FFCP PHASE1:Hg19::chr1:156460402..156460417,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4209 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6997 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-11bp_to_ENST00000360595,uc001fpb.2_5end | |||
|cluster_id=chr1:156460402..156460417,- | |||
|coexpression_cluster_id=C132 | |||
|description=CAGE_peak_22_at_MEF2D_5end | |||
|id=chr1:156460402..156460417,- | |||
|ontology_enrichment_celltype=CL:0000945!1.64e-12!24;CL:0000826!1.64e-12!24;CL:0000817!7.98e-11!3;CL:0000785!1.27e-07!2;CL:0000955!1.27e-07!2;CL:0000818!1.27e-07!2;CL:0000954!1.27e-07!2;CL:0000816!1.27e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000945;4.63e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,4.41e-08,24;CL:0000826,4.41e-08,24 | |||
|ontology_enrichment_development_v019=UBERON:0003056;7.02e-08;3 | |||
|ontology_enrichment_disease=DOID:2531!1.65e-13!51;DOID:0060083!1.65e-13!51;DOID:1240!2.51e-10!39;DOID:8692!1.98e-09!31;DOID:74!8.43e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.29e-10;31!DOID:1240;2.42e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.09e-10,31;DOID:1240,1.46e-08,39 | |||
|ontology_enrichment_uberon=UBERON:0001630!2.17e-08!2;UBERON:0005090!2.17e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001389;5.71e-21;1!UBERON:0000026;5.71e-21;1!UBERON:0008784;5.71e-21;1!UBERON:0006058;5.71e-21;1!UBERON:0003663;5.71e-21;1!UBERON:0004256;5.71e-21;1!UBERON:0004708;5.71e-21;1!UBERON:0002101;5.71e-21;1!UBERON:0004709;5.71e-21;1!UBERON:0002529;5.71e-21;1!UBERON:0010538;5.71e-21;1!UBERON:0003661;5.71e-21;1!UBERON:0010890;5.71e-21;1!UBERON:0002471;5.71e-21;1!UBERON:0001383;5.71e-21;1!UBERON:0010758;5.71e-21;1!UBERON:0010707;5.71e-21;1!UBERON:0000978;5.71e-21;1!UBERON:0002103;5.71e-21;1!UBERON:0001665;5.71e-21;1!UBERON:0003823;5.71e-21;1!UBERON:0000154;5.71e-21;1!UBERON:0010709;5.71e-21;1!UBERON:0005090;3.52e-11;2!UBERON:0001630;3.52e-11;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005418,3.45e-21,1;UBERON:0001389,3.45e-21,1;UBERON:0000026,3.45e-21,1;UBERON:0008784,3.45e-21,1;UBERON:0006058,3.45e-21,1;UBERON:0003663,3.45e-21,1;UBERON:0004256,3.45e-21,1;UBERON:0004708,3.45e-21,1;UBERON:0002101,3.45e-21,1;UBERON:0004709,3.45e-21,1;UBERON:0002529,3.45e-21,1;UBERON:0010538,3.45e-21,1;UBERON:0003661,3.45e-21,1;UBERON:0010890,3.45e-21,1;UBERON:0002471,3.45e-21,1;UBERON:0001383,3.45e-21,1;UBERON:0004357,3.45e-21,1;UBERON:0004347,3.45e-21,1;UBERON:0005420,3.45e-21,1;UBERON:0005732,3.45e-21,1;UBERON:0010758,3.45e-21,1;UBERON:0010707,3.45e-21,1;UBERON:0000978,3.45e-21,1;UBERON:0002103,3.45e-21,1;UBERON:0001665,3.45e-21,1;UBERON:0003823,3.45e-21,1;UBERON:0000154,3.45e-21,1;UBERON:0010709,3.45e-21,1;UBERON:0005733,3.45e-21,1;UBERON:0005730,3.45e-21,1;UBERON:0005090,2.73e-11,2;UBERON:0001630,2.73e-11,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60468152070698,1.80621296789881,2.99100968991981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0.0974370051611986,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126995788584338,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165018999841176,0,0,0,0.096670718292122,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0.185803175125719,0.432807638929335,0,0,0,0,0,0,0,0.228234679033192,0,0,0,0.963528450622197,1.00899853595524,0.425846237690326,0,4.60861146462687,4.2498460499559,5.50602167649298,0.586164286206121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0.369254416383208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0969890164884194,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423366660328922,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714695326373367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0,0,0.395223263795889,0.121792598380896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213383459388282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157723490002507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0.230467975111559,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,1.42212250559454,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94228651156368,0.821302454849976,1.1598144313382,0.485710993059139,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.499705779624645,0,0,0,0,0.917458566809082,0,0,0,0,0,0,0,0,0.378499274505237,0.109265571963696,0.380095503034311,0.101988829741982,0,0,0,0,0,0,0,0.426467963801962,0,0,0.0620747142958579,0,0,0,0.217716747896961,0,0.202056159043763,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0.320568492303233 | |||
|short_description=p22@MEF2D | |||
}} |
Latest revision as of 16:04, 17 September 2015
Short description: | p22@MEF2D |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_22_at_MEF2D_5end |
Coexpression cluster: | C132_acute_small_Dendritic_Macrophage_CD14_Neutrophils_Monocytederived |
Association with transcript: | -11bp_to_ENST00000360595, uc001fpb.2_5end |
EntrezGene: | MEF2D |
HGNC: | 6997 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 4.41e-08 | 24 |
pro-B cell | 4.41e-08 | 24 |
Ontology term | p-value | n |
---|---|---|
hindlimb bud | 3.45e-21 | 1 |
soleus muscle | 3.45e-21 | 1 |
appendage | 3.45e-21 | 1 |
lower limb segment | 3.45e-21 | 1 |
multi-limb segment region | 3.45e-21 | 1 |
hindlimb muscle | 3.45e-21 | 1 |
hindlimb zeugopod muscle | 3.45e-21 | 1 |
paired limb/fin | 3.45e-21 | 1 |
limb | 3.45e-21 | 1 |
pelvic appendage | 3.45e-21 | 1 |
limb segment | 3.45e-21 | 1 |
paired limb/fin segment | 3.45e-21 | 1 |
limb muscle | 3.45e-21 | 1 |
pelvic complex muscle | 3.45e-21 | 1 |
zeugopod | 3.45e-21 | 1 |
muscle of leg | 3.45e-21 | 1 |
paired limb/fin bud | 3.45e-21 | 1 |
limb bud | 3.45e-21 | 1 |
pelvic appendage bud | 3.45e-21 | 1 |
limb/fin field | 3.45e-21 | 1 |
subdivision of organism along appendicular axis | 3.45e-21 | 1 |
appendage girdle complex | 3.45e-21 | 1 |
leg | 3.45e-21 | 1 |
hindlimb | 3.45e-21 | 1 |
triceps surae | 3.45e-21 | 1 |
hindlimb zeugopod | 3.45e-21 | 1 |
posterior region of body | 3.45e-21 | 1 |
pelvic complex | 3.45e-21 | 1 |
limb field | 3.45e-21 | 1 |
hindlimb/pelvic fin field | 3.45e-21 | 1 |
muscle structure | 2.73e-11 | 2 |
muscle organ | 2.73e-11 | 2 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.09e-10 | 31 |
leukemia | 1.46e-08 | 39 |