FFCP PHASE1:Hg19::chr1:59042917..59042931,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4070 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11530 | |||
|TSSclassifier=strong | |||
|UniProt=P09758 | |||
|association_with_transcript=234bp_to_ENST00000371225,NM_002353,uc001cyz.3_5end | |||
|cluster_id=chr1:59042917..59042931,- | |||
|coexpression_cluster_id=C1844 | |||
|description=CAGE_peak_1_at_TACSTD2_5end | |||
|id=chr1:59042917..59042931,- | |||
|ontology_enrichment_celltype=CL:0000066!2.98e-26!254;CL:0002076!3.27e-13!43;CL:0000223!6.73e-09!59;CL:0002368!1.33e-07!13;CL:1000449!3.80e-07!16;CL:0000063!7.80e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.75e-13;42!CL:1000449;2.11e-09;15!CL:0002368;4.54e-09;13!CL:0002251;5.59e-08;20!CL:0002681;8.10e-08;12!CL:0002584;8.10e-08;12!CL:1000497;1.18e-07;17!CL:0002518;1.18e-07;17!CL:1000507;9.76e-07;10!CL:1000494;9.76e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,5.28e-30,253;CL:0002076,7.90e-18,42;CL:0000223,2.59e-11,58;CL:1000449,2.00e-09,15;CL:0002368,4.55e-09,13;CL:0002251,5.58e-08,20;CL:0002681,7.75e-08,12;CL:0002584,7.75e-08,12;CL:1000497,1.14e-07,17;CL:0002518,1.14e-07,17;CL:0000076,5.29e-07,63;CL:1000507,9.20e-07,10;CL:1000494,9.20e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!1.53e-09!14;DOID:305!1.43e-08!106 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.51e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.52e-10,14;DOID:305,1.06e-09,106 | |||
|ontology_enrichment_uberon=UBERON:0000464!8.76e-14!104;UBERON:0004119!2.98e-13!169;UBERON:0000925!2.98e-13!169;UBERON:0006595!2.98e-13!169;UBERON:0000468!1.05e-12!659;UBERON:0001004!1.35e-12!72;UBERON:0000466!9.97e-12!126;UBERON:0000467!2.11e-11!625;UBERON:0000480!3.24e-11!626;UBERON:0002553!4.98e-10!70;UBERON:0000062!1.44e-09!511;UBERON:0001007!3.92e-09!155;UBERON:0001555!3.92e-09!155;UBERON:0007026!3.92e-09!155;UBERON:0000065!6.74e-09!53;UBERON:0001008!8.45e-09!45;UBERON:0000077!1.27e-08!130;UBERON:0006554!2.01e-08!44;UBERON:0000926!2.50e-08!448;UBERON:0004120!2.50e-08!448;UBERON:0006603!2.50e-08!448;UBERON:0000161!2.63e-08!35;UBERON:0000058!4.49e-08!26;UBERON:0000922!5.96e-08!612;UBERON:0000080!7.26e-08!18;UBERON:0002120!7.26e-08!18;UBERON:0004875!7.26e-08!18;UBERON:0005721!7.26e-08!18;UBERON:0005754!7.26e-08!18;UBERON:0007297!7.26e-08!18;UBERON:0003886!9.34e-08!63;UBERON:0006555!1.67e-07!17;UBERON:0005103!1.67e-07!17;UBERON:0000083!1.67e-07!17;UBERON:0009201!1.67e-07!17;UBERON:0004819!1.67e-07!17;UBERON:0006553!1.67e-07!17;UBERON:0003074!1.67e-07!17;UBERON:0003060!1.67e-07!17;UBERON:0004876!2.00e-07!20;UBERON:0004921!2.58e-07!129;UBERON:0004185!2.58e-07!129;UBERON:0004211!3.80e-07!16;UBERON:0001285!3.80e-07!16;UBERON:0007684!3.80e-07!16;UBERON:0003220!3.80e-07!16;UBERON:0004208!3.80e-07!16;UBERON:0002050!4.65e-07!605;UBERON:0005423!4.65e-07!605;UBERON:0003064!5.51e-07!37;UBERON:0000166!5.56e-07!21;UBERON:0000923!7.68e-07!604;UBERON:0005291!7.68e-07!604;UBERON:0006598!7.68e-07!604;UBERON:0002532!7.68e-07!604;UBERON:0003887!7.91e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0006555;2.11e-09;15!UBERON:0004819;2.11e-09;15!UBERON:0001285;2.11e-09;15!UBERON:0007684;2.11e-09;15!UBERON:0006554;3.54e-09;30!UBERON:0001008;3.54e-09;30!UBERON:0001225;8.10e-08;12!UBERON:0008987;8.10e-08;12!UBERON:0000353;1.60e-07;15!UBERON:0000065;4.79e-07;44!UBERON:0001004;6.29e-07;65!UBERON:0004211;9.76e-07;10!UBERON:0009773;9.76e-07;10!UBERON:0001231;9.76e-07;10!UBERON:0004810;9.76e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,1.31e-17,160;UBERON:0000925,1.31e-17,160;UBERON:0006595,1.31e-17,160;UBERON:0001004,3.79e-14,74;UBERON:0001008,2.58e-13,48;UBERON:0006554,7.90e-13,47;UBERON:0001007,1.90e-12,145;UBERON:0001555,1.90e-12,145;UBERON:0007026,1.90e-12,145;UBERON:0004921,4.66e-11,118;UBERON:0000065,7.33e-11,54;UBERON:0006555,7.59e-10,16;UBERON:0004819,7.59e-10,16;UBERON:0000161,1.82e-09,36;UBERON:0004211,2.00e-09,15;UBERON:0009773,2.00e-09,15;UBERON:0001231,2.00e-09,15;UBERON:0001285,2.00e-09,15;UBERON:0007684,2.00e-09,15;UBERON:0004208,2.00e-09,15;UBERON:0001041,6.52e-09,87;UBERON:0005911,2.45e-08,82;UBERON:0005156,4.45e-08,59;UBERON:0000990,4.45e-08,59;UBERON:0008947,4.66e-08,38;UBERON:0003258,4.66e-08,38;UBERON:0005423,5.02e-08,581;UBERON:0000922,5.06e-08,592;UBERON:0001225,7.75e-08,12;UBERON:0008987,7.75e-08,12;UBERON:0000072,1.20e-07,47;UBERON:0000353,1.53e-07,15;UBERON:0009569,2.17e-07,112;UBERON:0000166,3.80e-07,22;UBERON:0002553,4.12e-07,61;UBERON:0003133,6.93e-07,48;UBERON:0005631,7.26e-07,14;UBERON:0000158,7.26e-07,14;UBERON:0000058,7.68e-07,19;UBERON:0005153,8.88e-07,37;UBERON:0004810,9.20e-07,10 | |||
|phase1_expression=3.27021082687002,3.8538094300377,13.9544860055011,3.00219895059391,15.6436383049551,4.36169262050184,15.1979926900986,1.26343974685366,1.04474251279935,637.679565221415,1948.26086097902,493.022176897799,485.331239940355,0.123766352960047,0.994192127183747,0,0,0,0,0.369363174230364,1.22400414746552,0,0,0.136874425072884,0,0,0,0,0.786728553697808,1.91914699048606,20.9001766476703,918.501803254448,658.737344368033,609.724362765033,0,0,0.293600439334847,2.76997704265939,0,0,0,0,0,0.145398238779565,30.2300754951048,1.4555043671269,0,15.6243797448294,0.929119112685311,0,10.5025889676931,0,1.72372840368309,18.719055823931,1.35426486594342,0.752969358170419,20.7408674043963,0.898893937780338,1.53041946185451,35.6231220054464,1.27867425159808,0.329851300186716,11.1699648268114,0.852449501065388,0,9.64554881974938,0,0,6.77927793946262,0.217188844705117,54.4859552370032,15.4676607114777,0.632924774881769,0,0.212604299965044,0,0,1.65194582125657,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511450247374121,0,0,0.579386075843295,0,7.29952305453954,0.0945348171640679,0.443458794925128,1.14185221401064,81.9929012615681,2065.91857990701,1627.00213493808,345.967521635892,369.329172811746,120.193996309054,0,0,0.371457501329565,2.58391129576717,0,6.2485290289367,2.82653970962005,0.419499436209906,0,3.55291443112578,330.256618218402,314.141609952365,215.560074620448,40.6857610280238,12.9246257972147,25.870578100106,14.3388601334889,0.81014194788176,35.5412918570637,17.0642323195889,10.5854791654323,29.1301611185178,23.7316414892032,7.5112715011467,0,7.75560528296651,1837.70033572864,0.496971951695318,0.12663051166458,0,0.286836620748814,3.54668382198357,1.68203280042692,0,0,0,0,0.163461903113459,0,0,0,10.6134426122309,7.41613368007784,0.149448680551801,0,0.485618833104395,0,0,0.368502951935304,0.103325781175765,0,0,0.910161361938026,2.15585442544872,0,0.625592599359821,0,0,0,0.45071417671979,0,0.89694817844431,1.06778694409284,0,0.300091096084402,0.206105058476878,0.772921620136887,2.97786970130544,0.168776332241266,0,0.252433774244115,0.0920498986422993,0,0.710019185033229,0.503760491138201,0.169560592310488,1299.67923752317,622.952139429466,652.767259105373,0.853815942907168,0.265059536642971,0.580969714347592,5.49403591581463,1.26160425437814,0,3.12899064659632,2.57296375277154,1.38134921352481,0,0,4.73227200159376,7.92348043367078,5.06123162755312,6.83822630940842,5.88274499049497,5.45722423955522,5.12358971008625,4.90553662813365,3.46272441251751,55.3616590968486,8.41450642820675,2.057870056657,0,0,0.982827216677626,0.590789906681404,0,41.4471037890293,0,711.730600874937,473.211381214578,416.592061673798,392.760184362483,0,0,0,0.231860809950154,0,12.5598809552134,3.24089858803628,15.0300780265333,674.834555857221,671.33617875819,0.984868024349589,94.3037188511128,44.5893486866185,518.348101946877,969.760826092016,684.773719680727,49.9736556681893,184.261917017852,495.713804160618,0,0.088048434013226,10.9883901236609,7.06187771743111,11.2355765749478,0.63497894292169,0,0,39.3466625852222,0.514137463516618,0,0,0,0,0,1.03417372606222,0,0.845302752556,0.26593811658487,0,0.257207374262142,0,0.266422179016099,0,0,0,0.65147236858747,0,0,0.301439377059586,0,0.199945982364114,2.43247561282381,0,4.21667878966063,0,0,0,0,0,0,0,1.37921532141349,0,0.641715181398742,0,0,0,0,0,1.49801404789436,0,0.828831026872071,0,0,0,0,0.178428988797162,0.157702415033935,0,1.50473049863859,15.9185252839189,12.4167685551006,0,1.65932251687533,0,0,0.343143423810856,0.82707210449155,0.862856803274467,0.320182673410333,333.440328590885,331.206524625889,272.453654290042,0,0.153461973288062,0.280660094433074,1.15325234330131,0.511707249066704,0.482561763430822,2.96836132889982,0.154209693802656,0.710246901252508,0.164254312027618,0,0.116210378459959,36.0161159783034,798.817777688287,924.861452872143,0,0,2.09799063935079,958.79917742825,639.689389989269,159.223003142902,320.044901990641,213.953151765859,158.089403858546,77.0524484902616,41.0240240594065,297.658597692258,1.62567862526312,16.0540727633553,541.866956493751,905.872849732309,119.101369512199,0,0,0,0.984043937099117,0,52.5509159403384,0,0,646.62299578369,889.282416577961,0,0.096670718292122,0,0,0.551346289938122,0,0,1.44885266607372,0,621.140711926556,523.141363367819,368.162675546875,673.710820497962,0,0.31481234683064,0,0,0,0,0,0.286249773483982,0,1.2655176988749,0.38126038784765,0,0,0,0,0,0,0.471249609382746,0,0,0.421258456238981,0,0,0,0,0,1.13008116620243,0,0,0,1.73632660280006,0,0.202910376962704,9.60452844109225,0,0.143411352204052,0,0.35667105148125,0,0.844430541190656,0,0,0,602.735314112608,866.030539992237,588.011318251142,51.9673780287821,1184.32028021855,1849.81680283053,1555.10954845312,768.195050292072,0.507447609232169,0,0,0,0,0,0,0,0,0,784.373731355283,0,0,0,0,0,0,2.75175657541048,0,10.389495590198,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,185.456275544546,0.439524537815682,0,0,0,1372.06455378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| |||
|short_description=p1@TACSTD2 | |||
}} |
Latest revision as of 17:01, 18 September 2015
Short description: | p1@TACSTD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TACSTD2_5end |
Coexpression cluster: | C1844_squamous_epidermoid_bronchioalveolar_Corneal_Alveolar_Esophageal_Urothelial |
Association with transcript: | 234bp_to_ENST00000371225, NM_002353, uc001cyz.3_5end |
EntrezGene: | TACSTD2 |
HGNC: | 11530 |
UniProt: | P09758 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.28e-30 | 253 |
endo-epithelial cell | 7.90e-18 | 42 |
endodermal cell | 2.59e-11 | 58 |
epithelial cell of nephron | 2.00e-09 | 15 |
respiratory epithelial cell | 4.55e-09 | 13 |
epithelial cell of alimentary canal | 5.58e-08 | 20 |
kidney cortical cell | 7.75e-08 | 12 |
renal cortical epithelial cell | 7.75e-08 | 12 |
kidney cell | 1.14e-07 | 17 |
kidney epithelial cell | 1.14e-07 | 17 |
squamous epithelial cell | 5.29e-07 | 63 |
kidney tubule cell | 9.20e-07 | 10 |
nephron tubule epithelial cell | 9.20e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.52e-10 | 14 |
carcinoma | 1.06e-09 | 106 |