FFCP PHASE1:Hg19::chr16:28304305..28304313,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=388228 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17699 | |||
|TSSclassifier=strong | |||
|UniProt=Q52WX2 | |||
|association_with_transcript=465bp_to_ENST00000341901,NM_001024401,uc002dpd.2_5end | |||
|cluster_id=chr16:28304305..28304313,+ | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_6_at_SBK1_5end | |||
|id=chr16:28304305..28304313,+ | |||
|ontology_enrichment_celltype=CL:0000047!9.96e-18!8;CL:0002319!8.71e-13!25;CL:0000540!1.21e-12!6;CL:0000031!1.21e-12!6;CL:0000404!1.21e-12!6;CL:0000133!1.38e-11!59;CL:0002322!1.78e-09!5;CL:0000221!6.68e-09!71;CL:0000623!1.27e-08!3;CL:0000825!1.27e-08!3;CL:0000242!8.36e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000540;2.66e-37;6!CL:0000404;2.66e-37;6!CL:0002319;4.76e-15;25!CL:0000047;8.82e-14;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,2.19e-49,8;CL:0000540,2.50e-37,6;CL:0000031,2.50e-37,6;CL:0000404,2.50e-37,6;CL:0002319,4.59e-15,25;CL:0000133,6.78e-07,59 | |||
|ontology_enrichment_development_v019=CL:0000031;2.66e-37;6 | |||
|ontology_enrichment_disease=DOID:3095!3.22e-12!22;DOID:2994!3.22e-12!22;DOID:171!7.49e-12!10;DOID:5409!2.64e-10!4;DOID:169!4.71e-07!6 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!6.78e-16!94;UBERON:0001016!6.78e-16!94;UBERON:0001017!7.37e-14!82;UBERON:0001950!3.49e-13!20;UBERON:0005743!6.26e-13!86;UBERON:0000956!3.03e-12!25;UBERON:0000203!3.03e-12!25;UBERON:0002619!8.00e-12!22;UBERON:0002370!9.65e-11!4;UBERON:0005058!9.65e-11!4;UBERON:0009113!9.65e-11!4;UBERON:0003295!9.65e-11!4;UBERON:0005562!9.65e-11!4;UBERON:0000924!1.46e-10!173;UBERON:0006601!1.46e-10!173;UBERON:0001869!4.51e-09!32;UBERON:0002791!9.96e-09!33;UBERON:0004121!1.25e-08!169;UBERON:0000013!1.83e-08!5;UBERON:0002410!1.83e-08!5;UBERON:0002020!2.10e-08!34;UBERON:0003528!2.10e-08!34;UBERON:0001893!2.10e-08!34;UBERON:0001049!5.86e-08!57;UBERON:0005068!5.86e-08!57;UBERON:0006241!5.86e-08!57;UBERON:0007135!5.86e-08!57;UBERON:0002780!7.66e-08!41;UBERON:0001890!7.66e-08!41;UBERON:0006240!7.66e-08!41;UBERON:0000955!9.75e-08!69;UBERON:0006238!9.75e-08!69;UBERON:0003080!1.36e-07!42;UBERON:0002616!1.43e-07!59;UBERON:0003351!3.66e-07!6 | |||
|ontology_enrichment_uberon_v019=UBERON:0002114;1.24e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.14e-11,81;UBERON:0001016,8.14e-10,89;UBERON:0002114,1.30e-09,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0.145398238779565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0.267540828089713,0,0,0.383220493601921,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0.731842236777572,0.927708378250397,0.464775771478074,0.207322110030741,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224170287987055,0.394061520403854,0.215627574859517,0.128343036279748,0.254094624222463,2.60279707715243,1.54657762555539,0,1.91381625495949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0.142283686696828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0.211125408127993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0,0,0.331737779793674,0.591095237907095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61214552326098,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12527203925513,0.825236619583403,0.83088067605837,0,0,0,0,0,0,0,0,0,0,0,0.5085370753095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0.886068179966986,0.122026264901963,0,0,0,0,0.830091809617385,0,0,0,0,0.468334905806882,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255788742607303,0.107824811396682,0.314531883711793,0.109209638192014,0,0.425149840203366,0.123935764259002,0,0,0,0,0,0,0,0,0,0.82046545696302,4.03314713954749,0.138314504928436,0,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0.0634158101939068,4.37579847214576,0,0,0.175871244359621,0,0,0,0,0.227662191351298,0,0,0,0.135939465953663,0.131545547125698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198950775161368,0.118920090777569,0.11294608203896,0.219881033490858,0.150962843566674,0,0,1.41095188908457,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.18175345170189,0.5290268405154,0,0,0,0,0,0,0.203977659483963,0.801652215796681,0.18378979906969,0.250707539292375,0,0,0,0,0,0,0.0645889098360061,0.186224142887574,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0.122241444182866,0,0,0,0 | |||
|short_description=p6@SBK1 | |||
}} |
Latest revision as of 23:44, 15 September 2015
Short description: | p6@SBK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SBK1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 465bp_to_ENST00000341901, NM_001024401, uc002dpd.2_5end |
EntrezGene: | SBK1 |
HGNC: | 17699 |
UniProt: | Q52WX2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 2.19e-49 | 8 |
neuron | 2.50e-37 | 6 |
neuroblast | 2.50e-37 | 6 |
electrically signaling cell | 2.50e-37 | 6 |
neural cell | 4.59e-15 | 25 |
neurectodermal cell | 6.78e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 7.14e-11 | 81 |
nervous system | 8.14e-10 | 89 |
duodenum | 1.30e-09 | 2 |