FFCP PHASE1:Hg19::chr16:67233594..67233611,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79767 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17289 | |||
|TSSclassifier=strong | |||
|UniProt=Q96BJ8 | |||
|association_with_transcript=-242bp_to_BC034410_5end | |||
|cluster_id=chr16:67233594..67233611,+ | |||
|description=CAGE_peak_5_at_ELMO3_5end | |||
|id=chr16:67233594..67233611,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.14e-28!254;CL:0002076!3.96e-25!43;CL:0002368!1.29e-21!13;CL:0000223!1.17e-17!59;CL:0002202!3.58e-14!9;CL:0002632!3.58e-14!9;CL:0002159!3.57e-12!13;CL:0002322!7.11e-10!5;CL:0002077!5.29e-09!33;CL:0002251!7.66e-09!21;CL:0002327!9.02e-09!4;CL:0000244!9.58e-09!4;CL:0000731!9.58e-09!4;CL:0000240!1.75e-08!6;CL:0000311!1.75e-08!6;CL:0000079!1.75e-08!6;CL:0000237!1.75e-08!6;CL:0000036!1.75e-08!6;CL:0000357!1.75e-08!6;CL:0000114!1.75e-08!6;CL:0002166!1.06e-07!3;CL:0000068!1.66e-07!3;CL:0000069!1.66e-07!3;CL:0000307!1.66e-07!3;CL:0000377!1.66e-07!3;CL:0002621!2.42e-07!3;CL:0002321!2.52e-07!248;CL:0002328!3.45e-07!3;CL:0000312!4.25e-07!5;CL:0002231!4.88e-07!3;CL:0000349!5.09e-07!3;CL:0002577!5.09e-07!3;CL:0002541!5.74e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002368;7.92e-31;13!CL:0000307;3.04e-20;3!CL:0002166;7.59e-20;3!CL:0002202;4.22e-18;9!CL:0002632;4.22e-18;9!CL:0002076;2.04e-16;42!CL:0002159;3.46e-16;14!CL:0002536;8.01e-14;2!CL:0000349;8.41e-12;19!CL:0002328;8.87e-10;3!CL:0002621;1.63e-09;3!CL:0002252;9.38e-08;1!CL:0002327;2.42e-07;4!CL:0000362;4.22e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,1.77e-30,13;CL:0002166,2.00e-20,3;CL:0000068,7.90e-20,3;CL:0000069,7.90e-20,3;CL:0000307,7.90e-20,3;CL:0000377,7.90e-20,3;CL:0002076,1.31e-19,42;CL:0002202,9.46e-18,9;CL:0002632,9.46e-18,9;CL:0002159,2.48e-16,14;CL:0002536,8.60e-14,2;CL:0000223,1.39e-13,58;CL:0000349,7.15e-12,19;CL:0000066,3.35e-11,253;CL:0002328,1.26e-09,3;CL:0002621,1.94e-09,3;CL:0002252,1.44e-07,1;CL:0002327,2.50e-07,4;CL:0000362,5.00e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000377;3.04e-20;3!CL:0000223;8.00e-08;58 | |||
|ontology_enrichment_disease=DOID:305!2.41e-07!106;DOID:1749!2.92e-07!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!1.28e-13!14;UBERON:0000158!1.28e-13!14;UBERON:0005153!1.00e-12!37;UBERON:0003124!1.91e-10!7;UBERON:0005157!3.31e-10!51;UBERON:0004119!9.23e-10!169;UBERON:0000925!9.23e-10!169;UBERON:0006595!9.23e-10!169;UBERON:0000473!5.48e-09!8;UBERON:0001911!9.02e-09!4;UBERON:0005333!9.02e-09!4;UBERON:0008425!9.02e-09!4;UBERON:0005311!9.02e-09!4;UBERON:0001004!1.02e-08!72;UBERON:0007196!1.65e-08!14;UBERON:0001558!1.65e-08!14;UBERON:0005178!2.59e-08!34;UBERON:0002224!2.59e-08!34;UBERON:0005181!5.59e-08!35;UBERON:0000065!8.95e-08!53;UBERON:0005911!2.11e-07!82;UBERON:0001949!2.42e-07!3;UBERON:0003101!2.44e-07!22;UBERON:0000079!2.44e-07!22;UBERON:0004815!3.45e-07!3;UBERON:0002031!3.45e-07!3;UBERON:0000365!5.74e-07!5;UBERON:0000476!5.74e-07!3;UBERON:0000920!5.74e-07!3;UBERON:0000478!5.85e-07!24;UBERON:0002048!7.07e-07!22;UBERON:0000117!7.07e-07!22;UBERON:0000171!7.07e-07!22;UBERON:0000170!7.07e-07!22;UBERON:0005597!7.07e-07!22;UBERON:0000118!7.07e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;6.88e-16;10!UBERON:0000158;6.88e-16;10!UBERON:0001708;4.93e-15;4!UBERON:0008895;4.93e-15;4!UBERON:0000305;7.01e-15;7!UBERON:0011159;3.89e-12;5!UBERON:0007196;8.71e-11;15!UBERON:0001558;8.71e-11;15!UBERON:0004815;8.87e-10;3!UBERON:0002031;8.87e-10;3!UBERON:0001949;1.63e-09;3!UBERON:0000478;3.12e-09;24!UBERON:0003126;5.63e-09;7!UBERON:0001005;5.63e-09;7!UBERON:0001911;2.42e-07;4!UBERON:0000065;9.36e-07;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,2.69e-16,14;UBERON:0000158,2.69e-16,14;UBERON:0001708,1.83e-15,4;UBERON:0008895,1.83e-15,4;UBERON:0000305,7.86e-15,7;UBERON:0004871,5.32e-13,8;UBERON:0011159,1.77e-12,5;UBERON:0007196,1.39e-10,15;UBERON:0001558,1.39e-10,15;UBERON:0010188,1.75e-10,6;UBERON:0002539,1.75e-10,6;UBERON:0008816,1.75e-10,6;UBERON:0004815,1.26e-09,3;UBERON:0002031,1.26e-09,3;UBERON:0001949,1.94e-09,3;UBERON:0000478,2.76e-09,24;UBERON:0003126,8.38e-09,7;UBERON:0001005,8.38e-09,7;UBERON:0001911,2.50e-07,4;UBERON:0005333,2.50e-07,4;UBERON:0008425,2.50e-07,4;UBERON:0005311,2.50e-07,4;UBERON:0001004,5.88e-07,74 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,2.79120467188971,1.31064823278103,1.58260186937072,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75826367343678,1.204823675113,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57174890597255,0.728590576585084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73934767846967,1.09098448236334,0.860413786167011,0.853815942907168,0.397589304964456,0.232387885739037,0.310983165046111,0.756962552626885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53650399572076,3.37205259772859,0.301586917234893,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87467667973554,1.84780341018745,1.41775097242386,1.34337784054272,0.581267877027924,1.53353071666084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606255142892519,4.99306318531491,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0.846016147141356,1.40354529212299,0.460404944679482,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,1.14853107599234,0,0,0,0,0,0,0,0,0,0,1.32227932288782,1.34533047155574,1.78657797492418,0.50578890427775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15466535270614,1.34060455107157,2.17781969722645,0,0.43050537267123,1.68471475667626,0.886860307073351,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.67121139316383,0,1.22864280839693,0,0,0,0,0,0,0,0.503865495708552,0,0,0,0.179736702294654,0,0,0,0,0,0,0,0,0,0.262379999988587,0,0.1137934482855,0.254253650292766,0.236387681767936,0,0,0,0,0.120596438625408,0,0.221158519862449,0.295547618953547,0,0,0,0,0,0.46112780877612,0.0897576444097721,0,1.91400695839152,0.366390373607449,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293977192243133,0.69647365264322,0,0,0,0.0730893170861856,0.0821154570532092,0,0,0,0,0,0,0,0,0,0,0.144090417154106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0.137539436597234,0.83088067605837,0,0,0,0.335434687599266,0.0788057072991982,0,0,0,0.575745591958336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0.308801447160972,0,0,0.192914038270915,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,0.139879507719444,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.687034029507179,0.11796972334774,0,0.231051332300676,0,0,0,0,0,0,0.261906694481422,0,0.147856086217045,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0.606965604236632,0.91064876540519,0,0,0,0,0,0.118193840883968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0,0,0,0,0.231522474323834,0,0,0,0.235676547101626,0,0,0,0,0,0,0,0.178553938605658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0.203977659483963,0.534434810531121,0.643264296743914,0,2.72803313585662,6.96706738406064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p5@ELMO3 | |||
}} |
Latest revision as of 10:16, 17 September 2015
Short description: | p5@ELMO3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_ELMO3_5end |
Coexpression cluster: | NA |
Association with transcript: | -242bp_to_BC034410_5end |
EntrezGene: | ELMO3 |
HGNC: | 17289 |
UniProt: | Q96BJ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 1.77e-30 | 13 |
epithelial cell of Malassez | 2.00e-20 | 3 |
duct epithelial cell | 7.90e-20 | 3 |
branched duct epithelial cell | 7.90e-20 | 3 |
tracheal epithelial cell | 7.90e-20 | 3 |
tracheoblast | 7.90e-20 | 3 |
endo-epithelial cell | 1.31e-19 | 42 |
epithelial cell of tracheobronchial tree | 9.46e-18 | 9 |
epithelial cell of lower respiratory tract | 9.46e-18 | 9 |
general ecto-epithelial cell | 2.48e-16 | 14 |
amniotic epithelial cell | 8.60e-14 | 2 |
endodermal cell | 1.39e-13 | 58 |
extraembryonic cell | 7.15e-12 | 19 |
epithelial cell | 3.35e-11 | 253 |
bronchial epithelial cell | 1.26e-09 | 3 |
gingival epithelial cell | 1.94e-09 | 3 |
epithelial cell of esophagus | 1.44e-07 | 1 |
mammary gland epithelial cell | 2.50e-07 | 4 |
epidermal cell | 5.00e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 2.69e-16 | 14 |
membranous layer | 2.69e-16 | 14 |
jaw skeleton | 1.83e-15 | 4 |
splanchnocranium | 1.83e-15 | 4 |
amnion | 7.86e-15 | 7 |
somatic layer of lateral plate mesoderm | 5.32e-13 | 8 |
primary subdivision of cranial skeletal system | 1.77e-12 | 5 |
tracheobronchial tree | 1.39e-10 | 15 |
lower respiratory tract | 1.39e-10 | 15 |
protuberance | 1.75e-10 | 6 |
pharyngeal arch | 1.75e-10 | 6 |
embryonic head | 1.75e-10 | 6 |
lower respiratory tract epithelium | 1.26e-09 | 3 |
epithelium of bronchus | 1.26e-09 | 3 |
gingival epithelium | 1.94e-09 | 3 |
extraembryonic structure | 2.76e-09 | 24 |
trachea | 8.38e-09 | 7 |
respiratory airway | 8.38e-09 | 7 |
mammary gland | 2.50e-07 | 4 |
mammary bud | 2.50e-07 | 4 |
mammary ridge | 2.50e-07 | 4 |
mammary placode | 2.50e-07 | 4 |
respiratory system | 5.88e-07 | 74 |