FFCP PHASE1:Hg19::chr17:74136083..74136116,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=360bp_to_AB463648,AB464532_5end | |||
|cluster_id=chr17:74136083..74136116,- | |||
|coexpression_cluster_id=C2436 | |||
|description=CAGE_peak_1_at_AB463648_5end,CAGE_peak_1_at_AB464532_5end | |||
|id=chr17:74136083..74136116,- | |||
|ontology_enrichment_celltype=CL:0002322!1.99e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0002322;4.64e-14;5!CL:0000123;5.22e-07;2!CL:0000242;5.22e-07;2!CL:1000507;7.99e-07;10!CL:1000494;7.99e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,4.29e-14,5;CL:0000242,4.93e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0007297;3.89e-07;2!UBERON:0009117;7.64e-07;10!UBERON:0005564;7.64e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3119;2.05e-07;14!DOID:3493;9.30e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.11e-07,106;DOID:3119,2.05e-07,14;DOID:0050687,5.23e-07,143;DOID:3493,9.59e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.48e-15!115;UBERON:0003135!4.01e-11!11;UBERON:0000058!1.95e-09!26;UBERON:0004876!2.50e-08!20;UBERON:0000080!3.18e-08!18;UBERON:0002120!3.18e-08!18;UBERON:0004875!3.18e-08!18;UBERON:0005721!3.18e-08!18;UBERON:0005754!3.18e-08!18;UBERON:0007297!3.18e-08!18;UBERON:0000464!6.42e-08!104;UBERON:0000473!7.89e-08!8;UBERON:0003887!9.96e-08!21;UBERON:0000489!1.73e-07!32;UBERON:0006555!3.22e-07!17;UBERON:0005103!3.22e-07!17;UBERON:0000083!3.22e-07!17;UBERON:0009201!3.22e-07!17;UBERON:0004819!3.22e-07!17;UBERON:0006553!3.22e-07!17;UBERON:0003074!3.22e-07!17;UBERON:0003060!3.22e-07!17 | |||
|ontology_enrichment_uberon_v019=UBERON:0003135;6.30e-12;11!UBERON:0006947;6.04e-10;3!UBERON:0004054;6.04e-10;3!UBERON:0003101;9.31e-09;22!UBERON:0000079;9.31e-09;22!UBERON:0000473;1.46e-08;8!UBERON:0005904;1.55e-07;4!UBERON:0000058;1.78e-07;10!UBERON:0004211;7.99e-07;10!UBERON:0009773;7.99e-07;10!UBERON:0001231;7.99e-07;10!UBERON:0004810;7.99e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,4.16e-12,11;UBERON:0006947,5.79e-10,3;UBERON:0004054,5.79e-10,3;UBERON:0002113,5.56e-09,26;UBERON:0003918,5.56e-09,26;UBERON:0011143,5.56e-09,26;UBERON:0005095,5.56e-09,26;UBERON:0007687,5.56e-09,26;UBERON:0003101,6.33e-09,22;UBERON:0000079,6.33e-09,22;UBERON:0000473,9.89e-09,8;UBERON:0006555,8.45e-08,16;UBERON:0004819,8.45e-08,16;UBERON:0005904,1.51e-07,4;UBERON:0000489,3.31e-07,31 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,1.22866968250754,12.5604210235037,0.218441372130172,0.791300934685361,0,0,0,0,0,0,0.369363174230364,0.204000691244253,0.313454721478088,0.286235987131057,0,0,0,0,0,0.393364276848904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0.526768169550154,0,0,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0.14828656316206,1.33770414044857,1.04535523804977,0,0,0,0,1.59282707162048,1.30216690771284,0,0.150575119077773,0.639933055772092,0,0.473554504088034,0,0,0,0.868946423296794,0,0,0,0,0,0,0,0,0,0,0,1.24430121722827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0.312160076830321,0,0,0,0,0.280901613404497,0.204154171254893,0,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.92736894711029,1.32529768321485,3.02104251460748,3.52447587052259,3.5324919122588,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0.100528972411631,0,0,0,0,0.115930404975077,0,0.144366447761074,0,0.570762456703795,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24396869324463,2.01767934783746,1.38866676769018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41849132023278,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0.335032530668698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0.413536052245775,0,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0.308419387605311,0,0,0,0,0,0,0,0,0,0,2.25599806453706,0.693138033939733,6.27479815341484,0,0,0,0,0.215915916102139,0,0.270946437543853,1.00337954770971,2.03901018436031,0.831076008928724,3.80587083027703,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48763373908959,0,1.05650146756755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,0,0,1.70894156152249,0,0,1.29694662238543,0,0,0,0,22.2986596542739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0,0,0,0.19924798825107,0,41.065037900247,0,0,0,5.30223271769228,0,0,0.887790650732402,0,0,0,0.278304294485554,0,0,0,0,0,0.254253650292766,1.18193840883968,0,0,0,0.885741385813839,0.361789315876224,0,0,0.295547618953547,0,0,0,1.53900517007594,0,1.84451123510448,14.0021925279245,0,0,0,0,0,0,0,0,0,0,0,0,0,0.979396848954886,0,0,0,0.442287822516696,0.611030144933625,0,0,0,0.269604531922708,0,0,0,0,0,13.4158696968793,0,0.30607276163049,0.189559738885464,0,0,0,0,0,0,2.84609546029793,0,0,0,0,7.33852006616527,0,0,0,0,0.581934098930517,0,0.225980740780532,0,0,0.0633107959558787,24.4439228418504,0,0.426905989478705,0,47.8380184951632,0,16.1299297990247,0,0,0,0,0,0,0,0,0.136905378891993,0,0,9.98971946261395,0,0,0,0.599037001496973,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0.321506296930038,1.92555211236127,3.32352270423348,0,0,0,0,1.26089131678717,7.18627857449474,0,0,3.26255835443057,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0.129282956361551,0,0,0,1.60181118851542,2.04365596629566,2.07119527673598,0,0.790446527591777,0,0,0.544017803369474,0,0,0,0.628216385000937,0,0,0,2.29363678276028,0.443716206147409,0.310482014706917,0,0,0,0,0.235265819698172,3.74667924645505,11.3038402316444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20130602011215,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,0,0,0.207471757392654,0.161475645631851,1.42769420259154,0,0,0,0,0,0,0,0.676892955143315,0,0,0,0,14.7856086217045,0,0,0,0,0,0,0.496211178389294,0,0,0,0.672567444437648,0,0.227662191351298,0.177404740325278,0,0,0.0679697329768317,0.131545547125698,2.48207065856333,0,1.80534113556182,0,10.650342205924,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,11.854837405346,1.14553434272025,0,0,54.921017012716,4.02415957822496,2.31644057466312,0,0,0,0,0,0,0,0,3.4081560191083,0.150962843566674,0.154348316215889,1.5299169235277,17.8720572617379,0,13.1978866376911,0,0.297046400327086,0.4226557275834,0,0,0.386747327841463,0,0,0,0,1.46067277649303,0,0.143339583151451,0,0.135982980381829,0,1.5870805215462,0.371995018166751,0,0,0.504665699340316,0,0,0.815910637935854,5.34434810531121,1.47031839255752,0.50141507858475,1.97024615367422,2.67964130156179,0,0.103432995861895,0.213233981900981,0.714193294391221,0.129177819672012,0.0620747142958579,0,2.5458863311266,2.42540626749863,0.217716747896961,0,0.134704106029175,0.502055437748735,0.332660356546013,0,4.58927587274176,0,0,0,0.977931553462932,2.44137706989443,0.665756774185513,0.201273793591026,0 | |||
|short_description=p1@AB463648,p1@AB464532 | |||
}} |
Latest revision as of 21:21, 25 July 2015
Short description: | p1@AB463648, p1@AB464532 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_AB463648_5end, CAGE_peak_1_at_AB464532_5end |
Coexpression cluster: | C2436_serous_gastric_argyrophil_gall_smallcell_gastrointestinal_acantholytic |
Association with transcript: | 360bp_to_AB463648, AB464532_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 4.29e-14 | 5 |
Merkel cell | 4.93e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 4.16e-12 | 11 |
male genital duct | 5.79e-10 | 3 |
internal male genitalia | 5.79e-10 | 3 |
kidney | 5.56e-09 | 26 |
kidney mesenchyme | 5.56e-09 | 26 |
upper urinary tract | 5.56e-09 | 26 |
kidney rudiment | 5.56e-09 | 26 |
kidney field | 5.56e-09 | 26 |
male organism | 6.33e-09 | 22 |
male reproductive system | 6.33e-09 | 22 |
testis | 9.89e-09 | 8 |
excretory tube | 8.45e-08 | 16 |
kidney epithelium | 8.45e-08 | 16 |
duct of male reproductive system | 1.51e-07 | 4 |
cavitated compound organ | 3.31e-07 | 31 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.11e-07 | 106 |
gastrointestinal system cancer | 2.05e-07 | 14 |
cell type cancer | 5.23e-07 | 143 |
signet ring cell adenocarcinoma | 9.59e-07 | 2 |