FFCP PHASE1:Hg19::chr19:17516866..17516899,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=93343 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=25153 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-18bp_to_ENST00000529490_5end | |||
|cluster_id=chr19:17516866..17516899,+ | |||
|description=CAGE_peak_6_at_FAM125A_5end | |||
|id=chr19:17516866..17516899,+ | |||
|ontology_enrichment_celltype=CL:0002087!1.86e-30!119;CL:0000738!2.36e-27!140;CL:0002031!1.42e-26!124;CL:0000037!1.34e-25!172;CL:0000566!1.34e-25!172;CL:0000988!2.44e-25!182;CL:0002032!1.36e-23!165;CL:0000837!1.36e-23!165;CL:0000860!3.26e-19!45;CL:0002194!1.23e-17!63;CL:0000576!1.23e-17!63;CL:0000040!1.23e-17!63;CL:0000559!1.23e-17!63;CL:0002009!2.63e-17!65;CL:0002057!7.33e-17!42;CL:0000557!9.00e-16!71;CL:0000839!1.51e-15!70;CL:0000766!1.44e-14!76;CL:0000763!3.86e-12!112;CL:0000049!3.86e-12!112;CL:0000542!8.20e-12!53;CL:0000051!8.20e-12!53;CL:0000838!2.69e-11!52 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.54e-13;33!CL:0002057;3.54e-13;33!CL:0000473;3.39e-09;39!CL:0000234;3.39e-09;39!CL:0000945;2.31e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,1.14e-11,115;CL:0000860,3.00e-10,42;CL:0002057,3.00e-10,42;CL:0002031,4.93e-10,120;CL:0000738,2.68e-09,136;CL:0000473,2.09e-08,48;CL:0000234,2.09e-08,48;CL:0000945,2.38e-08,24;CL:0000826,2.38e-08,24;CL:0000542,2.08e-07,53;CL:0000051,2.08e-07,53;CL:0000988,3.27e-07,177;CL:0002032,4.99e-07,161;CL:0000837,4.99e-07,161;CL:0000037,5.21e-07,168;CL:0000838,9.87e-07,52 | |||
|ontology_enrichment_development_v019=UBERON:0008947;8.94e-08;29!CL:0002057;1.21e-07;42 | |||
|ontology_enrichment_disease=DOID:0060058!4.41e-08!10;DOID:162!9.00e-08!235;DOID:2531!9.17e-08!51;DOID:0060083!9.17e-08!51;DOID:14566!4.27e-07!239 | |||
|ontology_enrichment_disease_v019=DOID:0060058;3.52e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:162,5.79e-11,235;DOID:14566,1.89e-10,239;DOID:305,2.10e-10,106;DOID:0060058,2.57e-09,10;DOID:0050687,5.76e-09,143 | |||
|ontology_enrichment_uberon=UBERON:0002390!1.90e-18!102;UBERON:0003061!1.90e-18!102;UBERON:0002193!1.77e-15!112;UBERON:0002405!2.43e-14!115;UBERON:0002371!5.33e-13!80;UBERON:0001474!1.58e-11!86;UBERON:0001737!1.53e-09!9;UBERON:0001557!9.25e-08!19;UBERON:0004765!1.75e-07!101;UBERON:0001434!1.75e-07!101 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;7.96e-19;9!UBERON:0001557;7.96e-19;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,5.02e-19,9;UBERON:0001557,1.13e-15,19;UBERON:0001041,1.38e-07,87;UBERON:0002370,2.59e-07,4;UBERON:0005058,2.59e-07,4;UBERON:0009113,2.59e-07,4;UBERON:0003295,2.59e-07,4;UBERON:0005562,2.59e-07,4;UBERON:0000072,4.95e-07,47;UBERON:0002390,9.90e-07,98;UBERON:0003061,9.90e-07,98 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52164238968239,2.29881650459848,2.36132343941038,0,0.767658796194425,0.464448369948228,0,0,0,8.13405606093167,4.83375390457233,0,0,0.200544447470142,0.651032612147555,0.671746422719773,0.32389366601898,0,0,0.377875943688809,0.727752183563449,0.232429036905685,0.411167888021826,0.309706370895104,2.8769239232215,4.86705342405291,2.60130452877444,0,0.645484683583826,1.35426486594342,0.188242339542605,0.272906150057846,0.224723484445085,2.44867113896722,0.641858054152187,2.55734850319616,4.28806690242731,4.3882004676759,4.26224750532694,2.32167390902867,1.13477044938228,1.24564449799115,3.01498398308092,2.60741459210101,3.47502151528187,1.21079900526674,0.736555271975129,3.16462387440884,0.422510572623884,0.425208599930087,0.419317291016752,0.336985893439485,0.150176892841506,1.12507910687956,0,0.39783335439818,0.182664153764634,0,0.546138611262131,0,0,0,0.574752439954483,0,0,0,0.587237189370939,0,1.32171328579026,0.560508562981536,0,0.196709770113833,0.393010762749165,0.616804496998528,0.83593247695339,0.651844533267181,0,0,1.89397776704795,0.589211814949674,0.221533894583621,0.812411591295047,0.768547918354051,0.910415432919148,0.493313713811028,0.552700035571697,0,0.14828656316206,0.267540828089713,0,1.13309342697566,1.14966148080576,0.34362744548263,1.01207876807801,0.318565414324097,0.651083453856419,0,0,0.255973222308837,0,0.236777252044017,0,1.00803371612366,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0.348259474598534,0.664789802594326,0.715471872916026,8.57992366170192,0.371457501329565,0,0,0,0,0,0,0.417989933073621,0,0,0,0,0,0,0,0.81014194788176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70763188581434,1.98794652482228,2.44007280025989,0.621966330092223,2.27088765788066,0.72995471815166,0,0,1.38134921352481,0,0,5.79703320195235,4.88895601226495,6.02527574708705,5.4044046638873,5.01122721412534,4.27087114399974,4.98875840192608,4.90553662813365,2.69323009862473,0,1.40241773803446,0,0,3.80265104465493,0,4.72631925345123,0.441463099414651,0.737930631258681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0.264145302039678,0,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0.502257091432126,0,0,0,0,0.144781306667579,0,0,2.01753259188349,0.394061520403854,0.215627574859517,0.641715181398742,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0.533637789017222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0.541892875087706,0,0,0,0,0,0,0,0,0,3.40035338437484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0.143124886741991,0,0.316379424718726,0,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,0,0,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.0481834334015,1.29151611801369,1.68471475667626,0.886860307073351,0.459446800413919,0.507447609232169,0.764637207142375,0,0.238231775457789,0,0,1.62009431171434,0,0.106824071127473,0,0,1.30062222588003,0.144269212976445,0.355709216742071,0,0.997896857164083,0,0,0.324621940274555,0.561594356226918,2.28234679033192,0,0,0.677167111206413,0.321176150207399,0,0,0.343505344755765,0.307240764308458,0,0.166849141711909,0,0,0,0.270455678475983,0,0,2.99424864653152,0.146508179271894,0,1.67165076416218,0.284136146806413,0,0,0,0,0,1.11308705022906,1.97764649072111,0,0.19924798825107,0.552567831062295,0,0.20453736500431,4.30796819113743,0,0.179736702294654,0.179021174675609,0,0.197286811273867,0,0,0,0,0,0,0.174919999992391,0,0.1137934482855,0,1.18193840883968,0,0,0,0,0,0,0,0,0,28.3240005149374,0.41827123283581,0,0,0,3.32103284316157,0.325942115766024,3.82801391678303,0.0915975934018623,2.66517388009317,2.04386596391473,0,0,0.676786981851542,0.588187602953219,0.167821586975843,0.37950746544837,0.158936578980379,0,0,0,0,0,0.0884575645033392,0,1.18608451472249,0.988511511572023,1.14864144456001,0,0,0,0.364909578431332,0,0.242780379534093,0.394584402849391,0,0,0.252746318513952,0.450970258243478,0,0,0,0.627865836814451,0,1.13843818411917,0,0,0.685946781900644,0,0.17472666824203,1.71986032471617,6.19240520250145,3.80064448848165,3.85942648150083,0.193978032976839,0,0,0,0,0.0633107959558787,10.950877433149,0,0.426905989478705,0.999048047910651,0.72045208577053,1.4889757501569,0,0,1.61528296235062,0,0,0,0,0,0,0,0,0,0.525774708558629,0.558564802544508,0,0,0,0.429226048136571,0,0,0.360299883542404,0,4.25429184459008,2.30764403467266,3.63979136812598,0.0984274815147488,2.45552662990775,0,0.408610218334727,0,0,0,0.2249738915515,0,0.182248669974074,0.335434687599266,0,0.577000469484979,3.06240975906279,0,1.72723677587501,0,0,0.5085370753095,0,0,0,0,3.20160830922422,0,0.566560457600628,0.58620893471233,0,0.258565912723101,0.26446520348538,0,0,0,0.157204305099666,0,0,0.592834895693833,4.26274094333136,1.91502377331055,0,0,0,0,0,0,0,0,0,0.110929051536852,0.248385611765534,0,0,0,0,5.88164549245429,0,0,0,0,0,0,0,0,0,0,0,0,0.63718706865481,0,0,0.829412415681711,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73357847366573,3.21662387062389,5.48088013126944,0,0,11.013151702791,0,0,0,0,0,7.26452494808212,0,0,0,0.138258436151731,0,0,0,0.982829546539238,0.245772908753719,0,0.59996218756479,0.320075189082423,4.64980445084202,3.40509572140102,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.3062454773532,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0.397832444232549,1.50420656698514,0,0,0.523813388962845,0,1.18284868973636,0,0,0,0,0,0,0,0,0,0,0,0,0.455324382702595,0.266107110487916,4.83982747734273,0,0.0679697329768317,0.0657727735628491,0,0,0,0.157115589916002,0,0,3.23891386827932,5.25526856675755,0.142953088353313,0,3.83596703714813,0,0,0,0,0,0,0,0,0,0,0,0,0,0.392600934460972,0,0,0.102662806856247,1.1598144313382,0,0,0,0,0,0,0.603851374266694,0,0,0,0.245148321753905,0,0,0,0,0,0.751871343838829,0.709036767709349,4.4973520166218,0,2.11736923029415,0,0,0,0.286679166302903,0,0,0,0,0,0,0,0.126166424835079,0.655593431782173,0.126698501011437,0.101988829741982,1.87052183685892,1.19463369395298,0.250707539292375,0.0757786982182394,0.535928260312357,0,0.20686599172379,0.213233981900981,0.23806443146374,1.0334225573761,2.60713800042603,0.448527450322454,0.12729431655633,0,0,0,0.875576689189638,0.358611026963382,0,0,0.213454691755431,0,0.269475606319761,0,0.366724332548599,0,0,0.201273793591026,7.37307532297436 | |||
|short_description=p6@FAM125A | |||
}} |
Latest revision as of 12:05, 16 September 2015
Short description: | p6@FAM125A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_FAM125A_5end |
Coexpression cluster: | NA |
Association with transcript: | -18bp_to_ENST00000529490_5end |
EntrezGene: | FAM125A |
HGNC: | 25153 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 1.14e-11 | 115 |
classical monocyte | 3.00e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.00e-10 | 42 |
hematopoietic lineage restricted progenitor cell | 4.93e-10 | 120 |
leukocyte | 2.68e-09 | 136 |
defensive cell | 2.09e-08 | 48 |
phagocyte | 2.09e-08 | 48 |
lymphocyte of B lineage | 2.38e-08 | 24 |
pro-B cell | 2.38e-08 | 24 |
lymphocyte | 2.08e-07 | 53 |
common lymphoid progenitor | 2.08e-07 | 53 |
hematopoietic cell | 3.27e-07 | 177 |
hematopoietic oligopotent progenitor cell | 4.99e-07 | 161 |
hematopoietic multipotent progenitor cell | 4.99e-07 | 161 |
hematopoietic stem cell | 5.21e-07 | 168 |
lymphoid lineage restricted progenitor cell | 9.87e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
larynx | 5.02e-19 | 9 |
upper respiratory tract | 1.13e-15 | 19 |
foregut | 1.38e-07 | 87 |
thymus | 2.59e-07 | 4 |
hemolymphoid system gland | 2.59e-07 | 4 |
thymic region | 2.59e-07 | 4 |
pharyngeal gland | 2.59e-07 | 4 |
thymus primordium | 2.59e-07 | 4 |
segment of respiratory tract | 4.95e-07 | 47 |
hematopoietic system | 9.90e-07 | 98 |
blood island | 9.90e-07 | 98 |
Ontology term | p-value | n |
---|---|---|
cancer | 5.79e-11 | 235 |
disease of cellular proliferation | 1.89e-10 | 239 |
carcinoma | 2.10e-10 | 106 |
lymphoma | 2.57e-09 | 10 |
cell type cancer | 5.76e-09 | 143 |