FFCP PHASE1:Hg19::chr1:78695343..78695353,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=37bp_to_ENST00000413519_5end | |||
|cluster_id=chr1:78695343..78695353,+ | |||
|coexpression_cluster_id=C95 | |||
|description=CAGE_peak_2_at_ENST00000413519_5end | |||
|id=chr1:78695343..78695353,+ | |||
|ontology_enrichment_celltype=CL:0000594!2.87e-17!3;CL:0000188!6.85e-10!9;CL:0000153!1.09e-09!9;CL:0000447!1.09e-09!9;CL:0000667!1.12e-08!6;CL:0000058!1.12e-08!6;CL:0000138!1.12e-08!6;CL:0000135!2.39e-08!3;CL:0000386!2.39e-08!3;CL:0002564!2.39e-08!3;CL:0000388!2.39e-08!3;CL:0002623!5.07e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000594;2.35e-23;3!CL:0002564;1.12e-22;3!CL:0000680;5.30e-22;7!CL:0002602;1.27e-09;2!CL:0000188;1.97e-08;9!CL:0000135;7.92e-07;3!CL:0000388;7.92e-07;3!CL:0000515;9.64e-07;3!CL:0002623;9.64e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000594,2.35e-23,3;CL:0002564,1.25e-22,3;CL:0002602,1.33e-09,2;CL:0000188,1.97e-08,9;CL:0000135,7.70e-07,3;CL:0000388,7.70e-07,3;CL:0002623,9.64e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000043!2.39e-08!3;UBERON:0002242!2.39e-08!3;UBERON:0003068!2.39e-08!3;UBERON:0002328!2.39e-08!3;UBERON:0004880!2.39e-08!3;UBERON:0002171!4.09e-07!1;UBERON:0006518!4.09e-07!1;UBERON:0008949!4.09e-07!1;UBERON:0000101!4.09e-07!1;UBERON:0002167!4.09e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0011135;4.95e-30;5!UBERON:0002216;4.95e-30;5!UBERON:0011134;4.95e-30;5!UBERON:0002209;4.95e-30;5!UBERON:0002213;4.95e-30;5!UBERON:0007844;4.95e-30;5!UBERON:0011138;4.95e-30;5!UBERON:0001130;4.95e-30;5!UBERON:0001066;4.95e-30;5!UBERON:0001468;4.95e-30;5!UBERON:0002242;1.12e-22;3!UBERON:0004905;4.63e-19;8!UBERON:0000982;4.63e-19;8!UBERON:0004770;4.63e-19;8!UBERON:0002171;2.66e-18;1!UBERON:0006518;2.66e-18;1!UBERON:0008949;2.66e-18;1!UBERON:0000101;2.66e-18;1!UBERON:0002167;2.66e-18;1!UBERON:0001134;5.38e-10;16!UBERON:0002036;5.38e-10;16!UBERON:0000075;7.42e-10;16!UBERON:0006444;1.27e-09;2!UBERON:0001995;1.27e-09;2!UBERON:0004715;1.27e-09;2!UBERON:0002204;3.53e-07;70!UBERON:0002418;7.92e-07;3!UBERON:0007846;7.92e-07;3!UBERON:0004755;7.92e-07;3!UBERON:0000043;7.92e-07;3!UBERON:0007845;7.92e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0011135,5.75e-30,5;UBERON:0002216,5.75e-30,5;UBERON:0011134,5.75e-30,5;UBERON:0002209,5.75e-30,5;UBERON:0002213,5.75e-30,5;UBERON:0005856,5.75e-30,5;UBERON:0005866,5.75e-30,5;UBERON:0005863,5.75e-30,5;UBERON:0007844,5.75e-30,5;UBERON:0011138,5.75e-30,5;UBERON:0001130,5.75e-30,5;UBERON:0001066,5.75e-30,5;UBERON:0001468,5.75e-30,5;UBERON:0002242,1.25e-22,3;UBERON:0003068,1.25e-22,3;UBERON:0002328,1.25e-22,3;UBERON:0004880,1.25e-22,3;UBERON:0004905,5.08e-19,8;UBERON:0000982,5.08e-19,8;UBERON:0004770,5.08e-19,8;UBERON:0002171,2.66e-18,1;UBERON:0006518,2.66e-18,1;UBERON:0008949,2.66e-18,1;UBERON:0000101,2.66e-18,1;UBERON:0002167,2.66e-18,1;UBERON:0000075,7.77e-10,16;UBERON:0006444,1.33e-09,2;UBERON:0001995,1.33e-09,2;UBERON:0004715,1.33e-09,2;UBERON:0007846,7.70e-07,3;UBERON:0000043,7.70e-07,3;UBERON:0007845,7.70e-07,3;UBERON:0002418,8.15e-07,3;UBERON:0004755,8.15e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,2.47532705920093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.50133791063589,1.59331170856906,0,0.486634870302636,0,0,0,0.392937226493138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,1.2328579353023,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34960640891054,1.00034104211935,0,0,0,0,0,0.601892199455438,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721287081534056,0,0,0,0,0,0,0,0,0,8.80846007919844,4.49551751134108,0.255679882248303,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.193978032976839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717873024576814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.01900839068165,0.471612915298998,19.4692356013182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251567901752575,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24329698497822,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.743990036333503,2.77305377178851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12729431655633,0,0,0,0,0.143444410785353,0,0,0,0,0,0,0,0,0.665756774185513,0,0 | |||
|short_description=p2@ENST00000413519 | |||
}} |
Latest revision as of 10:31, 28 July 2015
Short description: | p2@ENST00000413519 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000413519_5end |
Coexpression cluster: | C95_lung_aorta_trachea_penis_Alveolar_throat_endometrioid |
Association with transcript: | 37bp_to_ENST00000413519_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skeletal muscle satellite cell | 2.35e-23 | 3 |
nucleus pulposus cell of intervertebral disc | 1.25e-22 | 3 |
annulus pulposus cell | 1.33e-09 | 2 |
cell of skeletal muscle | 1.97e-08 | 9 |
fibrocyte | 7.70e-07 | 3 |
tendon cell | 7.70e-07 | 3 |
acinar cell of salivary gland | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intervertebral cartilage | 5.75e-30 | 5 |
symphysis | 5.75e-30 | 5 |
nonsynovial joint | 5.75e-30 | 5 |
fibrous joint | 5.75e-30 | 5 |
cartilaginous joint | 5.75e-30 | 5 |
developing mesenchymal condensation | 5.75e-30 | 5 |
pre-cartilage condensation | 5.75e-30 | 5 |
cartilaginous condensation | 5.75e-30 | 5 |
cartilage element | 5.75e-30 | 5 |
post-cranial axial skeletal system | 5.75e-30 | 5 |
vertebral column | 5.75e-30 | 5 |
intervertebral disk | 5.75e-30 | 5 |
intervertebral joint | 5.75e-30 | 5 |
nucleus pulposus | 1.25e-22 | 3 |
axial mesoderm | 1.25e-22 | 3 |
notochord | 1.25e-22 | 3 |
chordamesoderm | 1.25e-22 | 3 |
articulation | 5.08e-19 | 8 |
skeletal joint | 5.08e-19 | 8 |
articular system | 5.08e-19 | 8 |
lower lobe of right lung | 2.66e-18 | 1 |
right lung lobe | 2.66e-18 | 1 |
lower lobe of lung | 2.66e-18 | 1 |
lobe of lung | 2.66e-18 | 1 |
right lung | 2.66e-18 | 1 |
subdivision of skeletal system | 7.77e-10 | 16 |
annulus fibrosus | 1.33e-09 | 2 |
fibrocartilage | 1.33e-09 | 2 |
annulus fibrosus disci intervertebralis | 1.33e-09 | 2 |
dense regular connective tissue | 7.70e-07 | 3 |
tendon | 7.70e-07 | 3 |
regular connective tissue | 7.70e-07 | 3 |
cartilage tissue | 8.15e-07 | 3 |
skeletal tissue | 8.15e-07 | 3 |