FFCP PHASE1:Hg19::chr16:6069299..6069316,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54715 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18222 | |||
|TSSclassifier=strong | |||
|UniProt=Q59HD3,Q9NWB1 | |||
|association_with_transcript=167bp_to_ENST00000550418,ENST00000553186,NM_001142333,NM_018723,uc002cyr.1,uc002cys.2,uc002cyt.2,uc010buf.1_5end | |||
|cluster_id=chr16:6069299..6069316,+ | |||
|coexpression_cluster_id=C118 | |||
|description=CAGE_peak_18_at_RBFOX1_5end | |||
|id=chr16:6069299..6069316,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;9.61e-19;3!UBERON:0006601;5.09e-16;82!UBERON:0010122;3.91e-12;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.14e-87!57;UBERON:0005068!4.14e-87!57;UBERON:0006241!4.14e-87!57;UBERON:0007135!4.14e-87!57;UBERON:0001017!3.08e-81!82;UBERON:0000073!1.71e-80!94;UBERON:0001016!1.71e-80!94;UBERON:0005743!4.33e-80!86;UBERON:0002616!4.33e-76!59;UBERON:0002780!5.85e-72!41;UBERON:0001890!5.85e-72!41;UBERON:0006240!5.85e-72!41;UBERON:0003080!4.69e-70!42;UBERON:0000955!2.98e-69!69;UBERON:0006238!2.98e-69!69;UBERON:0001893!2.22e-68!34;UBERON:0001869!3.13e-68!32;UBERON:0002020!5.37e-68!34;UBERON:0003528!5.37e-68!34;UBERON:0002791!1.59e-65!33;UBERON:0003075!3.94e-65!86;UBERON:0007284!3.94e-65!86;UBERON:0002346!1.93e-64!90;UBERON:0002619!2.66e-57!22;UBERON:0000956!2.39e-54!25;UBERON:0000203!2.39e-54!25;UBERON:0001950!3.63e-52!20;UBERON:0003056!2.49e-51!61;UBERON:0007023!5.80e-46!115;UBERON:0000924!4.46e-43!173;UBERON:0006601!4.46e-43!173;UBERON:0004121!1.12e-42!169;UBERON:0000033!1.14e-41!123;UBERON:0000153!3.58e-39!129;UBERON:0007811!3.58e-39!129;UBERON:0000025!1.21e-19!194;UBERON:0000200!1.38e-17!6;UBERON:0003076!1.39e-17!15;UBERON:0003057!1.39e-17!15;UBERON:0001871!1.88e-17!7;UBERON:0002420!2.99e-15!9;UBERON:0007245!2.99e-15!9;UBERON:0010009!2.99e-15!9;UBERON:0010011!2.99e-15!9;UBERON:0000454!2.99e-15!9;UBERON:0002021!3.19e-15!5;UBERON:0002308!5.95e-15!9;UBERON:0000125!5.95e-15!9;UBERON:0001872!7.11e-15!5;UBERON:0004733!9.06e-15!12;UBERON:0002028!9.06e-15!12;UBERON:0007277!9.06e-15!12;UBERON:0000349!1.09e-14!5;UBERON:0004111!2.24e-14!241;UBERON:0004732!1.63e-13!13;UBERON:0000369!1.43e-12!4;UBERON:0002435!1.43e-12!4;UBERON:0000204!1.43e-12!4;UBERON:0010082!1.43e-12!4;UBERON:0000477!8.51e-12!286;UBERON:0002680!1.18e-11!9;UBERON:0001895!1.18e-11!9;UBERON:0010092!1.18e-11!9;UBERON:0000483!2.02e-11!309;UBERON:0000119!3.40e-11!312;UBERON:0000475!6.98e-11!365;UBERON:0009663!1.77e-10!7;UBERON:0000064!4.56e-10!219;UBERON:0005383!1.04e-09!3;UBERON:0005382!1.04e-09!3;UBERON:0002771!1.23e-09!3;UBERON:0000988!3.15e-09!3;UBERON:0002298!8.79e-09!8;UBERON:0001870!6.23e-07!2;UBERON:0001873!6.23e-07!2;UBERON:0010122!6.23e-07!2;UBERON:0001876!8.55e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;6.97e-75;32!UBERON:0002619;1.60e-74;22!UBERON:0001950;4.05e-73;20!UBERON:0001893;1.34e-70;34!UBERON:0002791;7.14e-69;32!UBERON:0003528;4.19e-68;34!UBERON:0002020;4.19e-68;34!UBERON:0000956;1.76e-65;25!UBERON:0000203;1.76e-65;25!UBERON:0002780;5.02e-48;41!UBERON:0001890;5.02e-48;41!UBERON:0000073;1.04e-47;53!UBERON:0002616;1.04e-47;53!UBERON:0000955;6.87e-34;68!UBERON:0001017;1.68e-32;75!UBERON:0002021;4.53e-28;5!UBERON:0001016;3.64e-26;83!UBERON:0000200;2.26e-23;6!UBERON:0000369;4.45e-23;4!UBERON:0002435;4.45e-23;4!UBERON:0000204;4.45e-23;4!UBERON:0004733;1.90e-22;12!UBERON:0002028;1.90e-22;12!UBERON:0004732;1.18e-20;13!UBERON:0001871;2.36e-19;6!UBERON:0001872;2.44e-18;5!UBERON:0005383;1.65e-17;3!UBERON:0005382;1.65e-17;3!UBERON:0002680;4.47e-16;9!UBERON:0001895;4.47e-16;9!UBERON:0002420;1.59e-15;9!UBERON:0000125;1.59e-15;9!UBERON:0007245;1.59e-15;9!UBERON:0002308;1.59e-15;9!UBERON:0010009;1.59e-15;9!UBERON:0010011;1.59e-15;9!UBERON:0000454;1.59e-15;9!UBERON:0002298;7.82e-15;6!UBERON:0007023;8.35e-14;114!UBERON:0009663;2.90e-13;7!UBERON:0001873;3.91e-12;2!UBERON:0002771;9.04e-12;2!UBERON:0011216;3.50e-11;132!UBERON:0000349;1.27e-10;5!UBERON:0002037;1.31e-09;6!UBERON:0001870;1.28e-08;3!UBERON:0000988;2.24e-08;3!UBERON:0001896;3.90e-08;3!UBERON:0005290;3.90e-08;3!UBERON:0010314;1.31e-07;132!UBERON:0002902;2.65e-07;1!UBERON:0001882;2.65e-07;1!UBERON:0009899;2.65e-07;1!UBERON:0007190;2.65e-07;1!UBERON:0005403;2.65e-07;1!UBERON:0002581;4.37e-07;1!UBERON:0002022;4.37e-07;1!UBERON:0001874;4.37e-07;1!UBERON:0003112;4.37e-07;1!UBERON:0011158;4.37e-07;1!UBERON:0003128;4.37e-07;1!UBERON:0001703;4.37e-07;1!UBERON:0002241;4.37e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.55e-94,53;UBERON:0002616,2.55e-94,53;UBERON:0001049,4.73e-89,56;UBERON:0005068,4.73e-89,56;UBERON:0006241,4.73e-89,56;UBERON:0007135,4.73e-89,56;UBERON:0001869,2.27e-85,32;UBERON:0001893,3.24e-80,34;UBERON:0003528,8.53e-80,34;UBERON:0002020,8.53e-80,34;UBERON:0002791,1.09e-77,32;UBERON:0000955,2.07e-76,68;UBERON:0006238,2.07e-76,68;UBERON:0002619,3.88e-75,22;UBERON:0001950,1.20e-73,20;UBERON:0001017,4.46e-72,81;UBERON:0002780,5.55e-72,41;UBERON:0001890,5.55e-72,41;UBERON:0003080,5.55e-72,41;UBERON:0006240,5.55e-72,41;UBERON:0000956,5.04e-66,25;UBERON:0000203,5.04e-66,25;UBERON:0001016,1.93e-64,89;UBERON:0003075,2.47e-59,82;UBERON:0007284,2.47e-59,82;UBERON:0002346,2.45e-56,86;UBERON:0003056,3.88e-47,61;UBERON:0010371,1.14e-45,104;UBERON:0007023,1.96e-41,114;UBERON:0010314,2.12e-37,132;UBERON:0004121,3.35e-31,171;UBERON:0000924,3.35e-31,171;UBERON:0006601,3.35e-31,171;UBERON:0002021,3.85e-28,5;UBERON:0011216,7.25e-26,223;UBERON:0000200,2.38e-23,6;UBERON:0000369,5.76e-23,4;UBERON:0002435,5.76e-23,4;UBERON:0000204,5.76e-23,4;UBERON:0010082,5.76e-23,4;UBERON:0004733,2.24e-22,12;UBERON:0002028,2.24e-22,12;UBERON:0007277,2.24e-22,12;UBERON:0000025,4.13e-22,192;UBERON:0004732,1.37e-20,13;UBERON:0001871,1.06e-19,6;UBERON:0001872,2.34e-18,5;UBERON:0003076,9.96e-18,15;UBERON:0003057,9.96e-18,15;UBERON:0005383,2.14e-17,3;UBERON:0005382,2.14e-17,3;UBERON:0004111,1.72e-16,240;UBERON:0002680,4.34e-16,9;UBERON:0001895,4.34e-16,9;UBERON:0010092,4.34e-16,9;UBERON:0002420,1.45e-15,9;UBERON:0007245,1.45e-15,9;UBERON:0010009,1.45e-15,9;UBERON:0010011,1.45e-15,9;UBERON:0000454,1.45e-15,9;UBERON:0000125,2.03e-15,9;UBERON:0002308,2.03e-15,9;UBERON:0002298,9.41e-15,6;UBERON:0009663,3.35e-13,7;UBERON:0001873,5.19e-12,2;UBERON:0010122,5.19e-12,2;UBERON:0002771,5.81e-12,2;UBERON:0000483,1.28e-11,306;UBERON:0000119,1.90e-11,309;UBERON:0000349,8.29e-11,5;UBERON:0002037,1.31e-09,6;UBERON:0006215,1.31e-09,6;UBERON:0001870,1.14e-08,3;UBERON:0000988,2.16e-08,3;UBERON:0001896,4.86e-08,3;UBERON:0005290,4.86e-08,3;UBERON:0010096,4.86e-08,3;UBERON:0002902,2.50e-07,1;UBERON:0009899,2.50e-07,1;UBERON:0001882,2.66e-07,1;UBERON:0005403,2.66e-07,1;UBERON:0007190,2.82e-07,1;UBERON:0001874,4.25e-07,1;UBERON:0002022,4.51e-07,1;UBERON:0002581,5.69e-07,1;UBERON:0003112,6.02e-07,1;UBERON:0011158,6.02e-07,1;UBERON:0003128,6.02e-07,1;UBERON:0001703,6.02e-07,1;UBERON:0002241,6.02e-07,1;UBERON:0004761,6.02e-07,1;UBERON:0009617,6.02e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18611685633159,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0.116193942869518,0.414644220061482,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9882952955326,0.984685914873589,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0.969332746095218,2.13366625772258,0,0,0,0,0,0,0,0,0,0,2.65722415744152,1.08536794762867,9.15490417902499,4.42317039724898,8.57088094965288,1.09692698576986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471807930864739,0,1.1713222286267,0,0,0,0,0,1.53036380815245,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.78567502205866,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,1.59045937961861,0.817220436669454,0,0,0,0,0,2.49073182297901,0,0.0788057072991982,0.157363764404994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.16354660725395,0.26446520348538,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0.886068179966986,1.95242023843141,2.3786276834235,0,1.10929051536852,1.30402446176905,0,0,0,0,0,0.468334905806882,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383683113910955,0.970423302570136,0,0.327628914576042,0,0,0,0,0,0,0,0,0,3.14723202972652,1.41696576325585,1.11743701340006,2.46139637088906,2.7727886584389,3.38870537074668,2.26065903884592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10672889244615,1.56215619722769,2.68692835451539,2.40980078736846,0.546974809018219,0,0,0.175871244359621,0,0.535701835878287,0,0,0,0,0,0,2.71878931907327,2.36781984826257,0,0,0,2.51384943865603,0,0,0,0,0.285906176706625,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0.8453114551668,0,0,0,0,0,0,0,0,0,0,0,2.51568513706384,1.30905207102113,0,0,0,0,0,0,0,0.101988829741982,0,0,0,0,0,0.829169439458779,0.310298987585686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p18@RBFOX1 | |||
}} |
Latest revision as of 06:54, 17 September 2015
Short description: | p18@RBFOX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_RBFOX1_5end |
Coexpression cluster: | C118_cerebellum_parietal_occipital_medial_middle_frontal_insula |
Association with transcript: | 167bp_to_ENST00000550418, ENST00000553186, NM_001142333, NM_018723, uc002cyr.1, uc002cys.2, uc002cyt.2, uc010buf.1_5end |
EntrezGene: | RBFOX1 |
HGNC: | 18222 |
UniProt: | Q59HD3Q9NWB1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data