FFCP PHASE1:Hg19::chr16:57662566..57662582,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9289 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4512 | |||
|TSSclassifier=strong | |||
|UniProt=Q9Y653,B3KQV4,B4DR54 | |||
|association_with_transcript=147bp_to_ENST00000388812,ENST00000388813,ENST00000456916,ENST00000538815,NM_001145771,NM_001145772,NM_001145773,NM_201524,NM_201525,uc002emd.2,uc002eme.2,uc002emf.2,uc010vhs.1,uc010vht.1_5end | |||
|cluster_id=chr16:57662566..57662582,+ | |||
|coexpression_cluster_id=C2380 | |||
|description=CAGE_peak_6_at_GPR56_5end | |||
|id=chr16:57662566..57662582,+ | |||
|ontology_enrichment_celltype=CL:0002139!2.75e-15!24;CL:0000115!3.87e-13!35;CL:0000071!1.38e-11!18;CL:0002546!1.38e-11!18;CL:0002078!4.87e-11!44;CL:0000213!1.37e-08!57;CL:0000215!1.37e-08!57;CL:1000413!9.52e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0002139;4.63e-18;24!CL:0000115;1.14e-14;36!CL:0000071;1.23e-13;18!CL:0002078;9.71e-10;45!CL:1000413;8.19e-08;9!CL:0000213;2.94e-07;58!CL:0000215;2.94e-07;58!CL:1000449;4.04e-07;15!CL:1000497;4.76e-07;17!CL:0002518;4.76e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,5.21e-18,24;CL:0000115,2.02e-17,36;CL:0002078,3.51e-15,45;CL:0000071,1.43e-13,18;CL:0002546,1.43e-13,18;CL:0000213,3.34e-11,58;CL:0000215,3.34e-11,58;CL:1000413,8.79e-08,9;CL:1000449,3.68e-07,15;CL:1000497,4.35e-07,17;CL:0002518,4.35e-07,17 | |||
|ontology_enrichment_development_v019=CL:0002546;1.23e-13;18!UBERON:0006601;8.87e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.58e-32!115;UBERON:0005743!1.34e-22!86;UBERON:0003075!6.10e-22!86;UBERON:0007284!6.10e-22!86;UBERON:0001017!1.14e-21!82;UBERON:0001049!1.32e-21!57;UBERON:0005068!1.32e-21!57;UBERON:0006241!1.32e-21!57;UBERON:0007135!1.32e-21!57;UBERON:0000955!7.41e-20!69;UBERON:0006238!7.41e-20!69;UBERON:0002616!2.31e-19!59;UBERON:0002346!4.64e-19!90;UBERON:0000073!1.25e-18!94;UBERON:0001016!1.25e-18!94;UBERON:0000477!1.68e-17!286;UBERON:0000033!1.97e-17!123;UBERON:0000153!7.54e-17!129;UBERON:0007811!7.54e-17!129;UBERON:0004111!2.20e-16!241;UBERON:0003080!3.48e-16!42;UBERON:0000025!6.79e-16!194;UBERON:0002780!8.30e-16!41;UBERON:0001890!8.30e-16!41;UBERON:0006240!8.30e-16!41;UBERON:0003056!1.19e-15!61;UBERON:0002020!1.49e-13!34;UBERON:0003528!1.49e-13!34;UBERON:0004121!1.96e-13!169;UBERON:0001893!2.46e-13!34;UBERON:0002791!6.98e-13!33;UBERON:0000119!8.19e-13!312;UBERON:0000483!2.07e-12!309;UBERON:0001869!2.47e-12!32;UBERON:0000924!5.36e-12!173;UBERON:0006601!5.36e-12!173;UBERON:0001986!1.38e-11!18;UBERON:0004638!1.38e-11!18;UBERON:0004852!1.38e-11!18;UBERON:0000956!9.67e-09!25;UBERON:0000203!9.67e-09!25;UBERON:0002619!3.75e-08!22;UBERON:0000487!7.56e-08!22;UBERON:0001950!4.01e-07!20;UBERON:0000467!4.87e-07!625;UBERON:0000480!7.36e-07!626;UBERON:0003915!9.52e-07!9;UBERON:0004700!9.52e-07!9;UBERON:0001917!9.52e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.23e-13;18!UBERON:0001986;1.23e-13;18!UBERON:0004852;1.23e-13;18!UBERON:0001893;1.38e-13;34!UBERON:0003528;1.89e-13;34!UBERON:0002020;1.89e-13;34!UBERON:0000073;3.32e-13;53!UBERON:0002616;3.32e-13;53!UBERON:0002780;4.90e-13;41!UBERON:0001890;4.90e-13;41!UBERON:0002791;6.12e-13;32!UBERON:0001869;7.75e-13;32!UBERON:0001017;3.64e-11;75!UBERON:0000955;3.83e-10;68!UBERON:0000956;6.40e-10;25!UBERON:0000203;6.40e-10;25!UBERON:0000487;1.43e-09;22!UBERON:0002619;2.77e-09;22!UBERON:0007023;3.14e-09;114!UBERON:0001016;3.19e-08;83!UBERON:0001950;4.58e-08;20!UBERON:0003915;8.19e-08;9!UBERON:0004700;8.19e-08;9!UBERON:0001917;8.19e-08;9!UBERON:0000125;1.11e-07;9!UBERON:0002308;1.11e-07;9!UBERON:0002420;1.18e-07;9!UBERON:0007245;1.18e-07;9!UBERON:0010009;1.18e-07;9!UBERON:0010011;1.18e-07;9!UBERON:0000454;1.18e-07;9!UBERON:0006914;1.79e-07;25!UBERON:0000489;2.08e-07;29!UBERON:0006555;4.04e-07;15!UBERON:0004819;4.04e-07;15!UBERON:0001285;4.04e-07;15!UBERON:0007684;4.04e-07;15!UBERON:0006554;5.31e-07;30!UBERON:0001008;5.31e-07;30 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.50e-32,114;UBERON:0001017,3.53e-25,81;UBERON:0001049,3.24e-24,56;UBERON:0005068,3.24e-24,56;UBERON:0006241,3.24e-24,56;UBERON:0007135,3.24e-24,56;UBERON:0003075,9.12e-24,82;UBERON:0007284,9.12e-24,82;UBERON:0000073,2.10e-22,53;UBERON:0002616,2.10e-22,53;UBERON:0000955,3.21e-22,68;UBERON:0006238,3.21e-22,68;UBERON:0002346,2.48e-21,86;UBERON:0001016,1.27e-20,89;UBERON:0002780,2.35e-18,41;UBERON:0001890,2.35e-18,41;UBERON:0003080,2.35e-18,41;UBERON:0006240,2.35e-18,41;UBERON:0010371,5.06e-18,104;UBERON:0003056,2.22e-17,61;UBERON:0000025,6.56e-17,192;UBERON:0004111,6.53e-16,240;UBERON:0010314,7.46e-16,132;UBERON:0003528,1.19e-15,34;UBERON:0002020,1.19e-15,34;UBERON:0001893,2.15e-15,34;UBERON:0002791,2.71e-14,32;UBERON:0001869,3.37e-14,32;UBERON:0004638,1.43e-13,18;UBERON:0001986,1.43e-13,18;UBERON:0004852,1.43e-13,18;UBERON:0004121,3.85e-13,171;UBERON:0000924,3.85e-13,171;UBERON:0006601,3.85e-13,171;UBERON:0000119,5.26e-12,309;UBERON:0000483,8.46e-12,306;UBERON:0000956,6.46e-10,25;UBERON:0000203,6.46e-10,25;UBERON:0000487,1.58e-09,22;UBERON:0002619,3.30e-09,22;UBERON:0000489,4.19e-08,31;UBERON:0001950,5.49e-08,20;UBERON:0003915,8.79e-08,9;UBERON:0004700,8.79e-08,9;UBERON:0001917,8.79e-08,9;UBERON:0000125,1.16e-07,9;UBERON:0002308,1.16e-07,9;UBERON:0002420,1.17e-07,9;UBERON:0007245,1.17e-07,9;UBERON:0010009,1.17e-07,9;UBERON:0010011,1.17e-07,9;UBERON:0000454,1.17e-07,9;UBERON:0006555,1.73e-07,16;UBERON:0004819,1.73e-07,16;UBERON:0006914,1.94e-07,25;UBERON:0002049,3.58e-07,78;UBERON:0007798,3.58e-07,78;UBERON:0004211,3.68e-07,15;UBERON:0009773,3.68e-07,15;UBERON:0001231,3.68e-07,15;UBERON:0001285,3.68e-07,15;UBERON:0007684,3.68e-07,15;UBERON:0004208,3.68e-07,15;UBERON:0003076,4.48e-07,15;UBERON:0003057,4.48e-07,15;UBERON:0002113,6.10e-07,26;UBERON:0003918,6.10e-07,26;UBERON:0011143,6.10e-07,26;UBERON:0005095,6.10e-07,26;UBERON:0007687,6.10e-07,26 | |||
|phase1_expression=0,0,0,0,0.446961094427288,0.872338524100369,0,1.26343974685366,0,0,0,0,0,3.58922423584135,2.31978163009541,0,0,0,0.487932798790507,2.70866327768933,0.816002764977012,1.88072832886853,4.57977579409691,3.69560947696787,1.63205431473244,0,0,0,0.393364276848904,4.98978217526377,0.154816123316076,0,0.6024118375565,0.739508020333575,0,0,6.45920966536664,1.10799081706375,3.00816671205213,0.217010870715852,0,0,0,0.581592955118259,0.377875943688809,0.485168122375632,0,2.05583944010913,0.619412741790207,0,0.768482119587302,0,0,0.645484683583826,0,1.31769637679823,2.72906150057846,0.674170453335254,0.306083892370903,2.88836124368484,1.27867425159808,0.329851300186716,0.199463657621632,0,0.870627715885752,1.70215567407342,1.24564449799115,0.251248665256743,0,0,0.605399502633369,0.736555271975129,1.58231193720442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.28685314316103,6.72610275577843,8.16490662802739,0.196709770113833,0.393010762749165,0,0,0,0,0,1.44833593950726,0,0,0,0.640456598628376,0.130059347559878,0.328875809207352,0,0,0,0,0,0.679856056185397,0.766440987203842,0.68725489096526,1.26509846009751,1.27426165729639,1.30216690771284,0.950452044448374,2.55977702432214,3.58362511232371,2.49861453104692,1.4206635122641,1.64225599384209,2.82249440514625,2.40696176205157,4.05508330871837,0,0.670700859703636,0.12786256184353,0.361439152384566,1.00267582127178,0.579386075843295,1.5905718941022,0.973269740605272,1.79616152611729,1.55210578223795,1.40535657109002,11.0677318795567,0.728590576585084,0.370784442784429,0,0,0,0,0,0,10.5344075904354,12.0432843314857,19.7870085916329,26.5694732704285,13.8434813949269,20.0836170616249,13.1666828918191,27.1337597127795,29.5285998029969,19.7485161531155,20.1414658554573,11.4040815857777,7.56592378399325,18.0154909369476,14.5825550618717,12.6805614163393,13.4717623575702,16.1034417091151,15.3316637465883,25.6301728083395,9.16008719652036,0,0,5.66922267785295,0,0.379891534993739,0,2.0078563452417,1.77334191099179,1.12135520028461,0,0.24666754841716,0.311211035399766,0.538842688278752,0.980771418680752,1.66493170409425,10.37116664064,0,1.87296046098192,1.71141546463335,0.448346041655403,0.23486899728753,0,0,3.47062091133319,0.122834317311768,2.27316718586684,0,0.247266929278557,0.910161361938026,0,2.69337782326506,2.12701483782339,1.10825646193673,0,0.30648779579902,0.150238058906597,0.340296549480063,0,0,0,0.600182192168805,0.103052529238439,0,0.18611685633159,2.02531598689519,0.0974370051611986,0,0,0,0.355009592516614,0,0.508681776931463,0.773043412653187,0.272746120590835,0,0,0,0.348581828608555,1.34759371519982,0.252320850875628,0,0,1.28648187638577,1.38134921352481,0,0.721879481669586,1.65629520055781,1.18009283054671,1.20505514941741,1.32352767278873,0.871517776369625,0.71181185733329,1.8876383142423,1.76599318612811,0,33.2169954581092,5.60967095213783,0.4115740113314,1.47008711385542,0,0,1.77236972004421,0,0,2.74508496477641,2.08525542276389,3.37205259772859,0.100528972411631,0.740707561268237,0,2.07986957055916,1.44331342025273,5.56465943880369,0.587043471179108,16.7465079402846,18.5194205030644,10.6542325251375,0,0,0,0,0,0.93733833986777,0.16798212819886,0,1.07470227243418,0,0,0,0,0.621984346622316,0.576479813667846,0.12624243342638,27.1136008627562,29.7950971935457,65.6417704376263,10.2643467613623,18.9202586574115,8.40960561962969,56.5936336608545,2.35475277125258,0.87192013766656,3.59357600522655,0,0,0,0.797814349754612,1.04007436911366,0.257207374262142,0,0.532844358032199,0.57191197463259,0,0,0.65147236858747,0,0,0.602878754119172,0,0.299918973546171,0,0,0,1.4377491329495,2.29723871668228,2.85273810081437,1.44781306667579,0.205476322550383,1.07436577943937,0,2.56139988262505,3.88129634747131,3.33691894327346,41.671518372484,11.712586847186,3.86644406388848,4.52293916402742,2.55175500661265,0,0,0.828831026872071,2.69921281782108,5.00170521059677,0,0.415941723061614,2.14114786556594,0.315404830067869,0.117141414992713,0,0,0,0.664225598535437,0.737476674166813,0.260650843404249,3.32861967686659,5.49029478097369,0.82707210449155,1.07857100409308,2.13455115606889,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0.160853921143607,0,0,0.355123450626254,3.94210348866284,0.519254429183621,3.48631135379878,0.120859449591622,1.20303882181971,0,0.229628896329213,0.364182336013434,0.131124414959424,5.41439535488894,2.77255213575893,4.70609861506113,5.84556898613043,4.53872004239366,52.3173566726124,37.930896276663,2.37507507712353,18.5072703228347,5.68987518842091,17.5591420849199,5.3524017339458,4.15538004464362,7.16399215110971,0.657779629937804,0.784306353074702,4.35965212697862,1.31205858279882,2.92840555197873,1.44257416306811,0.640986253728404,0.41254749960294,0.574265537996172,0,0,3.28680442193215,0.616194468458578,1.07452572308291,0.689182862422653,0.429680979473094,0.580066775656914,1.70453254832202,3.82837753280971,0.165284915360978,0,0.127612712494584,0.2023155617111,1.39453664789186,0.94443704049192,0,0.616067160352178,1.59691809095107,0,2.22389062924704,0.28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| |||
|short_description=p6@GPR56 | |||
}} |
Latest revision as of 04:13, 17 September 2015
Short description: | p6@GPR56 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_GPR56_5end |
Coexpression cluster: | C2380_Melanocyte_mesothelioma_Renal_Neural_renal_Endothelial_Hepatic |
Association with transcript: | 147bp_to_ENST00000388812, ENST00000388813, ENST00000456916, ENST00000538815, NM_001145771, NM_001145772, NM_001145773, NM_201524, NM_201525, uc002emd.2, uc002eme.2, uc002emf.2, uc010vhs.1, uc010vht.1_5end |
EntrezGene: | GPR56 |
HGNC: | 4512 |
UniProt: | Q9Y653B3KQV4B4DR54 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 5.21e-18 | 24 |
endothelial cell | 2.02e-17 | 36 |
meso-epithelial cell | 3.51e-15 | 45 |
blood vessel endothelial cell | 1.43e-13 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.43e-13 | 18 |
lining cell | 3.34e-11 | 58 |
barrier cell | 3.34e-11 | 58 |
endothelial cell of artery | 8.79e-08 | 9 |
epithelial cell of nephron | 3.68e-07 | 15 |
kidney cell | 4.35e-07 | 17 |
kidney epithelial cell | 4.35e-07 | 17 |