FFCP PHASE1:Hg19::chr19:36592982..36592993,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:36592982..36592993,+ | |||
|coexpression_cluster_id=C360 | |||
|description=CAGE_peak_at_chr19:36592982..36592993,+ | |||
|id=chr19:36592982..36592993,+ | |||
|ontology_enrichment_celltype=CL:0000349!7.14e-28!3;CL:0002577!7.14e-28!3;CL:0002536!5.88e-19!2;CL:0002537!1.24e-16!5;CL:0002541!9.38e-13!3 | |||
|ontology_enrichment_celltype_v019=CL:0000349;7.02e-103;19!CL:0002577;1.33e-60;3!CL:0002536;1.64e-40;2!CL:0002537;5.92e-36;5!CL:0002541;6.06e-27;3!CL:0000134;1.55e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,7.02e-103,19;CL:0002577,1.33e-60,3;CL:0002536,1.64e-40,2;CL:0002537,5.92e-36,5;CL:0002541,6.06e-27,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.02e-74!14;UBERON:0000158!1.02e-74!14;UBERON:0003124!4.33e-45!7;UBERON:0000478!6.43e-43!24;UBERON:0001987!8.21e-36!4;UBERON:0004340!8.21e-36!4;UBERON:0000305!9.76e-32!7;UBERON:0004871!9.05e-28!8;UBERON:0004923!2.61e-20!57;UBERON:0000476!9.38e-13!3;UBERON:0000920!9.38e-13!3;UBERON:0000995!2.22e-10!21;UBERON:0005795!6.69e-10!22;UBERON:0003975!6.69e-10!22;UBERON:0002372!1.07e-09!1;UBERON:0001961!1.07e-09!1;UBERON:0001744!1.07e-09!1;UBERON:0001735!1.07e-09!1;UBERON:0004175!1.08e-08!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;2.47e-95;10!UBERON:0000158;2.47e-95;10!UBERON:0000478;1.89e-81;24!UBERON:0000305;3.93e-70;7!UBERON:0001987;1.07e-45;4!UBERON:0003124;6.06e-27;3!UBERON:0000920;6.06e-27;3!UBERON:0004923;2.24e-12;55!UBERON:0000077;2.38e-07;27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.35e-139,14;UBERON:0000158,1.35e-139,14;UBERON:0000478,1.89e-81,24;UBERON:0003124,1.44e-70,7;UBERON:0000305,3.93e-70,7;UBERON:0004871,1.99e-61,8;UBERON:0001987,1.07e-45,4;UBERON:0004340,1.07e-45,4;UBERON:0004923,1.59e-29,66;UBERON:0000920,6.06e-27,3;UBERON:0000995,2.75e-09,21;UBERON:0005795,6.84e-09,22;UBERON:0003975,6.84e-09,22;UBERON:0004175,6.81e-08,25;UBERON:0000077,7.03e-07,29 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,6.99012390816551,10.8144461073666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.973269740605272,0,0,0,0.0654895377488563,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,28.7971192873946,19.9722527412596,28.1222972796603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.87856799634377,2.37571744666111,4.30024982938925,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,0,0,0,0,0,3.82801391678303,0,1.5991043280559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212574920101683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0,0,0,0,0,0.217716747896961,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:36592982..36592993,+ | |||
}} |
Latest revision as of 07:00, 26 July 2015
Short description: | p@chr19:36592982..36592993, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:36592982..36592993, + |
Coexpression cluster: | C360_Placental_Amniotic_amniotic_teratocarcinoma_chorionic_neuroblastoma_H9 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 7.02e-103 | 19 |
placental epithelial cell | 1.33e-60 | 3 |
amniotic epithelial cell | 1.64e-40 | 2 |
amnion mesenchymal stem cell | 5.92e-36 | 5 |
chorionic membrane mesenchymal stem cell | 6.06e-27 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.35e-139 | 14 |
membranous layer | 1.35e-139 | 14 |
extraembryonic structure | 1.89e-81 | 24 |
chorion | 1.44e-70 | 7 |
amnion | 3.93e-70 | 7 |
somatic layer of lateral plate mesoderm | 1.99e-61 | 8 |
placenta | 1.07e-45 | 4 |
allantois | 1.07e-45 | 4 |
organ component layer | 1.59e-29 | 66 |
egg chorion | 6.06e-27 | 3 |
uterus | 2.75e-09 | 21 |
embryonic uterus | 6.84e-09 | 22 |
internal female genitalia | 6.84e-09 | 22 |
internal genitalia | 6.81e-08 | 25 |
mixed endoderm/mesoderm-derived structure | 7.03e-07 | 29 |