FFCP PHASE1:Hg19::chr18:47087361..47087374,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9388 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6623 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=292bp_to_AK125344_5end | |||
|cluster_id=chr18:47087361..47087374,+ | |||
|coexpression_cluster_id=C113 | |||
|description=CAGE_peak_3_at_LIPG_5end | |||
|id=chr18:47087361..47087374,+ | |||
|ontology_enrichment_celltype=CL:0002139!1.25e-13!24;CL:0000115!1.97e-12!35;CL:0002078!2.57e-10!44;CL:0000071!2.42e-08!18;CL:0002546!2.42e-08!18;CL:0000213!9.72e-08!57;CL:0000215!9.72e-08!57;CL:0005020!1.70e-07!6;CL:0002138!1.70e-07!6;CL:0005022!1.70e-07!6;CL:1000413!8.57e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002605;5.80e-13;3!CL:0000115;2.57e-10;36!CL:1000413;1.08e-09;9!CL:0002139;2.50e-09;24!CL:0000071;2.74e-08;18!CL:0002544;6.48e-07;6!CL:0002548;6.48e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002605,1.00e-12,3;CL:0000115,9.18e-12,36;CL:1000413,9.86e-10,9;CL:0002139,2.13e-09,24;CL:0002078,2.91e-09,45;CL:0000071,2.38e-08,18;CL:0002546,2.38e-08,18;CL:0000213,5.12e-07,58;CL:0000215,5.12e-07,58;CL:0002544,5.93e-07,6;CL:0002548,7.75e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.69e-08;5!CL:0002546;2.74e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3347;9.82e-11;1!DOID:3371;2.38e-10;1!DOID:4549;2.38e-10;1!DOID:5861;2.38e-10;1!DOID:6496;2.38e-10;1!DOID:201;4.87e-07;6!DOID:0060100;4.87e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3347,1.08e-10,1;DOID:3371,1.19e-10,1;DOID:4549,1.19e-10,1;DOID:5861,1.19e-10,1;DOID:6496,1.19e-10,1;DOID:201,4.00e-07,6;DOID:0060100,4.00e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0000055!6.75e-10!69;UBERON:0000483!1.46e-09!309;UBERON:0004111!2.81e-09!241;UBERON:0000119!3.09e-09!312;UBERON:0002049!1.19e-08!79;UBERON:0007798!1.19e-08!79;UBERON:0003914!1.29e-08!118;UBERON:0000025!1.30e-08!194;UBERON:0001986!2.42e-08!18;UBERON:0004638!2.42e-08!18;UBERON:0004852!2.42e-08!18;UBERON:0000477!1.43e-07!286;UBERON:0004872!1.99e-07!84;UBERON:0001981!2.70e-07!60;UBERON:0007500!2.70e-07!60;UBERON:0004537!2.70e-07!60;UBERON:0006965!2.70e-07!60;UBERON:0004535!4.79e-07!110;UBERON:0003915!8.57e-07!9;UBERON:0004700!8.57e-07!9;UBERON:0001917!8.57e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0003915;1.08e-09;9!UBERON:0004700;1.08e-09;9!UBERON:0001917;1.08e-09;9!UBERON:0002046;1.69e-08;5!UBERON:0004638;2.74e-08;18!UBERON:0001986;2.74e-08;18!UBERON:0004852;2.74e-08;18!UBERON:0000487;8.35e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003915,9.86e-10,9;UBERON:0004700,9.86e-10,9;UBERON:0001917,9.86e-10,9;UBERON:0002046,1.63e-08,5;UBERON:0004117,1.63e-08,5;UBERON:0007689,1.63e-08,5;UBERON:0007123,1.63e-08,5;UBERON:0003091,1.63e-08,5;UBERON:0004638,2.38e-08,18;UBERON:0001986,2.38e-08,18;UBERON:0004852,2.38e-08,18;UBERON:0000487,7.44e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0.602694528023977,0.730310090387373,0,0,0,0,1.14494394852423,0.410623275218653,1.00434111675842,0,0,0,0,0,0,0.919421224478927,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0,0,0,0,0,0,0,0,0.596287222100115,0,0.694281003215189,1.13061588384802,2.09749718104953,0.550236083880135,0.417989933073621,0.775250277507987,0.35576626268671,1.33888245105868,0.402829317109147,0,0,1.47065232138347,0,0.803697554556718,0.673588117878509,0.563057402416611,0,0,1.46561395144326,0,0,0,0.496971951695318,0.25326102332916,0.132409180813219,0.573673241497627,0.354668382198357,0,1.06748995729705,0,0,0.538842688278752,1.30769522490767,0.151357427644931,0,0,0,0.570471821544449,0,0.117434498643765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340296549480063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0.286804595389004,0.121973706129595,0.265059536642971,0,0.310983165046111,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,1.40241773803446,0,0,0,0,0,0,0,0.171567810298526,0.878002283269004,1.1240175325762,0.100528972411631,0,0,0,0,0.115930404975077,0.117408694235822,0.288732895522148,0.925971025153221,0.380508304469197,0,0,0,0,0,0,0.503946384596579,0.567100388969546,0.0895585227028483,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0.845302752556,0,0,0,0,0.266422179016099,0,0,0,0.325736184293735,0,0,0.301439377059586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76228387266739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0.512556597022804,0,0,0,0,0.177561725313127,0,0,0,0.120859449591622,0,0,0,0,0,0.451199612907412,0.539107359730903,0,0,0.949964660035881,3.4120015221269,0.340187410553031,0.215915916102139,0,0.541892875087706,0,0.509752546090077,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0.096670718292122,0,0.307007349452259,0.137836572484531,0,0,0.170453254832202,0.267096106940212,0.165284915360978,0,0.255225424989168,0.10115778085555,0,0,0,0.308033580176089,0,0,0,0.286249773483982,0,0,0,0,0,0,0,0,0,0.117812402345686,0.808729926293264,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0.143411352204052,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12284324244932,0,0,0,0,0,0,0,0,0.140669416410513,0.111308705022906,0,0,0,0,0,0.511343412510774,0,0,0.269605053441981,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0.689486746482929,0,0,0,0,0,0.331737779793674,0.295547618953547,0,0,0.278847488557207,0.0769502585037971,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.282706142867882,0,0,0.265372693510018,0,0,0,0,0.202203398942031,0,0.234264445725339,0,0,0,0.394584402849391,0,0.61214552326098,0.379119477770928,0.450970258243478,0,0,0,0,0,0.284609546029793,0,0.520679215005393,0,0,0.17472666824203,0,0,0,0,0,1.85337866052151,0.225980740780532,0,0,0.0633107959558787,0.391102765469606,0,0,0.19980960958213,0.144090417154106,0,0,0,0,0,0,0,0,1.15580235960608,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0.272406812223151,0.321506296930038,0.137539436597234,0,0,0,0.0607495566580247,0,0.315222829196793,1.10154635083496,0,0,0,0,0,0.5085370753095,0,0,0,0,0,0,0.453248366080503,0.58620893471233,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310482014706917,0,0,0,0,0,0,0.28984205722165,0,0.701139929541673,0,0,0,0,0.228840068396924,0,0.621748802331122,0.147855149989634,0.318593534327405,0,1.39736661188633,0.829412415681711,0.265841714557995,0,0,0,0,0.181848659202559,0,0.928067519756987,0,0,0.343395705182793,0.336749488765919,0,0,0,0,0,0.231522474323834,0,0,0.617602894321944,0,0,0,0,0,0,0,0.138258436151731,0,0,0.327130788511688,0.327609848846413,0,0,0,0,0,0,0,0.419638523158333,0.622077260032973,0,0.323474434190045,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,2.0710797781803,0,0.0752103283492573,0,0,0,0,0.147856086217045,0,0,0,0,0.546974809018219,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0.111231401892069,0.156986185701028,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0,0,0,0,0,0.846774100381858,0,0,0,0,0.098150233615243,0.121917924982269,0.647428837187895,0,0,0,0.233939463462106,0,0,0,0.219881033490858,0.754814217833368,0.0771741581079447,0,0.940634592723046,0,0,0,0,0,0,0,0,0,0,0,0.0802413666891683,0,0,0,0.157771562193185,0.0679914901909147,1.74540276136151,0.5290268405154,0,0,0,0,0,0.126698501011437,0.101988829741982,0,0,0,0.0757786982182394,0,0,0,0.852935927603924,3.33290204049236,0.0645889098360061,0.0620747142958579,0,14.7024935622561,2.22328907854041,0,0,0,0.143444410785353,0.332660356546013,0.0814032686109745,0,0,0,0,0,0.406896178315738,0,0,0 | |||
|short_description=p3@LIPG | |||
}} |
Latest revision as of 17:42, 19 September 2015
Short description: | p3@LIPG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_LIPG_5end |
Coexpression cluster: | C113_thyroid_throat_lung_lymph_small_colon_trachea |
Association with transcript: | 292bp_to_AK125344_5end |
EntrezGene: | LIPG |
HGNC: | 6623 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebral cortex | 1.00e-12 | 3 |
endothelial cell | 9.18e-12 | 36 |
endothelial cell of artery | 9.86e-10 | 9 |
endothelial cell of vascular tree | 2.13e-09 | 24 |
meso-epithelial cell | 2.91e-09 | 45 |
blood vessel endothelial cell | 2.38e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.38e-08 | 18 |
lining cell | 5.12e-07 | 58 |
barrier cell | 5.12e-07 | 58 |
aortic endothelial cell | 5.93e-07 | 6 |
cardiac fibroblast | 7.75e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
endothelial tube | 9.86e-10 | 9 |
arterial system endothelium | 9.86e-10 | 9 |
endothelium of artery | 9.86e-10 | 9 |
thyroid gland | 1.63e-08 | 5 |
pharyngeal pouch | 1.63e-08 | 5 |
thyroid diverticulum | 1.63e-08 | 5 |
pharyngeal pouch 2 | 1.63e-08 | 5 |
thyroid primordium | 1.63e-08 | 5 |
blood vessel endothelium | 2.38e-08 | 18 |
endothelium | 2.38e-08 | 18 |
cardiovascular system endothelium | 2.38e-08 | 18 |
simple squamous epithelium | 7.44e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
osteosarcoma | 1.08e-10 | 1 |
chondrosarcoma | 1.19e-10 | 1 |
extraosseous chondrosarcoma | 1.19e-10 | 1 |
myxoid chondrosarcoma | 1.19e-10 | 1 |
extraskeletal myxoid chondrosarcoma | 1.19e-10 | 1 |
connective tissue cancer | 4.00e-07 | 6 |
musculoskeletal system cancer | 4.00e-07 | 6 |