FFCP PHASE1:Hg19::chr22:38508583..38508599,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8398 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9039 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=262bp_to_ENST00000463287_5end | |||
|cluster_id=chr22:38508583..38508599,- | |||
|coexpression_cluster_id=C25 | |||
|description=CAGE_peak_13_at_PLA2G6_5end | |||
|id=chr22:38508583..38508599,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002178;2.74e-12;3!CL:0002569;8.72e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002178,2.59e-12,3;CL:0002569,8.97e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3493!5.51e-14!2;DOID:4929!2.81e-13!2;DOID:178!2.35e-07!1;DOID:326!2.35e-07!1;DOID:3978!2.35e-07!1;DOID:3394!2.35e-07!1;DOID:5844!2.35e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:3493;5.53e-66;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,2.84e-66,2 | |||
|ontology_enrichment_uberon=UBERON:0000160!4.34e-13!27;UBERON:0005409!1.34e-12!35;UBERON:0001007!8.41e-08!155;UBERON:0001555!8.41e-08!155;UBERON:0007026!8.41e-08!155;UBERON:0001736!1.33e-07!1;UBERON:0006298!1.33e-07!1;UBERON:0000998!1.42e-07!1;UBERON:0006868!1.42e-07!1;UBERON:0000997!1.61e-07!1;UBERON:0005056!1.61e-07!1;UBERON:0004921!1.64e-07!129;UBERON:0004185!1.64e-07!129;UBERON:0001154!1.72e-07!1;UBERON:0001153!1.72e-07!1;UBERON:0004913!2.83e-07!1;UBERON:0003703!2.83e-07!1;UBERON:0001174!2.83e-07!1;UBERON:0004914!2.83e-07!1;UBERON:0004119!6.97e-07!169;UBERON:0000925!6.97e-07!169;UBERON:0006595!6.97e-07!169;UBERON:0002108!7.26e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;9.86e-18;2!UBERON:0002757;9.86e-18;2!UBERON:0010134;9.86e-18;2!UBERON:0005408;9.86e-18;2!UBERON:0001899;9.86e-18;2!UBERON:0005409;9.85e-14;22!UBERON:0003296;1.50e-09;4!UBERON:0010133;1.50e-09;4!UBERON:0002784;1.50e-09;4!UBERON:0004921;2.53e-09;33!UBERON:0000160;2.09e-08;17!UBERON:0002108;5.35e-08;4!UBERON:0000945;6.78e-08;5!UBERON:0010039;6.78e-08;5!UBERON:0003422;8.72e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,1.27e-17,2;UBERON:0002757,1.27e-17,2;UBERON:0010134,1.27e-17,2;UBERON:0005408,1.27e-17,2;UBERON:0001899,1.27e-17,2;UBERON:0005409,3.01e-12,25;UBERON:0003296,1.70e-09,4;UBERON:0010133,1.70e-09,4;UBERON:0002784,1.70e-09,4;UBERON:0000160,2.09e-08,17;UBERON:0002108,5.35e-08,4;UBERON:0003422,8.97e-07,6 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.561421621224659,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,2.12298154808014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293977192243133,0,0,0,0,0,0.0821154570532092,0,0,0,0,0,0,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183428598521679,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,1.07140367175657,0,0,0,0,0,0,0,0,0,0,0,0,0.560544326627578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,1.27595303699816,1.34109717480496,0,0,0,0,0,0,0,0,0,0,5.09349443512435,0.655678681511872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0,0,0,0,0,0,0.628776414746108,0,0,0,0,0,0 | |||
|short_description=p13@PLA2G6 | |||
}} |
Latest revision as of 07:22, 20 September 2015
Short description: | p13@PLA2G6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_PLA2G6_5end |
Coexpression cluster: | C25_small_colon_temporal_duodenum_liver_Hepatocyte_gall |
Association with transcript: | 262bp_to_ENST00000463287_5end |
EntrezGene: | PLA2G6 |
HGNC: | 9039 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of stomach | 2.59e-12 | 3 |
mesenchymal stem cell of umbilical cord | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
pineal body | 1.27e-17 | 2 |
regional part of epithalamus | 1.27e-17 | 2 |
secretory circumventricular organ | 1.27e-17 | 2 |
circumventricular organ | 1.27e-17 | 2 |
epithalamus | 1.27e-17 | 2 |
gastrointestinal system | 3.01e-12 | 25 |
gland of diencephalon | 1.70e-09 | 4 |
neuroendocrine gland | 1.70e-09 | 4 |
regional part of diencephalon | 1.70e-09 | 4 |
intestine | 2.09e-08 | 17 |
small intestine | 5.35e-08 | 4 |
mesenchyme of umbilical cord | 8.97e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 2.84e-66 | 2 |