FFCP PHASE1:Hg19::chr18:74692006..74692017,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4155 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=6925 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-54bp_to_BC130034_5end | |||
|cluster_id=chr18:74692006..74692017,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_28_at_MBP_5end | |||
|id=chr18:74692006..74692017,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.35e-20;82!UBERON:0006241;6.23e-19;3!UBERON:0003057;6.23e-19;3!UBERON:0002532;4.59e-08;206!UBERON:0010316;4.59e-08;206!UBERON:0005425;1.50e-07;1!UBERON:0006222;2.84e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.82e-106!57;UBERON:0005068!1.82e-106!57;UBERON:0006241!1.82e-106!57;UBERON:0007135!1.82e-106!57;UBERON:0002616!1.30e-86!59;UBERON:0001017!2.82e-86!82;UBERON:0005743!6.40e-82!86;UBERON:0000955!2.03e-80!69;UBERON:0006238!2.03e-80!69;UBERON:0000073!2.69e-77!94;UBERON:0001016!2.69e-77!94;UBERON:0002780!5.28e-77!41;UBERON:0001890!5.28e-77!41;UBERON:0006240!5.28e-77!41;UBERON:0002020!4.69e-75!34;UBERON:0003528!4.69e-75!34;UBERON:0003080!4.86e-75!42;UBERON:0003075!5.54e-75!86;UBERON:0007284!5.54e-75!86;UBERON:0001893!8.09e-75!34;UBERON:0002791!2.29e-71!33;UBERON:0002346!2.84e-71!90;UBERON:0001869!2.79e-67!32;UBERON:0007023!1.61e-63!115;UBERON:0002619!1.86e-50!22;UBERON:0003056!9.29e-50!61;UBERON:0000033!3.89e-44!123;UBERON:0000956!4.06e-44!25;UBERON:0000203!4.06e-44!25;UBERON:0001950!9.06e-44!20;UBERON:0000153!1.09e-41!129;UBERON:0007811!1.09e-41!129;UBERON:0004121!2.45e-41!169;UBERON:0000924!3.57e-40!173;UBERON:0006601!3.57e-40!173;UBERON:0002308!2.25e-34!9;UBERON:0000125!2.25e-34!9;UBERON:0003076!7.30e-31!15;UBERON:0003057!7.30e-31!15;UBERON:0009663!1.37e-26!7;UBERON:0002420!1.58e-26!9;UBERON:0007245!1.58e-26!9;UBERON:0010009!1.58e-26!9;UBERON:0010011!1.58e-26!9;UBERON:0000454!1.58e-26!9;UBERON:0000025!3.67e-25!194;UBERON:0002298!6.24e-25!8;UBERON:0004732!8.11e-24!13;UBERON:0000200!7.37e-23!6;UBERON:0004733!2.59e-20!12;UBERON:0002028!2.59e-20!12;UBERON:0007277!2.59e-20!12;UBERON:0004111!1.81e-18!241;UBERON:0000483!3.73e-15!309;UBERON:0000369!3.74e-15!4;UBERON:0002435!3.74e-15!4;UBERON:0000204!3.74e-15!4;UBERON:0010082!3.74e-15!4;UBERON:0000477!4.01e-15!286;UBERON:0000119!6.46e-15!312;UBERON:0000064!1.11e-13!219;UBERON:0002240!1.54e-13!3;UBERON:0006331!1.75e-13!3;UBERON:0000988!2.85e-13!3;UBERON:0001896!3.49e-13!3;UBERON:0005290!3.49e-13!3;UBERON:0010096!3.49e-13!3;UBERON:0002021!4.99e-13!5;UBERON:0001872!6.81e-13!5;UBERON:0000349!1.77e-12!5;UBERON:0002771!2.87e-12!3;UBERON:0000475!2.91e-12!365;UBERON:0001871!5.62e-12!7;UBERON:0005383!1.14e-11!3;UBERON:0005382!1.14e-11!3;UBERON:0002680!7.84e-11!9;UBERON:0001895!7.84e-11!9;UBERON:0010092!7.84e-11!9;UBERON:0005162!1.01e-09!2;UBERON:0000122!1.01e-09!2;UBERON:0002148!1.60e-09!2;UBERON:0009662!1.60e-09!2;UBERON:0001875!2.95e-09!2;UBERON:0006514!2.95e-09!2;UBERON:0001897!3.20e-09!2;UBERON:0001954!1.19e-08!2;UBERON:0003022!1.19e-08!2;UBERON:0002421!1.19e-08!2;UBERON:0002600!1.19e-08!2;UBERON:0001870!1.56e-08!2;UBERON:0001873!2.38e-08!2;UBERON:0010122!2.38e-08!2;UBERON:0005174!2.81e-08!5;UBERON:0001137!2.81e-08!5;UBERON:0002360!4.36e-08!2;UBERON:0000094!4.36e-08!2;UBERON:0007645!4.36e-08!2;UBERON:0000062!9.16e-08!511 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.10e-46;34!UBERON:0002780;1.53e-43;41!UBERON:0001890;1.53e-43;41!UBERON:0003528;2.87e-43;34!UBERON:0002020;2.87e-43;34!UBERON:0000073;9.59e-43;53!UBERON:0002616;9.59e-43;53!UBERON:0001869;4.49e-41;32!UBERON:0002791;2.68e-40;32!UBERON:0002619;2.02e-38;22!UBERON:0001950;6.41e-36;20!UBERON:0002298;3.97e-35;6!UBERON:0000956;1.08e-33;25!UBERON:0000203;1.08e-33;25!UBERON:0001017;1.19e-29;75!UBERON:0000955;4.35e-25;68!UBERON:0001016;1.79e-23;83!UBERON:0000125;4.32e-23;9!UBERON:0002308;4.32e-23;9!UBERON:0004732;1.16e-21;13!UBERON:0002240;6.23e-19;3!UBERON:0005174;6.23e-19;3!UBERON:0001137;6.23e-19;3!UBERON:0000988;1.39e-18;3!UBERON:0001896;2.43e-18;3!UBERON:0005290;2.43e-18;3!UBERON:0002021;3.18e-18;5!UBERON:0001872;6.26e-18;5!UBERON:0004733;2.60e-17;12!UBERON:0002028;2.60e-17;12!UBERON:0007023;5.07e-16;114!UBERON:0009663;1.55e-13;7!UBERON:0005162;2.43e-13;2!UBERON:0000122;2.43e-13;2!UBERON:0002148;4.04e-13;2!UBERON:0006331;4.04e-13;2!UBERON:0009662;4.04e-13;2!UBERON:0001875;1.01e-12;2!UBERON:0006514;1.01e-12;2!UBERON:0001897;1.24e-12;2!UBERON:0010225;1.24e-12;2!UBERON:0002420;1.48e-10;9!UBERON:0007245;1.48e-10;9!UBERON:0010009;1.48e-10;9!UBERON:0010011;1.48e-10;9!UBERON:0000454;1.48e-10;9!UBERON:0011216;6.88e-10;132!UBERON:0000200;3.66e-09;6!UBERON:0001894;4.48e-08;7!UBERON:0000941;1.50e-07;1!UBERON:0001785;1.50e-07;1!UBERON:0002464;1.50e-07;1!UBERON:0004904;1.50e-07;1!UBERON:0001021;1.50e-07;1!UBERON:0002336;1.80e-07;1!UBERON:0002038;1.80e-07;1!UBERON:0011215;1.80e-07;1!UBERON:0001018;1.80e-07;1!UBERON:0009661;1.80e-07;1!UBERON:0002950;1.80e-07;1!UBERON:0002473;1.80e-07;1!UBERON:0005340;1.80e-07;1!UBERON:0003544;1.80e-07;1!UBERON:0005970;1.80e-07;1!UBERON:0002316;1.80e-07;1!UBERON:0001020;1.80e-07;1!UBERON:0001891;1.80e-07;1!UBERON:0002437;1.80e-07;1!UBERON:0010314;2.24e-07;132!UBERON:0002581;4.99e-07;1!UBERON:0002902;8.42e-07;1!UBERON:0001882;8.42e-07;1!UBERON:0002022;8.42e-07;1!UBERON:0009899;8.42e-07;1!UBERON:0007190;8.42e-07;1!UBERON:0005403;8.42e-07;1!UBERON:0002784;9.89e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.72e-91,56;UBERON:0005068,2.72e-91,56;UBERON:0006241,2.72e-91,56;UBERON:0007135,2.72e-91,56;UBERON:0000073,1.37e-77,53;UBERON:0002616,1.37e-77,53;UBERON:0001017,1.08e-69,81;UBERON:0000955,6.21e-68,68;UBERON:0006238,6.21e-68,68;UBERON:0001016,1.21e-66,89;UBERON:0003075,2.05e-65,82;UBERON:0007284,2.05e-65,82;UBERON:0002346,3.82e-62,86;UBERON:0002780,1.07e-60,41;UBERON:0001890,1.07e-60,41;UBERON:0003080,1.07e-60,41;UBERON:0006240,1.07e-60,41;UBERON:0003528,2.10e-54,34;UBERON:0002020,2.10e-54,34;UBERON:0001893,3.67e-54,34;UBERON:0010371,1.67e-50,104;UBERON:0007023,2.93e-49,114;UBERON:0002791,1.09e-45,32;UBERON:0001869,2.25e-45,32;UBERON:0003056,9.12e-44,61;UBERON:0010314,1.19e-38,132;UBERON:0002619,1.87e-38,22;UBERON:0001950,5.30e-36,20;UBERON:0002298,4.34e-35,6;UBERON:0000956,1.01e-33,25;UBERON:0000203,1.01e-33,25;UBERON:0004121,1.81e-32,171;UBERON:0000924,1.81e-32,171;UBERON:0006601,1.81e-32,171;UBERON:0003076,9.41e-31,15;UBERON:0003057,9.41e-31,15;UBERON:0011216,1.74e-23,223;UBERON:0000125,5.14e-23,9;UBERON:0002308,5.14e-23,9;UBERON:0000025,6.75e-23,192;UBERON:0004732,1.19e-21,13;UBERON:0002240,6.82e-19,3;UBERON:0005174,6.82e-19,3;UBERON:0001137,6.82e-19,3;UBERON:0000988,1.66e-18,3;UBERON:0001896,2.22e-18,3;UBERON:0005290,2.22e-18,3;UBERON:0010096,2.22e-18,3;UBERON:0002021,2.54e-18,5;UBERON:0001872,3.99e-18,5;UBERON:0004733,2.72e-17,12;UBERON:0002028,2.72e-17,12;UBERON:0007277,2.72e-17,12;UBERON:0004111,3.73e-17,240;UBERON:0009663,1.71e-13,7;UBERON:0005162,2.29e-13,2;UBERON:0000122,2.29e-13,2;UBERON:0000483,2.40e-13,306;UBERON:0000119,3.70e-13,309;UBERON:0002148,4.42e-13,2;UBERON:0006331,4.42e-13,2;UBERON:0009662,4.42e-13,2;UBERON:0001875,1.07e-12,2;UBERON:0006514,1.07e-12,2;UBERON:0001897,1.21e-12,2;UBERON:0010225,1.21e-12,2;UBERON:0002420,1.60e-10,9;UBERON:0007245,1.60e-10,9;UBERON:0010009,1.60e-10,9;UBERON:0010011,1.60e-10,9;UBERON:0000454,1.60e-10,9;UBERON:0000200,3.41e-09,6;UBERON:0001894,4.43e-08,7;UBERON:0006222,4.43e-08,7;UBERON:0000941,1.46e-07,1;UBERON:0001785,1.46e-07,1;UBERON:0002464,1.46e-07,1;UBERON:0004904,1.46e-07,1;UBERON:0001021,1.46e-07,1;UBERON:0003902,1.46e-07,1;UBERON:0005425,1.46e-07,1;UBERON:0002336,1.75e-07,1;UBERON:0011215,1.75e-07,1;UBERON:0001018,1.75e-07,1;UBERON:0002473,1.75e-07,1;UBERON:0005340,1.75e-07,1;UBERON:0003544,1.75e-07,1;UBERON:0005970,1.75e-07,1;UBERON:0002316,1.75e-07,1;UBERON:0001020,1.75e-07,1;UBERON:0002437,1.75e-07,1;UBERON:0002038,1.86e-07,1;UBERON:0009661,1.86e-07,1;UBERON:0002950,1.86e-07,1;UBERON:0001891,1.86e-07,1;UBERON:0009616,1.86e-07,1;UBERON:0010286,1.86e-07,1;UBERON:0002581,4.31e-07,1;UBERON:0002902,6.49e-07,1;UBERON:0009899,6.49e-07,1;UBERON:0007190,8.18e-07,1;UBERON:0001882,9.18e-07,1;UBERON:0005403,9.18e-07,1;UBERON:0002022,9.73e-07,1;UBERON:0002784,9.76e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063497894292169,0,1.17217447210047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984685914873589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90799823828566,2.69027484669369,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.361789315876224,0,0.331737779793674,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.41412462787447,0,4.45102446878144,0.182454789215666,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13959432720582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40168115483916,5.75002591346371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,2.04305109167363,0,0,0,0,0,1.27574068981852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.85199668716218,5.02483886622222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,5.36915565568638,0.751145584238999,5.73409195690071,3.32787154610557,3.97416978824854,0,0,0.151649117541648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41304295212211,1.41696576325585,3.67157875831448,2.66651273512982,0,1.86724581653388,0.968853873791107,14.2769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48582686160468,1.56215619722769,1.86018116851066,1.64881106504158,0,0,0,0,0,0,0,0,0,0,0,0,3.05863798395743,2.82822926320251,0,0,0,0.471346769748006,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.1342096322761,8.91139200981258,4.226557275834,0,0,0,0,0,0,0,0,0,7.02363957442111,0,2.44769364687293,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48750831837634,4.86135080550908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p28@MBP | |||
}} |
Latest revision as of 16:57, 24 September 2015
Short description: | p28@MBP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_28_at_MBP_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -54bp_to_BC130034_5end |
EntrezGene: | MBP |
HGNC: | 6925 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data