FFCP PHASE1:Hg19::chr1:116311296..116311307,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=845 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1513 | |||
|TSSclassifier=strong | |||
|UniProt=B4DIB0 | |||
|association_with_transcript=27bp_to_ENST00000456138_5end | |||
|cluster_id=chr1:116311296..116311307,- | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_4_at_CASQ2_5end | |||
|id=chr1:116311296..116311307,- | |||
|ontology_enrichment_celltype=CL:0000188!2.46e-09!9 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005062;5.98e-15;4!UBERON:0007284;5.98e-15;4!UBERON:0006603;5.55e-11;65!UBERON:0003104;9.40e-09;31!UBERON:0010226;4.28e-08;1!UBERON:0010227;4.89e-08;1!UBERON:0004140;7.03e-08;1!UBERON:0000358;1.07e-07;1!UBERON:0009143;2.62e-07;1!UBERON:0006242;2.62e-07;1!UBERON:0004874;2.62e-07;1 | |||
|ontology_enrichment_disease=DOID:114!7.61e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:114;3.74e-14;2!DOID:178;8.84e-08;1!DOID:326;8.84e-08;1!DOID:3978;8.84e-08;1!DOID:3394;8.84e-08;1!DOID:5844;8.84e-08;1!DOID:1287;1.69e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,3.74e-14,2;DOID:178,8.84e-08,1;DOID:326,8.84e-08,1;DOID:3978,8.84e-08,1;DOID:3394,8.84e-08,1;DOID:5844,8.84e-08,1;DOID:1287,1.69e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!4.42e-52!115;UBERON:0004151!2.17e-09!3;UBERON:0003978!3.24e-09!3;UBERON:0009751!3.24e-09!3;UBERON:0000946!3.24e-09!3;UBERON:0002523!3.24e-09!3;UBERON:0005983!3.24e-09!3;UBERON:0002165!3.24e-09!3;UBERON:0002062!3.24e-09!3;UBERON:0007280!3.24e-09!3;UBERON:0003103!4.56e-08!69;UBERON:0007100!6.57e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0004151;3.58e-20;3!UBERON:0003978;9.67e-20;3!UBERON:0000946;9.67e-20;3!UBERON:0007100;1.27e-19;25!UBERON:0002081;8.11e-14;2!UBERON:0000341;9.52e-14;2!UBERON:0005090;9.52e-14;2!UBERON:0001630;9.52e-14;2!UBERON:0002133;1.64e-13;2!UBERON:0000948;4.01e-10;22!UBERON:0001134;6.94e-10;16!UBERON:0002036;6.94e-10;16!UBERON:0001723;1.49e-09;3!UBERON:0001033;1.49e-09;3!UBERON:0002084;4.28e-08;1!UBERON:0002082;4.28e-08;1!UBERON:0002079;4.89e-08;1!UBERON:0002146;5.77e-08;1!UBERON:0002426;5.77e-08;1!UBERON:0003831;5.77e-08;1!UBERON:0003898;5.77e-08;1!UBERON:0004830;5.77e-08;1!UBERON:0005623;5.77e-08;1!UBERON:0003830;5.77e-08;1!UBERON:0005175;5.77e-08;1!UBERON:0001774;5.77e-08;1!UBERON:0001103;5.77e-08;1!UBERON:0002135;1.01e-07;1!UBERON:0007029;1.15e-07;1!UBERON:0002134;1.80e-07;1!UBERON:0001389;1.80e-07;1!UBERON:0000026;1.80e-07;1!UBERON:0008784;1.80e-07;1!UBERON:0006058;1.80e-07;1!UBERON:0003663;1.80e-07;1!UBERON:0004256;1.80e-07;1!UBERON:0004708;1.80e-07;1!UBERON:0002101;1.80e-07;1!UBERON:0004709;1.80e-07;1!UBERON:0005208;1.80e-07;1!UBERON:0002529;1.80e-07;1!UBERON:0010538;1.80e-07;1!UBERON:0003661;1.80e-07;1!UBERON:0010890;1.80e-07;1!UBERON:0002471;1.80e-07;1!UBERON:0001383;1.80e-07;1!UBERON:0004145;1.80e-07;1!UBERON:0005946;1.80e-07;1!UBERON:0010758;1.80e-07;1!UBERON:0010707;1.80e-07;1!UBERON:0000978;1.80e-07;1!UBERON:0002103;1.80e-07;1!UBERON:0001665;1.80e-07;1!UBERON:0003823;1.80e-07;1!UBERON:0000154;1.80e-07;1!UBERON:0010709;1.80e-07;1!UBERON:0005965;1.80e-07;1!UBERON:0002078;1.80e-07;1!UBERON:0000989;2.62e-07;1!UBERON:0008811;2.62e-07;1!UBERON:0002385;6.26e-07;31!UBERON:0001015;6.26e-07;31!UBERON:0000383;6.26e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,3.36e-20,3;UBERON:0003978,8.79e-20,3;UBERON:0009751,8.79e-20,3;UBERON:0000946,8.79e-20,3;UBERON:0002523,8.79e-20,3;UBERON:0005983,8.79e-20,3;UBERON:0002165,8.79e-20,3;UBERON:0002062,8.79e-20,3;UBERON:0007280,8.79e-20,3;UBERON:0007100,4.50e-18,27;UBERON:0007023,6.95e-16,114;UBERON:0002081,7.61e-14,2;UBERON:0010227,7.61e-14,2;UBERON:0000341,9.83e-14,2;UBERON:0005090,1.05e-13,2;UBERON:0001630,1.05e-13,2;UBERON:0002133,1.54e-13,2;UBERON:0003103,2.19e-13,68;UBERON:0001723,1.53e-09,3;UBERON:0001033,1.53e-09,3;UBERON:0010056,1.53e-09,3;UBERON:0000948,3.03e-09,24;UBERON:0005498,3.03e-09,24;UBERON:0004140,3.03e-09,24;UBERON:0009881,3.03e-09,24;UBERON:0004141,3.03e-09,24;UBERON:0003084,3.03e-09,24;UBERON:0007005,3.03e-09,24;UBERON:0004139,3.03e-09,24;UBERON:0004291,3.03e-09,24;UBERON:0004797,9.00e-09,7;UBERON:0002084,4.28e-08,1;UBERON:0002082,4.28e-08,1;UBERON:0010226,4.28e-08,1;UBERON:0002079,4.89e-08,1;UBERON:0002146,5.58e-08,1;UBERON:0005623,5.58e-08,1;UBERON:0002426,5.96e-08,1;UBERON:0003831,5.96e-08,1;UBERON:0003898,5.96e-08,1;UBERON:0004830,5.96e-08,1;UBERON:0003830,5.96e-08,1;UBERON:0005175,5.96e-08,1;UBERON:0001774,5.96e-08,1;UBERON:0001103,5.96e-08,1;UBERON:0010084,5.96e-08,1;UBERON:0002135,1.01e-07,1;UBERON:0007029,1.15e-07,1;UBERON:0002134,1.69e-07,1;UBERON:0005208,1.69e-07,1;UBERON:0005946,1.69e-07,1;UBERON:0005965,1.69e-07,1;UBERON:0002078,1.69e-07,1;UBERON:0005418,1.91e-07,1;UBERON:0001389,1.91e-07,1;UBERON:0000026,1.91e-07,1;UBERON:0008784,1.91e-07,1;UBERON:0006058,1.91e-07,1;UBERON:0003663,1.91e-07,1;UBERON:0004256,1.91e-07,1;UBERON:0004708,1.91e-07,1;UBERON:0002101,1.91e-07,1;UBERON:0004709,1.91e-07,1;UBERON:0002529,1.91e-07,1;UBERON:0010538,1.91e-07,1;UBERON:0003661,1.91e-07,1;UBERON:0010890,1.91e-07,1;UBERON:0002471,1.91e-07,1;UBERON:0001383,1.91e-07,1;UBERON:0004357,1.91e-07,1;UBERON:0004347,1.91e-07,1;UBERON:0005420,1.91e-07,1;UBERON:0005732,1.91e-07,1;UBERON:0010758,1.91e-07,1;UBERON:0010707,1.91e-07,1;UBERON:0000978,1.91e-07,1;UBERON:0002103,1.91e-07,1;UBERON:0001665,1.91e-07,1;UBERON:0003823,1.91e-07,1;UBERON:0000154,1.91e-07,1;UBERON:0010709,1.91e-07,1;UBERON:0005733,1.91e-07,1;UBERON:0005730,1.91e-07,1;UBERON:0000989,2.17e-07,1;UBERON:0008811,2.17e-07,1;UBERON:0006258,2.17e-07,1;UBERON:0005876,2.17e-07,1;UBERON:0004874,2.17e-07,1 | |||
|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.723906533337896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.096670718292122,0,0.307007349452259,0.551346289938122,0,0.290033387828457,0.767039646744908,11.2180364914889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.46508179271894,0,0,0,0,0,0,0,0,0,0,0,0.996239941255349,0,0,0,0,0,0,0,0,1.87422470710174,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0,0.692552326534174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.530745387020035,0.611030144933625,0,0,0,0.269604531922708,23.2747517716649,0,0,0,0,0,0,0,0.947798694427319,0,0,0,0,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,1.26085721434945,0,3.84167259326905,0,0,0,0,0,1.06726497369676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.49560164325664,23.3743632491917,2.87149209830726,12.7794560319354,36.4842140916085,17.1842022230242,17.5348863190356,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0,0,0,0,35.7347663186683,39.7255182219259,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.320362237703084,0,0,0,0,0,0,0,5.2644877744767,0.919036730290385,2.29510841496863,0,0,0,0.1251909307065,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0.754703705257725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.601682626794058,0,0.781514011233092,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,1.98484471355718,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0.941917114206168,0,0,0,0,0,0.714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58971534875158,13.8594789255933,18.5570309014112,6.31424290976881,0,0,0,0,0,0,0.231522474323834,0,0,2.69663153929296,0,0,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0.730336388246517,0.458729283404541,0.143339583151451,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303114792872958,0.267964130156178,0,0.103432995861895,4.26467963801962,13.0935437305057,0,0,0,0.572824424503484,1.41482032270754,3.04803447055746,30.8009970976753,0.134704106029175,0.573777643141411,2.99394320891412,0,0,0,0,7.03922827210363,0.122241444182866,0.406896178315738,0,1.00636896795513,0 | |||
|short_description=p4@CASQ2 | |||
}} |
Latest revision as of 08:07, 16 September 2015
Short description: | p4@CASQ2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CASQ2_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 27bp_to_ENST00000456138_5end |
EntrezGene: | CASQ2 |
HGNC: | 1513 |
UniProt: | B4DIB0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
heart disease | 3.74e-14 | 2 |
vascular disease | 8.84e-08 | 1 |
ischemia | 8.84e-08 | 1 |
extrinsic cardiomyopathy | 8.84e-08 | 1 |
myocardial ischemia | 8.84e-08 | 1 |
myocardial infarction | 8.84e-08 | 1 |
cardiovascular system disease | 1.69e-07 | 4 |