FFCP PHASE1:Hg19::chr16:66413237..66413255,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1003 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1764 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=30bp_to_uc002eon.1_5end | |||
|cluster_id=chr16:66413237..66413255,+ | |||
|coexpression_cluster_id=C83 | |||
|description=CAGE_peak_7_at_CDH5_5end | |||
|id=chr16:66413237..66413255,+ | |||
|ontology_enrichment_celltype=CL:0002139!2.37e-38!24;CL:0000115!1.85e-33!35;CL:0000071!2.85e-29!18;CL:0002546!2.85e-29!18;CL:0002078!3.24e-25!44;CL:1000413!8.05e-23!9;CL:0000213!1.03e-19!57;CL:0000215!1.03e-19!57;CL:0002544!7.13e-16!6;CL:0002543!1.20e-10!6;CL:0005020!1.39e-10!6;CL:0002138!1.39e-10!6;CL:0005022!1.39e-10!6;CL:0000039!1.29e-09!7;CL:0000586!1.29e-09!7;CL:0000076!8.01e-09!62;CL:0000066!1.22e-08!254;CL:0002618!6.97e-08!3;CL:0000222!5.91e-07!119 | |||
|ontology_enrichment_celltype_v019=CL:0000115;1.53e-27;36!CL:1000413;5.05e-26;9!CL:0000071;5.73e-25;18!CL:0002139;3.94e-24;24!CL:0002078;2.44e-15;45!CL:0002544;8.31e-15;6!CL:0000039;2.97e-13;7!CL:0000586;2.97e-13;7!CL:0000213;1.11e-08;58!CL:0000215;1.11e-08;58!CL:0002188;1.42e-08;5!CL:0002543;2.78e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,4.67e-30,36;CL:1000413,5.77e-26,9;CL:0000071,5.84e-25,18;CL:0002546,5.84e-25,18;CL:0002139,4.75e-24,24;CL:0002078,9.96e-24,45;CL:0000213,4.79e-18,58;CL:0000215,4.79e-18,58;CL:0002544,8.52e-15,6;CL:0000039,2.91e-13,7;CL:0000586,2.91e-13,7;CL:0002188,1.22e-08,5;CL:0000222,8.92e-08,121;CL:0002543,2.61e-07,6;CL:0000066,5.10e-07,253 | |||
|ontology_enrichment_development_v019=CL:0002546;5.73e-25;18!UBERON:0003124;1.05e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;2.79e-11;1!DOID:10165;2.79e-11;1!DOID:1798;2.79e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,2.79e-11,1;DOID:10165,2.79e-11,1;DOID:1798,2.79e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0001986!2.85e-29!18;UBERON:0004638!2.85e-29!18;UBERON:0004852!2.85e-29!18;UBERON:0000487!3.47e-23!22;UBERON:0003915!8.05e-23!9;UBERON:0004700!8.05e-23!9;UBERON:0001917!8.05e-23!9;UBERON:0001737!9.85e-23!9;UBERON:0006914!6.59e-20!25;UBERON:0000055!1.58e-19!69;UBERON:0002049!4.20e-16!79;UBERON:0007798!4.20e-16!79;UBERON:0001981!1.19e-14!60;UBERON:0007500!1.19e-14!60;UBERON:0004537!1.19e-14!60;UBERON:0006965!1.19e-14!60;UBERON:0001557!3.74e-14!19;UBERON:0000477!9.18e-14!286;UBERON:0004872!5.57e-12!84;UBERON:0001009!7.42e-11!113;UBERON:0004535!2.02e-10!110;UBERON:0008947!7.26e-10!38;UBERON:0003258!7.26e-10!38;UBERON:0004111!6.32e-09!241;UBERON:0000947!2.32e-08!21;UBERON:0010191!2.32e-08!21;UBERON:0000065!3.54e-08!53;UBERON:0001473!7.92e-08!8;UBERON:0004536!7.92e-08!8;UBERON:0006558!7.92e-08!8;UBERON:0003914!1.23e-07!118;UBERON:0000025!1.28e-07!194;UBERON:0000072!1.82e-07!46;UBERON:0001637!2.57e-07!42;UBERON:0003509!2.57e-07!42;UBERON:0004572!2.57e-07!42;UBERON:0001638!6.00e-07!9;UBERON:0003920!6.00e-07!9;UBERON:0004582!6.00e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0003915;5.05e-26;9!UBERON:0004700;5.05e-26;9!UBERON:0001917;5.05e-26;9!UBERON:0004638;5.73e-25;18!UBERON:0001986;5.73e-25;18!UBERON:0004852;5.73e-25;18!UBERON:0000487;2.56e-20;22!UBERON:0006914;8.36e-18;25!UBERON:0001737;5.08e-17;9!UBERON:0001557;5.08e-17;9!UBERON:0000490;7.95e-13;33!UBERON:0000055;7.24e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003915,5.77e-26,9;UBERON:0004700,5.77e-26,9;UBERON:0001917,5.77e-26,9;UBERON:0004638,5.84e-25,18;UBERON:0001986,5.84e-25,18;UBERON:0004852,5.84e-25,18;UBERON:0000487,2.60e-20,22;UBERON:0006914,8.49e-18,25;UBERON:0001737,5.09e-17,9;UBERON:0000055,5.08e-10,68;UBERON:0007500,2.58e-09,59;UBERON:0001981,2.58e-09,59;UBERON:0004537,2.58e-09,59;UBERON:0006965,2.58e-09,59;UBERON:0002049,1.41e-08,78;UBERON:0007798,1.41e-08,78;UBERON:0001557,3.59e-08,19;UBERON:0004872,5.14e-08,83 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993812036833525,0.860234595106124,1.38856200643038,1.13061588384802,0.419499436209906,1.10047216776027,1.25396979922086,0.258416759169329,1.06729878806013,0,0,0,0.24406205754817,0.367663080345869,2.43042584364528,0.625098097988558,0.22452937262617,0.337834441449967,1.53316637465883,0,2.01521918323448,0,0,0,0,0.25326102332916,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0.473227200159376,1.18009283054671,0.723033089650446,0.772057809126758,0.653638332277218,0.474541238222193,1.21348177344148,1.17732879075208,2.69323009862473,2.95262181849859,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.721832238805369,0.462985512576611,0.761016608938393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27466768141793,1.87103075804167,0.431831832204279,0,0,0,0,0,0,0,0,0,0,0,0.515205058238611,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564862804660675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.338583555603207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0.709163045303809,0,0,0,0,0,0,0,0,0,0,0,0,0,2.53620294826866,25.7604439456046,5.3237212241784,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.067401132980677,0,0.234264445725339,0,0.391329237864179,0,0.394584402849391,0,0.30607276163049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.458320848023367,0,0.199679000498991,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.106787412567695,0.78602152549833,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.85720083444267,0.163771917510097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24183318227694,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0,0,0,0,0.102662806856247,1.1598144313382,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0.128915775947154,0,0.357107877211315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26721740526556,0.735159196278759,0,0,0,0,0,0,0,0,0,0,0,0.202117188958219,0.217716747896961,0,0,0.143444410785353,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p7@CDH5 | |||
}} |
Latest revision as of 08:12, 17 September 2015
Short description: | p7@CDH5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CDH5_5end |
Coexpression cluster: | C83_choriocarcinoma_pancreatic_placenta_chorionic_HES3GFP_testicular_amniotic |
Association with transcript: | 30bp_to_uc002eon.1_5end |
EntrezGene: | CDH5 |
HGNC: | 1764 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 4.67e-30 | 36 |
endothelial cell of artery | 5.77e-26 | 9 |
blood vessel endothelial cell | 5.84e-25 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.84e-25 | 18 |
endothelial cell of vascular tree | 4.75e-24 | 24 |
meso-epithelial cell | 9.96e-24 | 45 |
lining cell | 4.79e-18 | 58 |
barrier cell | 4.79e-18 | 58 |
aortic endothelial cell | 8.52e-15 | 6 |
germ line cell | 2.91e-13 | 7 |
germ cell | 2.91e-13 | 7 |
glomerular endothelial cell | 1.22e-08 | 5 |
mesodermal cell | 8.92e-08 | 121 |
vein endothelial cell | 2.61e-07 | 6 |
epithelial cell | 5.10e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
endothelial tube | 5.77e-26 | 9 |
arterial system endothelium | 5.77e-26 | 9 |
endothelium of artery | 5.77e-26 | 9 |
blood vessel endothelium | 5.84e-25 | 18 |
endothelium | 5.84e-25 | 18 |
cardiovascular system endothelium | 5.84e-25 | 18 |
simple squamous epithelium | 2.60e-20 | 22 |
squamous epithelium | 8.49e-18 | 25 |
larynx | 5.09e-17 | 9 |
vessel | 5.08e-10 | 68 |
epithelial tube open at both ends | 2.58e-09 | 59 |
blood vessel | 2.58e-09 | 59 |
blood vasculature | 2.58e-09 | 59 |
vascular cord | 2.58e-09 | 59 |
vasculature | 1.41e-08 | 78 |
vascular system | 1.41e-08 | 78 |
upper respiratory tract | 3.59e-08 | 19 |
splanchnic layer of lateral plate mesoderm | 5.14e-08 | 83 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 2.79e-11 | 1 |
endocrine pancreas cancer | 2.79e-11 | 1 |
pancreatic endocrine carcinoma | 2.79e-11 | 1 |