FFCP PHASE1:Hg19::chr17:38859996..38860010,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=192666 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18527 | |||
|TSSclassifier=strong | |||
|UniProt=Q2M2I5 | |||
|association_with_transcript=0bp_to_ENST00000264651,NM_019016,uc002hvd.2_5end | |||
|cluster_id=chr17:38859996..38860010,- | |||
|coexpression_cluster_id=C68 | |||
|description=CAGE_peak_1_at_KRT24_5end | |||
|id=chr17:38859996..38860010,- | |||
|ontology_enrichment_celltype=CL:0000349!1.99e-10!3;CL:0002577!1.99e-10!3;CL:0002623!2.46e-10!3;CL:0002368!4.57e-10!13;CL:0002328!1.52e-09!3;CL:0002202!4.75e-08!9;CL:0002632!4.75e-08!9;CL:0000240!1.11e-07!6;CL:0000311!1.11e-07!6;CL:0000079!1.11e-07!6;CL:0000237!1.11e-07!6;CL:0000036!1.11e-07!6;CL:0000357!1.11e-07!6;CL:0000114!1.11e-07!6;CL:0002536!3.44e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000349;2.54e-32;19!CL:0002577;4.08e-20;3!CL:0002623;6.18e-20;3!CL:0002536;2.39e-13;2!CL:0002537;1.61e-12;5!CL:0000622;3.51e-12;5!CL:0000154;3.12e-10;6!CL:0002541;8.38e-10;3!CL:0002328;4.92e-09;3!CL:0000150;5.76e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,2.54e-32,19;CL:0002577,4.08e-20,3;CL:0002623,6.39e-20,3;CL:0002536,2.39e-13,2;CL:0002537,1.61e-12,5;CL:0000622,3.58e-12,5;CL:0000154,3.17e-10,6;CL:0002541,8.38e-10,3;CL:0002328,4.54e-09,3;CL:0000150,5.82e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0003124;7.26e-08;1!UBERON:0009143;9.75e-08;1!UBERON:0000358;1.26e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!7.37e-26!14;UBERON:0000158!7.37e-26!14;UBERON:0000478!1.10e-16!24;UBERON:0003124!2.15e-16!7;UBERON:0001987!2.41e-13!4;UBERON:0004340!2.41e-13!4;UBERON:0000305!2.23e-11!7;UBERON:0004871!6.75e-10!8;UBERON:0004815!1.52e-09!3;UBERON:0002031!1.52e-09!3;UBERON:0001044!1.60e-08!6;UBERON:0003293!1.60e-08!6;UBERON:0003294!1.60e-08!6;UBERON:0010047!1.60e-08!6;UBERON:0000167!1.60e-08!6;UBERON:0001004!1.40e-07!72;UBERON:0004923!1.85e-07!57;UBERON:0003408!2.67e-07!10;UBERON:0002185!3.01e-07!4;UBERON:0004119!4.23e-07!169;UBERON:0000925!4.23e-07!169;UBERON:0006595!4.23e-07!169;UBERON:0007196!4.63e-07!14;UBERON:0001558!4.63e-07!14 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;2.09e-36;24!UBERON:0005631;6.04e-31;10!UBERON:0000158;6.04e-31;10!UBERON:0001987;3.09e-26;4!UBERON:0000305;7.26e-23;7!UBERON:0001041;3.56e-11;14!UBERON:0001044;3.12e-10;6!UBERON:0003293;3.12e-10;6!UBERON:0003294;3.12e-10;6!UBERON:0010047;3.12e-10;6!UBERON:0003408;3.12e-10;6!UBERON:0000167;3.12e-10;6!UBERON:0003124;8.38e-10;3!UBERON:0000920;8.38e-10;3!UBERON:0004815;4.92e-09;3!UBERON:0002031;4.92e-09;3!UBERON:0002372;6.80e-08;1!UBERON:0001961;6.80e-08;1!UBERON:0001744;6.80e-08;1!UBERON:0001042;6.80e-08;1!UBERON:0001735;6.80e-08;1!UBERON:0004921;1.76e-07;33!UBERON:0006834;2.88e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,6.91e-54,14;UBERON:0000158,6.91e-54,14;UBERON:0000478,2.12e-36,24;UBERON:0003124,4.07e-33,7;UBERON:0001987,3.09e-26,4;UBERON:0004340,3.09e-26,4;UBERON:0000305,7.26e-23,7;UBERON:0004871,5.45e-20,8;UBERON:0004923,8.28e-12,66;UBERON:0000995,2.04e-10,21;UBERON:0001044,3.17e-10,6;UBERON:0003293,3.17e-10,6;UBERON:0003294,3.17e-10,6;UBERON:0010047,3.17e-10,6;UBERON:0000167,3.17e-10,6;UBERON:0005795,6.44e-10,22;UBERON:0003975,6.44e-10,22;UBERON:0000920,8.38e-10,3;UBERON:0004815,4.54e-09,3;UBERON:0002031,4.54e-09,3;UBERON:0004175,1.16e-08,25;UBERON:0002372,6.80e-08,1;UBERON:0001961,6.80e-08,1;UBERON:0001744,6.80e-08,1;UBERON:0001735,6.80e-08,1;UBERON:0006834,3.17e-07,1;UBERON:0000166,4.69e-07,22;UBERON:0004119,9.51e-07,160;UBERON:0000925,9.51e-07,160;UBERON:0006595,9.51e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,3.49506195408276,7.12170841216825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.70297735647684,5.51652734687356,1.8072355126695,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0.486634870302636,0,0,0,0.130979075497713,0,42.269426477425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329250856225877,7.86812272803337,0.201057944823262,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,0,0,920.901562053736,13.3148351608398,31.1462002129571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.384380134730212,0,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0.577332676353072,2.68120910214315,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2409.40933997277,19.5996689349541,8390.40173854262,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.690503839458535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139423744278603,17.5446589388657,0,0,0.269272933229316,0,479.777744236807,0,243.063857864497,0,0,0,0,0,0,0,0,0,0,0,0,11.9431431729421,0.884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0.150323419414493,0,0,0,0,0,0,0,0,0.195984794828755,0,0,0,0,0,0,17.6520010008923,0,0.677942222341597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399358000997982,0,0,0.671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67855409263333,9.95323616052756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,78.9451094447486,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10824246244555,232.51856580196,244.705920282188,0.430227358820278,0,0,0.846774100381858,0,0,0,0,0,0,0,0,0,0,0,0,0.475680363110274,0,0.109940516745429,0,0.0771741581079447,0,0,5.39326307858592,0,0,0,0,0,0,0,0,0,0,0,2.19100916473955,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0.426467963801962,0.23806443146374,0,0.124149428591716,0,0.0636471582781649,0,2.39488422686657,0,119.347837941849,2.29511057256564,0,0,0,0,0,9.38563769613817,1.22241444182866,0,0,0,0 | |||
|short_description=p1@KRT24 | |||
}} |
Latest revision as of 03:18, 20 September 2015
Short description: | p1@KRT24 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KRT24_5end |
Coexpression cluster: | C68_amniotic_chorionic_Placental_salivary_placenta_tongue_mesothelioma |
Association with transcript: | 0bp_to_ENST00000264651, NM_019016, uc002hvd.2_5end |
EntrezGene: | KRT24 |
HGNC: | 18527 |
UniProt: | Q2M2I5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 2.54e-32 | 19 |
placental epithelial cell | 4.08e-20 | 3 |
acinar cell of salivary gland | 6.39e-20 | 3 |
amniotic epithelial cell | 2.39e-13 | 2 |
amnion mesenchymal stem cell | 1.61e-12 | 5 |
acinar cell | 3.58e-12 | 5 |
protein secreting cell | 3.17e-10 | 6 |
chorionic membrane mesenchymal stem cell | 8.38e-10 | 3 |
bronchial epithelial cell | 4.54e-09 | 3 |
glandular epithelial cell | 5.82e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 6.91e-54 | 14 |
membranous layer | 6.91e-54 | 14 |
extraembryonic structure | 2.12e-36 | 24 |
chorion | 4.07e-33 | 7 |
placenta | 3.09e-26 | 4 |
allantois | 3.09e-26 | 4 |
amnion | 7.26e-23 | 7 |
somatic layer of lateral plate mesoderm | 5.45e-20 | 8 |
organ component layer | 8.28e-12 | 66 |
uterus | 2.04e-10 | 21 |
saliva-secreting gland | 3.17e-10 | 6 |
gland of oral region | 3.17e-10 | 6 |
gland of foregut | 3.17e-10 | 6 |
oral gland | 3.17e-10 | 6 |
oral cavity | 3.17e-10 | 6 |
embryonic uterus | 6.44e-10 | 22 |
internal female genitalia | 6.44e-10 | 22 |
egg chorion | 8.38e-10 | 3 |
lower respiratory tract epithelium | 4.54e-09 | 3 |
epithelium of bronchus | 4.54e-09 | 3 |
internal genitalia | 1.16e-08 | 25 |
tonsil | 6.80e-08 | 1 |
mucosa-associated lymphoid tissue | 6.80e-08 | 1 |
lymphoid tissue | 6.80e-08 | 1 |
tonsillar ring | 6.80e-08 | 1 |
uterus or analog | 3.17e-07 | 1 |
oral opening | 4.69e-07 | 22 |
endoderm-derived structure | 9.51e-07 | 160 |
endoderm | 9.51e-07 | 160 |
presumptive endoderm | 9.51e-07 | 160 |