FFCP PHASE1:Hg19::chr19:14444525..14444559,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_uc002myk.2_5end | |||
|cluster_id=chr19:14444525..14444559,+ | |||
|coexpression_cluster_id=C158 | |||
|description=CAGE_peak_1_at_uc002myk.2_5end | |||
|id=chr19:14444525..14444559,+ | |||
|ontology_enrichment_celltype=CL:0000066!5.87e-08!254;CL:0002322!2.91e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000650;7.52e-08;2!CL:1000500;7.52e-08;2!CL:1000618;7.52e-08;2!CL:1001318;7.52e-08;2!CL:0002173;7.52e-08;2!CL:0000082;7.49e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000650,9.19e-08,2;CL:1000500,9.19e-08,2;CL:1000618,9.19e-08,2;CL:1001318,9.19e-08,2;CL:0002173,9.19e-08,2;CL:0000082,7.34e-07,19 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:0050687!3.12e-20!143;DOID:305!2.25e-19!106;DOID:14566!1.89e-15!239;DOID:162!4.18e-14!235 | |||
|ontology_enrichment_disease_v019=DOID:3371;7.13e-15;1!DOID:4549;7.13e-15;1!DOID:5861;7.13e-15;1!DOID:6496;7.13e-15;1!DOID:6193;1.07e-14;1!DOID:1115;6.57e-11;20!DOID:1324;1.52e-08;15!DOID:0050615;4.82e-08;16!DOID:4074;5.37e-08;2!DOID:4905;5.37e-08;2!DOID:3350;5.37e-08;2!DOID:3498;5.37e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,6.22e-15,1;DOID:4549,6.22e-15,1;DOID:5861,6.22e-15,1;DOID:6496,6.22e-15,1;DOID:6193,1.23e-14,1;DOID:0050687,3.11e-14,143;DOID:1115,6.08e-11,20;DOID:1324,1.48e-08,15;DOID:0050615,4.71e-08,16;DOID:162,5.24e-08,235;DOID:4074,5.37e-08,2;DOID:4905,5.37e-08,2;DOID:3498,5.37e-08,2;DOID:3350,5.74e-08,2;DOID:14566,8.32e-08,239;DOID:305,3.06e-07,106 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003567;7.52e-08;2!UBERON:0003838;7.52e-08;2!UBERON:0003586;7.52e-08;2!UBERON:0005169;7.52e-08;2!UBERON:0002321;7.52e-08;2!UBERON:0005215;7.52e-08;2!UBERON:0002303;7.52e-08;2!UBERON:0002319;7.52e-08;2!UBERON:0004802;7.49e-07;19!UBERON:0000115;7.49e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003567,9.19e-08,2;UBERON:0003838,9.19e-08,2;UBERON:0003586,9.19e-08,2;UBERON:0005169,9.19e-08,2;UBERON:0002321,9.19e-08,2;UBERON:0005215,9.19e-08,2;UBERON:0002303,9.19e-08,2;UBERON:0002319,9.19e-08,2;UBERON:0004802,7.34e-07,19;UBERON:0000115,7.34e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246242116153576,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12786256184353,0,0,0.289693037921647,0,0.486634870302636,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151357427644931,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0.121973706129595,0.132529768321485,0.116193942869518,0.414644220061482,0.252320850875628,0,0,0,0,0,0,0,0,0,0.220587945464788,0,0,0,0.392442930250692,0.38474715694639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0.288732895522148,0,0,0,0.858486162094873,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0.112131084345361,0,0,0,3.57656445851882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00337954770971,0,0,0.223874754722178,0,0,0,0,0,0,0,0.082509499920588,0,0,0,0,0,0.15350367472613,0,0,0.145016693914229,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,0,0,0,0,0.748562161632879,0,13.956460001194,0,0,0,0,0,0,0,0,0.329607748453519,0,0,0,0,0,0,0,0.539210106883961,0,0,0,0,0,0,0,0,0.260427761085233,0.174919999992391,0,0.568967241427498,0.508507300585533,0.945550727071745,0,0,0,0.885741385813839,0.120596438625408,0,0,0,0,0,0.278847488557207,0.0769502585037971,0.113942055847001,0,0,0.54323685961004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134802265961354,0,0,0,0.391329237864179,2.18502341580683,0,0,0,0,0,0,0,0,0.313932918407225,0,0,1.94144542218394,0.173559738335131,0.0979923974143777,0.34823682632161,0,2.0638323896594,1.16107597546902,2.48503678093031,1.47807822695777,0,3.88326957442601,0,0,0.19871461170299,0,0.977756913674015,0,0,0,0.144090417154106,0.687219576995494,0,0,0.49701014226173,0,0.407712618220842,0.836822770498666,0,0,0,0,0,0,0,0,0,0,0.998395002494955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.0788057072991982,0.209818352539992,0.211200673038813,0,0.959575986597226,0,0,0.5085370753095,0,0,0.326587360109409,0,0,0,1.47305718976163,0,0,0,0,1.53978154095896,1.40963004463334,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0.1251909307065,0,0.110929051536852,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414706207840855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231522474323834,0.489473409012935,0,0.617602894321944,0.219284049578707,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215649622793364,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0,0,0.196295437002051,0,0,0,0,0,0,0,0,0,0,0,0.295712172434091,0,0,0,0,0,0,0,0.175871244359621,0.127762427639595,0,0,0,0,0.177404740325278,0,0,0.0679697329768317,0,0.472775363535873,0.556157009460346,0.078493092850514,0.157115589916002,0,0,0,0,0.142953088353313,0,3.13851848493938,0.173858272302579,0,0,0,0,0,0.236664001461131,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,4.28112326799247,0,0,0,0.154348316215889,0,0,0,0,0.196308467114945,0.297046400327086,0,0,0.375935671919414,0,0,0,0.705789743431384,0,0,0,0,0,0,0,0,0,0,0,0.252332849670158,0.327796715891087,0.126698501011437,0.815910637935854,0.26721740526556,0.18378979906969,0.752122617877125,0,0,0,0.103432995861895,0,0,0,0.0620747142958579,0,0,0,0,0,0,0.143444410785353,0,0,0.853818767021724,0,0.449126010532934,0,0.122241444182866,0,0,0,0 | |||
|short_description=p1@uc002myk.2 | |||
}} |
Latest revision as of 04:20, 26 July 2015
Short description: | p1@uc002myk.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_uc002myk.2_5end |
Coexpression cluster: | C158_adrenal_gastric_temporal_parietal_duodenum_caudate_putamen |
Association with transcript: | 0bp_to_uc002myk.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesangial cell | 9.19e-08 | 2 |
kidney interstitial cell | 9.19e-08 | 2 |
juxtaglomerular complex cell | 9.19e-08 | 2 |
renal interstitial pericyte | 9.19e-08 | 2 |
extraglomerular mesangial cell | 9.19e-08 | 2 |
epithelial cell of lung | 7.34e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
abdomen connective tissue | 9.19e-08 | 2 |
abdominal segment connective tissue | 9.19e-08 | 2 |
trunk connective tissue | 9.19e-08 | 2 |
interstitial tissue | 9.19e-08 | 2 |
extraglomerular mesangium | 9.19e-08 | 2 |
kidney interstitium | 9.19e-08 | 2 |
juxtaglomerular apparatus | 9.19e-08 | 2 |
mesangium | 9.19e-08 | 2 |
respiratory tract epithelium | 7.34e-07 | 19 |
lung epithelium | 7.34e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 6.22e-15 | 1 |
extraosseous chondrosarcoma | 6.22e-15 | 1 |
myxoid chondrosarcoma | 6.22e-15 | 1 |
extraskeletal myxoid chondrosarcoma | 6.22e-15 | 1 |
epithelioid sarcoma | 1.23e-14 | 1 |
cell type cancer | 3.11e-14 | 143 |
sarcoma | 6.08e-11 | 20 |
lung cancer | 1.48e-08 | 15 |
respiratory system cancer | 4.71e-08 | 16 |
cancer | 5.24e-08 | 235 |
pancreas adenocarcinoma | 5.37e-08 | 2 |
pancreatic carcinoma | 5.37e-08 | 2 |
pancreatic ductal adenocarcinoma | 5.37e-08 | 2 |
mesenchymal cell neoplasm | 5.74e-08 | 2 |
disease of cellular proliferation | 8.32e-08 | 239 |
carcinoma | 3.06e-07 | 106 |