FFCP PHASE1:Hg19::chr1:207262215..207262226,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=725 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1328 | |||
|TSSclassifier=strong | |||
|UniProt=P20851 | |||
|association_with_transcript=3bp_to_NM_001017365,NM_001017366,uc001hfi.2,uc001hfj.2_5end | |||
|cluster_id=chr1:207262215..207262226,+ | |||
|coexpression_cluster_id=C106 | |||
|description=CAGE_peak_4_at_C4BPB_5end | |||
|id=chr1:207262215..207262226,+ | |||
|ontology_enrichment_celltype=CL:0000077!1.42e-15!19;CL:0000066!2.42e-12!254;CL:0000181!2.39e-10!12;CL:0000417!2.39e-10!12;CL:0000668!2.39e-10!12;CL:0000414!2.39e-10!12;CL:0000412!2.39e-10!12;CL:0000182!2.39e-10!12;CL:0002150!8.64e-10!3;CL:0000861!8.64e-10!3;CL:0000174!5.96e-09!3 | |||
|ontology_enrichment_celltype_v019=CL:0000077;1.09e-10;19!CL:0002581;2.46e-09;1!CL:0000182;9.06e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,3.42e-11,253;CL:0000077,1.13e-10,19;CL:0002581,2.46e-09,1;CL:0000182,9.15e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.01e-22;29 | |||
|ontology_enrichment_disease=DOID:305!1.35e-15!106;DOID:162!1.97e-11!235;DOID:14566!5.70e-11!239;DOID:0050687!2.06e-10!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.48e-13,106;DOID:162,1.40e-09,235;DOID:14566,2.60e-09,239;DOID:0050687,3.94e-09,143 | |||
|ontology_enrichment_uberon=UBERON:0001737!8.41e-27!9;UBERON:0001557!5.06e-14!19;UBERON:0000077!3.40e-12!130;UBERON:0001041!3.06e-11!98;UBERON:0004921!3.41e-11!129;UBERON:0004185!3.41e-11!129;UBERON:0007499!6.32e-11!25;UBERON:0009497!7.11e-11!25;UBERON:0000015!7.11e-11!25;UBERON:0002423!7.11e-11!25;UBERON:0006235!7.11e-11!25;UBERON:0004161!7.11e-11!25;UBERON:0004119!1.35e-10!169;UBERON:0000925!1.35e-10!169;UBERON:0006595!1.35e-10!169;UBERON:0008835!1.91e-10!22;UBERON:0003894!1.91e-10!22;UBERON:0009856!2.06e-10!26;UBERON:0008947!5.29e-10!38;UBERON:0003258!5.29e-10!38;UBERON:0009854!6.69e-10!23;UBERON:0003124!3.89e-09!7;UBERON:0001007!7.05e-09!155;UBERON:0001555!7.05e-09!155;UBERON:0007026!7.05e-09!155;UBERON:0002107!5.81e-08!19;UBERON:0006925!5.81e-08!19;UBERON:0008836!5.81e-08!19;UBERON:0000072!9.84e-08!46;UBERON:0000065!2.39e-07!53;UBERON:0005406!9.36e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;6.42e-76;9!UBERON:0001557;6.42e-76;9!UBERON:0000072;1.77e-16;37!UBERON:0000065;6.79e-14;44!UBERON:0001004;2.25e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,6.42e-76,9;UBERON:0001557,2.40e-35,19;UBERON:0008947,4.94e-17,38;UBERON:0003258,4.94e-17,38;UBERON:0001041,3.33e-14,87;UBERON:0000072,1.62e-13,47;UBERON:0000065,1.37e-11,54;UBERON:0004921,8.98e-10,118;UBERON:0001004,4.29e-08,74;UBERON:0001007,1.52e-07,145;UBERON:0001555,1.52e-07,145;UBERON:0007026,1.52e-07,145 | |||
|phase1_expression=0,0,0,0,0,0.872338524100369,0,0,0,0.737201809504527,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.252894008168,24.1076106811685,23.6190809285812,25.3676137284506,21.3521855210558,26.3370387213317,25.4831172422711,31.5916558851807,28.0865424570865,0,0,0,0,7.60530208930985,4.91413608338813,5.31710916013264,0,0.614942192715568,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.907170879989041,0.248107807818777,0.460385919864187,0,0.256278298511402,0,0.321707842287215,1.48418066444991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,1.97710372524119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.37709236908869,0,0,0,0,0,0,0.638002319463839,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.265372693510018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0.17472666824203,0,5.80537987734511,6.87039580610144,5.58385107961823,0,0,0,0,0,0,0,0.400794101257669,0,0,0,0,0,0,0,0,0.135904206073614,0.209205692624666,0,0,0,0,0,0.859530882839914,0,0,0,0,0,0,0,0.0671834724867263,0,0,0.315132729228895,0.494495150286999,0.202210631562555,0.0984274815147488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0.58620893471233,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0.192619830407303,4.28883182749851,0.260994291965212,6.34776591434363,0,5.38420749914229,2.68633261622231,0,4.38568099157414,0,0.771656153083659,0.168942440653073,0,0.690860683462397,0.911579868532147,0,0,0,0,0,0.983091635014877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0.840816489941367,0,0.215927591218621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0.154348316215889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0.426909383510862,0,0.449126010532934,0,0,0,0,0,0 | |||
|short_description=p4@C4BPB | |||
}} |
Latest revision as of 07:09, 20 September 2015
Short description: | p4@C4BPB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_C4BPB_5end |
Coexpression cluster: | C106_Hep2_epitheloid_placenta_cervical_rectal_anaplastic_glassy |
Association with transcript: | 3bp_to_NM_001017365, NM_001017366, uc001hfi.2, uc001hfj.2_5end |
EntrezGene: | C4BPB |
HGNC: | 1328 |
UniProt: | P20851 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 3.42e-11 | 253 |
mesothelial cell | 1.13e-10 | 19 |
perirenal preadipocyte | 2.46e-09 | 1 |
hepatocyte | 9.15e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
larynx | 6.42e-76 | 9 |
upper respiratory tract | 2.40e-35 | 19 |
respiratory primordium | 4.94e-17 | 38 |
endoderm of foregut | 4.94e-17 | 38 |
foregut | 3.33e-14 | 87 |
segment of respiratory tract | 1.62e-13 | 47 |
respiratory tract | 1.37e-11 | 54 |
subdivision of digestive tract | 8.98e-10 | 118 |
respiratory system | 4.29e-08 | 74 |
digestive system | 1.52e-07 | 145 |
digestive tract | 1.52e-07 | 145 |
primitive gut | 1.52e-07 | 145 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.48e-13 | 106 |
cancer | 1.40e-09 | 235 |
disease of cellular proliferation | 2.60e-09 | 239 |
cell type cancer | 3.94e-09 | 143 |