FFCP PHASE1:Hg19::chr20:22504822..22504839,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr20:22504822..22504839,- | |||
|coexpression_cluster_id=C703 | |||
|description=CAGE_peak_at_chr20:22504822..22504839,- | |||
|id=chr20:22504822..22504839,- | |||
|ontology_enrichment_celltype=CL:0000181!1.34e-31!12;CL:0000417!1.34e-31!12;CL:0000668!1.34e-31!12;CL:0000414!1.34e-31!12;CL:0000412!1.34e-31!12;CL:0000182!1.34e-31!12;CL:0000223!2.14e-13!59;CL:0002563!1.92e-11!4 | |||
|ontology_enrichment_celltype_v019=CL:0000182;3.72e-51;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,3.35e-51,12;CL:0000223,6.95e-11,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;7.08e-56;11!UBERON:0009497;2.27e-47;13!UBERON:0001041;8.65e-21;30!UBERON:0003104;4.48e-20;31 | |||
|ontology_enrichment_disease=DOID:305!7.52e-07!106 | |||
|ontology_enrichment_disease_v019=DOID:7;7.20e-10;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,1.54e-10,39 | |||
|ontology_enrichment_uberon=UBERON:0008835!5.30e-30!22;UBERON:0003894!5.30e-30!22;UBERON:0009854!1.16e-28!23;UBERON:0002107!6.53e-27!19;UBERON:0006925!6.53e-27!19;UBERON:0008836!6.53e-27!19;UBERON:0007499!2.64e-26!25;UBERON:0009497!2.64e-26!25;UBERON:0000015!2.64e-26!25;UBERON:0002423!2.64e-26!25;UBERON:0006235!2.64e-26!25;UBERON:0004161!2.64e-26!25;UBERON:0009856!2.91e-25!26;UBERON:0003929!3.90e-22!54;UBERON:0005057!1.65e-19!26;UBERON:0005911!8.81e-17!82;UBERON:0002365!2.91e-16!31;UBERON:0002330!2.91e-16!31;UBERON:0002368!2.49e-14!35;UBERON:0004921!9.37e-12!129;UBERON:0004185!9.37e-12!129;UBERON:0001242!1.92e-11!4;UBERON:0001262!1.92e-11!4;UBERON:0004786!1.92e-11!4;UBERON:0004808!1.92e-11!4;UBERON:0001277!1.92e-11!4;UBERON:0000949!5.37e-11!45;UBERON:0002530!1.18e-10!59;UBERON:0004119!5.02e-10!169;UBERON:0000925!5.02e-10!169;UBERON:0006595!5.02e-10!169;UBERON:0000077!6.64e-10!130;UBERON:0001007!1.82e-09!155;UBERON:0001555!1.82e-09!155;UBERON:0007026!1.82e-09!155;UBERON:0003350!2.47e-09!5;UBERON:0005172!7.17e-09!55;UBERON:0005173!7.17e-09!55;UBERON:0002417!6.28e-08!61;UBERON:0000916!6.28e-08!61;UBERON:0000490!1.08e-07!138;UBERON:0001041!1.35e-07!98 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.37e-46;19!UBERON:0006925;1.37e-46;19!UBERON:0002423;1.68e-35;25!UBERON:0002365;6.99e-28;31!UBERON:0002330;6.99e-28;31!UBERON:0002368;2.44e-22;33!UBERON:0000949;4.88e-18;43!UBERON:0005172;2.02e-10;52!UBERON:0005173;2.02e-10;52!UBERON:0002417;2.91e-10;58!UBERON:0000916;2.91e-10;58!UBERON:0002530;5.98e-08;57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.32e-46,19;UBERON:0006925,1.32e-46,19;UBERON:0008836,1.32e-46,19;UBERON:0008835,2.63e-40,22;UBERON:0003894,2.63e-40,22;UBERON:0009854,1.43e-38,23;UBERON:0007499,1.63e-35,25;UBERON:0009497,1.63e-35,25;UBERON:0000015,1.63e-35,25;UBERON:0002423,1.63e-35,25;UBERON:0006235,1.63e-35,25;UBERON:0004161,1.63e-35,25;UBERON:0009856,3.66e-34,26;UBERON:0002365,1.05e-28,31;UBERON:0002330,1.05e-28,31;UBERON:0002368,1.85e-25,35;UBERON:0000949,7.38e-20,45;UBERON:0003929,1.39e-16,54;UBERON:0005172,1.39e-16,54;UBERON:0005173,1.39e-16,54;UBERON:0002530,3.42e-15,59;UBERON:0002417,6.09e-15,60;UBERON:0000916,6.09e-15,60;UBERON:0005911,5.77e-11,82;UBERON:0001041,2.44e-10,87;UBERON:0005177,6.51e-09,101;UBERON:0009569,4.87e-08,112;UBERON:0003914,1.07e-07,117;UBERON:0004921,1.45e-07,118;UBERON:0005256,2.22e-07,122 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,2.95394953340702,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.846016147141356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.09123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07116361708914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251932747854276,0,0,0,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.848118428603645,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514784993585894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.32991899054908,1.6544468284517,1.56590130924216,1.55028150864625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.07759690723973,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr20:22504822..22504839,- | |||
}} |
Latest revision as of 12:26, 28 July 2015
Short description: | p@chr20:22504822..22504839, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:22504822..22504839, - |
Coexpression cluster: | C703_liver_hepatocellular_Hepatocyte_hepatoblastoma_colon_gastrointestinal_mature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 3.35e-51 | 12 |
endodermal cell | 6.95e-11 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 1.32e-46 | 19 |
digestive gland | 1.32e-46 | 19 |
liver bud | 1.32e-46 | 19 |
hepatic diverticulum | 2.63e-40 | 22 |
liver primordium | 2.63e-40 | 22 |
digestive tract diverticulum | 1.43e-38 | 23 |
epithelial sac | 1.63e-35 | 25 |
epithelium of foregut-midgut junction | 1.63e-35 | 25 |
anatomical boundary | 1.63e-35 | 25 |
hepatobiliary system | 1.63e-35 | 25 |
foregut-midgut junction | 1.63e-35 | 25 |
septum transversum | 1.63e-35 | 25 |
sac | 3.66e-34 | 26 |
exocrine gland | 1.05e-28 | 31 |
exocrine system | 1.05e-28 | 31 |
endocrine gland | 1.85e-25 | 35 |
endocrine system | 7.38e-20 | 45 |
gut epithelium | 1.39e-16 | 54 |
abdomen element | 1.39e-16 | 54 |
abdominal segment element | 1.39e-16 | 54 |
gland | 3.42e-15 | 59 |
abdominal segment of trunk | 6.09e-15 | 60 |
abdomen | 6.09e-15 | 60 |
endo-epithelium | 5.77e-11 | 82 |
foregut | 2.44e-10 | 87 |
trunk region element | 6.51e-09 | 101 |
subdivision of trunk | 4.87e-08 | 112 |
epithelial tube | 1.07e-07 | 117 |
subdivision of digestive tract | 1.45e-07 | 118 |
trunk mesenchyme | 2.22e-07 | 122 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 1.54e-10 | 39 |