37,9;CL:0000838,3.31e-35,12;CL:0000542,2.01e-32,13;CL:0000051,2.01e-32,13;CL:0000624,3.89e-32,8;CL:0000084,2.16e-30,11;CL:0000827,2.16e-30,11;CL:0000738,1.49e-24,17;CL:0002087,1.49e-24,17;CL:0000893,4.11e-22,6;CL:0002489,4.11e-22,6;CL:0000898,4.11e-22,6;CL:0000809,4.11e-22,6;CL:0000810,4.11e-22,6;CL:0000895,4.11e-22,6;CL:0000808,4.11e-22,6;CL:0000894,4.11e-22,6;CL:0000806,4.11e-22,6;CL:0000807,4.11e-22,6;CL:0000805,4.11e-22,6;CL:0002425,4.11e-22,6;CL:0002436,4.11e-22,6;CL:0002427,4.11e-22,6;CL:0002428,4.11e-22,6;CL:0002429,4.11e-22,6;CL:0002433,4.11e-22,6;CL:0002431,4.11e-22,6;CL:0002432,4.11e-22,6;CL:0002031,2.39e-16,25;CL:0000988,2.39e-15,32;CL:0002032,2.39e-15,32;CL:0000037,2.39e-15,32;CL:0000837,2.39e-15,32;CL:0002320,2.90e-10,46;CL:0000134,2.90e-10,46;CL:0000219,1.55e-08,54;CL:0000815,5.73e-07,1;CL:0000792,5.73e-07,1;CL:0000625,7.38e-07,1;CL:0000945,9.48e-07,1;CL:0000236,9.48e-07,1;CL:0000826,9.48e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!5.41e-16!23;UBERON:0000974!5.41e-16!23;UBERON:0004807!5.41e-16!23;UBERON:0005058!5.41e-16!23;UBERON:0003351!5.41e-16!23;UBERON:0009113!5.41e-16!23;UBERON:0003295!5.41e-16!23;UBERON:0009722!5.41e-16!23;UBERON:0005562!5.41e-16!23;UBERON:0007690!5.41e-16!23;UBERON:0006562!4.26e-15!24;UBERON:0003408!4.26e-15!24;UBERON:0001557!4.26e-15!24;UBERON:0001042!4.26e-15!24;UBERON:0008814!4.26e-15!24;UBERON:0009145!4.26e-15!24;UBERON:0000072!1.64e-14!27;UBERON:0002390!5.51e-13!45;UBERON:0003061!5.51e-13!45;UBERON:0002193!5.82e-13!48;UBERON:0004177!6.35e-13!29;UBERON:0000063!3.18e-12!35;UBERON:0007811!2.12e-11!86;UBERON:0000153!3.08e-11!94;UBERON:0002384!5.38e-11!46;UBERON:0000064!8.43e-11!99;UBERON:0000065!1.49e-09!41;UBERON:0001004!3.46e-09!42;UBERON:0002405!2.28e-07!70|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.04e-10,23;UBERON:0000974,1.04e-10,23;UBERON:0004807,1.04e-10,23;UBERON:0005058,1.04e-10,23;UBERON:0003351,1.04e-10,23;UBERON:0009113,1.04e-10,23;UBERON:0003295,1.04e-10,23;UBERON:0009722,1.04e-10,23;UBERON:0005562,1.04e-10,23;UBERON:0007690,1.04e-10,23;UBERON:0002384,2.90e-10,46;UBERON:0006562,3.10e-10,24;UBERON:0003408,3.10e-10,24;UBERON:0001557,3.10e-10,24;UBERON:0001042,3.10e-10,24;UBERON:0008814,3.10e-10,24;UBERON:0009145,3.10e-10,24;UBERON:0000072,5.08e-09,27;UBERON:0004177,2.38e-08,29;UBERON:0005057,2.38e-08,29;UBERON:0000077,8.55e-07,35|phase1_expression=0,0,0,0,0,0,0,5.4231795845462,1.267098499365,1.63845168425395,1.36974374580404,0.398860794976682,3.42401459862411,2.71003247498892,0,0,0.699561878128147,0.630924330716475,0.137114433605739,0,0,0.297872853602656,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,2.68452169692378,1.45072428402269,3.36093799142464,0,0,0,0,0,0,0,0.889294796111139,0,0,0,0.299600110518405,0,0,0.405017814995072,0,0,0,0,0,0,0,0,0,0.131886287730194,0.0914876436024097,0,0,0,0.15279824777681,0,0.142371680799103,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505524445014783,0,0.517875767294343,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0.599075622529601,0.599902730993408,0.254140454146129,0.149790639404823,0.915001205637253,0.125654352112864,0.173824320192276,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0.205782136407943,0,0.702213187313235,1.02939162845886,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0.283076530788832,0,0,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0.0603129249281559,0,0,0,0,0.170870880797853,0,0,0,0,0,1.35982743995084,1.11961161858926,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89606672376907,0,0.102710957164827,0,0.358053391334963,0.39736270956253,0.120195449519969,0.590758108698309,0.807731599585181,0.0762068066549998,0.806609481094724,0.584747284438515,0.865906574762965,1.63627663054197,0,0,0,0,0,0,0,0,0,1.12950368523413,0,0,0.171853182343688,0,0,1.35004500046361,0.45032120322422,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr10:13687439..13687456,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=21 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:13687439..13687456,- | |||
|description=CAGE_peak_at_chr10:13687439..13687456,- | |||
|id=chr10:13687439..13687456,- | |||
|ontology_enrichment_celltype=CL:0000838!3.93e-17!12;CL:0000084!1.10e-15!11;CL:0000827!1.10e-15!11;CL:0000542!1.59e-15!13;CL:0000051!1.59e-15!13;CL:0000988!2.36e-15!32;CL:0002032!2.36e-15!32;CL:0000037!2.36e-15!32;CL:0000566!2.36e-15!32;CL:0000837!2.36e-15!32;CL:0000791!7.44e-14!9;CL:0000789!7.44e-14!9;CL:0002420!7.44e-14!9;CL:0002419!7.44e-14!9;CL:0000790!7.44e-14!9;CL:0000738!6.83e-13!17;CL:0002087!6.83e-13!17;CL:0000624!2.17e-12!8;CL:0002031!1.02e-11!25;CL:0002320!5.38e-11!46;CL:0000134!5.38e-11!46;CL:0000893!1.58e-09!6;CL:0002489!1.58e-09!6;CL:0000898!1.58e-09!6;CL:0000809!1.58e-09!6;CL:0000810!1.58e-09!6;CL:0000895!1.58e-09!6;CL:0000808!1.58e-09!6;CL:0000894!1.58e-09!6;CL:0000806!1.58e-09!6;CL:0000807!1.58e-09!6;CL:0000805!1.58e-09!6;CL:0002425!1.58e-09!6;CL:0002436!1.58e-09!6;CL:0002427!1.58e-09!6;CL:0002428!1.58e-09!6;CL:0002429!1.58e-09!6;CL:0002433!1.58e-09!6;CL:0002431!1.58e-09!6;CL:0002432!1.58e-09!6;CL:0000219!2.92e-09!54;CL:0000063!3.40e-07!66;CL:0000034!5.35e-07!97 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.57e-37,9;CL:0000789,2.57e-37,9;CL:0002420,2.57e-37,9;CL:0002419,2.57e-37,9;CL:0000790,2.57e-37,9;CL:0000838,3.31e-35,12;CL:0000542,2.01e-32,13;CL:0000051,2.01e-32,13;CL:0000624,3.89e-32,8;CL:0000084,2.16e-30,11;CL:0000827,2.16e-30,11;CL:0000738,1.49e-24,17;CL:0002087,1.49e-24,17;CL:0000893,4.11e-22,6;CL:0002489,4.11e-22,6;CL:0000898,4.11e-22,6;CL:0000809,4.11e-22,6;CL:0000810,4.11e-22,6;CL:0000895,4.11e-22,6;CL:0000808,4.11e-22,6;CL:0000894,4.11e-22,6;CL:0000806,4.11e-22,6;CL:0000807,4.11e-22,6;CL:0000805,4.11e-22,6;CL:0002425,4.11e-22,6;CL:0002436,4.11e-22,6;CL:0002427,4.11e-22,6;CL:0002428,4.11e-22,6;CL:0002429,4.11e-22,6;CL:0002433,4.11e-22,6;CL:0002431,4.11e-22,6;CL:0002432,4.11e-22,6;CL:0002031,2.39e-16,25;CL:0000988,2.39e-15,32;CL:0002032,2.39e-15,32;CL:0000037,2.39e-15,32;CL:0000837,2.39e-15,32;CL:0002320,2.90e-10,46;CL:0000134,2.90e-10,46;CL:0000219,1.55e-08,54;CL:0000815,5.73e-07,1;CL:0000792,5.73e-07,1;CL:0000625,7.38e-07,1;CL:0000945,9.48e-07,1;CL:0000236,9.48e-07,1;CL:0000826,9.48e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!5.41e-16!23;UBERON:0000974!5.41e-16!23;UBERON:0004807!5.41e-16!23;UBERON:0005058!5.41e-16!23;UBERON:0003351!5.41e-16!23;UBERON:0009113!5.41e-16!23;UBERON:0003295!5.41e-16!23;UBERON:0009722!5.41e-16!23;UBERON:0005562!5.41e-16!23;UBERON:0007690!5.41e-16!23;UBERON:0006562!4.26e-15!24;UBERON:0003408!4.26e-15!24;UBERON:0001557!4.26e-15!24;UBERON:0001042!4.26e-15!24;UBERON:0008814!4.26e-15!24;UBERON:0009145!4.26e-15!24;UBERON:0000072!1.64e-14!27;UBERON:0002390!5.51e-13!45;UBERON:0003061!5.51e-13!45;UBERON:0002193!5.82e-13!48;UBERON:0004177!6.35e-13!29;UBERON:0000063!3.18e-12!35;UBERON:0007811!2.12e-11!86;UBERON:0000153!3.08e-11!94;UBERON:0002384!5.38e-11!46;UBERON:0000064!8.43e-11!99;UBERON:0000065!1.49e-09!41;UBERON:0001004!3.46e-09!42;UBERON:0002405!2.28e-07!70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.04e-10,23;UBERON:0000974,1.04e-10,23;UBERON:0004807,1.04e-10,23;UBERON:0005058,1.04e-10,23;UBERON:0003351,1.04e-10,23;UBERON:0009113,1.04e-10,23;UBERON:0003295,1.04e-10,23;UBERON:0009722,1.04e-10,23;UBERON:0005562,1.04e-10,23;UBERON:0007690,1.04e-10,23;UBERON:0002384,2.90e-10,46;UBERON:0006562,3.10e-10,24;UBERON:0003408,3.10e-10,24;UBERON:0001557,3.10e-10,24;UBERON:0001042,3.10e-10,24;UBERON:0008814,3.10e-10,24;UBERON:0009145,3.10e-10,24;UBERON:0000072,5.08e-09,27;UBERON:0004177,2.38e-08,29;UBERON:0005057,2.38e-08,29;UBERON:0000077,8.55e-07,35 | |||
|phase1_expression=0,0,0,0,0,0,0,5.4231795845462,1.267098499365,1.63845168425395,1.36974374580404,0.398860794976682,3.42401459862411,2.71003247498892,0,0,0.699561878128147,0.630924330716475,0.137114433605739,0,0,0.297872853602656,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194429899074283,0,0,2.68452169692378,1.45072428402269,3.36093799142464,0,0,0,0,0,0,0,0.889294796111139,0,0,0,0.299600110518405,0,0,0.405017814995072,0,0,0,0,0,0,0,0,0,0.131886287730194,0.0914876436024097,0,0,0,0.15279824777681,0,0.142371680799103,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.505524445014783,0,0.517875767294343,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0.599075622529601,0.599902730993408,0.254140454146129,0.149790639404823,0.915001205637253,0.125654352112864,0.173824320192276,0,0,0.162241263067758,0,0,0,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0.205782136407943,0,0.702213187313235,1.02939162845886,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0,0,0.117211686592203,0,0,0,0,0,0,0,0.283076530788832,0,0,0,1.28528526568723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0.0603129249281559,0,0,0,0,0.170870880797853,0,0,0,0,0,1.35982743995084,1.11961161858926,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89606672376907,0,0.102710957164827,0,0.358053391334963,0.39736270956253,0.120195449519969,0.590758108698309,0.807731599585181,0.0762068066549998,0.806609481094724,0.584747284438515,0.865906574762965,1.63627663054197,0,0,0,0,0,0,0,0,0,1.12950368523413,0,0,0.171853182343688,0,0,1.35004500046361,0.45032120322422,0.453142408984205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:13687439..13687456,- | |||
}} |
Latest revision as of 04:04, 4 August 2015
Short description: | p@chr10:13687439..13687456, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:13687439..13687456, - |
Coexpression cluster: | MCL_coexpression_mm9:21 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 1.04e-10 | 23 |
neck | 1.04e-10 | 23 |
respiratory system epithelium | 1.04e-10 | 23 |
hemolymphoid system gland | 1.04e-10 | 23 |
pharyngeal epithelium | 1.04e-10 | 23 |
thymic region | 1.04e-10 | 23 |
pharyngeal gland | 1.04e-10 | 23 |
entire pharyngeal arch endoderm | 1.04e-10 | 23 |
thymus primordium | 1.04e-10 | 23 |
early pharyngeal endoderm | 1.04e-10 | 23 |
connective tissue | 2.90e-10 | 46 |
pharynx | 3.10e-10 | 24 |
gland of gut | 3.10e-10 | 24 |
upper respiratory tract | 3.10e-10 | 24 |
chordate pharynx | 3.10e-10 | 24 |
pharyngeal arch system | 3.10e-10 | 24 |
pharyngeal region of foregut | 3.10e-10 | 24 |
segment of respiratory tract | 5.08e-09 | 27 |
hemopoietic organ | 2.38e-08 | 29 |
immune organ | 2.38e-08 | 29 |
mixed endoderm/mesoderm-derived structure | 8.55e-07 | 35 |