FFCP PHASE1:Hg19::chr15:96869292..96869320,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7026 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7976 | |||
|TSSclassifier=strong | |||
|UniProt=Q3KQR7 | |||
|association_with_transcript=125bp_to_ENST00000421109_5end | |||
|cluster_id=chr15:96869292..96869320,+ | |||
|coexpression_cluster_id=C1417 | |||
|description=CAGE_peak_15_at_NR2F2_5end | |||
|id=chr15:96869292..96869320,+ | |||
|ontology_enrichment_celltype=CL:0000183!2.15e-11!59;CL:0000222!4.84e-11!119;CL:0000055!1.84e-10!180;CL:0000187!8.97e-10!54;CL:0000192!3.78e-09!42;CL:0000514!3.78e-09!42;CL:0000680!9.25e-09!57;CL:0000056!9.25e-09!57;CL:0000355!9.25e-09!57;CL:0000057!1.75e-08!75;CL:0000359!1.12e-07!32;CL:0000393!5.79e-07!60;CL:0000211!5.79e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0000349;6.85e-10;19!CL:0000359;1.01e-07;32!CL:0002539;2.98e-07;10!CL:0002334;9.66e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,4.44e-10,19;CL:0000222,7.10e-09,121;CL:0000192,3.46e-08,43;CL:0000514,3.46e-08,43;CL:0000187,6.16e-08,55;CL:0000359,7.38e-08,32;CL:0002539,2.25e-07,10;CL:0000680,5.57e-07,58;CL:0000056,5.57e-07,58;CL:0000355,5.57e-07,58;CL:0002334,6.63e-07,12 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002100!7.46e-14!216;UBERON:0000475!1.05e-13!365;UBERON:0000481!1.65e-12!347;UBERON:0000119!1.62e-11!312;UBERON:0002049!6.62e-11!79;UBERON:0007798!6.62e-11!79;UBERON:0000483!9.07e-11!309;UBERON:0004872!1.05e-10!84;UBERON:0004923!1.68e-10!57;UBERON:0005256!1.80e-10!143;UBERON:0000490!2.51e-10!138;UBERON:0003914!8.95e-10!118;UBERON:0000468!1.49e-09!659;UBERON:0003104!2.89e-09!238;UBERON:0009142!2.89e-09!238;UBERON:0000486!1.10e-08!82;UBERON:0001981!1.79e-08!60;UBERON:0007500!1.79e-08!60;UBERON:0004537!1.79e-08!60;UBERON:0006965!1.79e-08!60;UBERON:0004111!2.00e-08!241;UBERON:0000055!2.06e-08!69;UBERON:0005156!3.24e-08!59;UBERON:0000990!3.24e-08!59;UBERON:0003886!3.38e-08!63;UBERON:0000477!4.63e-08!286;UBERON:0005631!5.10e-08!14;UBERON:0000158!5.10e-08!14;UBERON:0001134!6.03e-08!61;UBERON:0002036!6.03e-08!61;UBERON:0003082!6.03e-08!61;UBERON:0002385!6.64e-08!63;UBERON:0001015!6.64e-08!63;UBERON:0000383!6.64e-08!63;UBERON:0000467!1.75e-07!625;UBERON:0004290!2.24e-07!70;UBERON:0001637!2.40e-07!42;UBERON:0003509!2.40e-07!42;UBERON:0004572!2.40e-07!42;UBERON:0000947!2.44e-07!21;UBERON:0010191!2.44e-07!21;UBERON:0000480!2.58e-07!626;UBERON:0004573!3.70e-07!33;UBERON:0004571!3.70e-07!33;UBERON:0002323!4.70e-07!46;UBERON:0000478!5.54e-07!24;UBERON:0000464!6.28e-07!104;UBERON:0004458!6.51e-07!49 | |||
|ontology_enrichment_uberon_v019=UBERON:0000478;2.74e-08;24!UBERON:0005631;9.81e-08;10!UBERON:0000158;9.81e-08;10!UBERON:0004237;2.98e-07;10!UBERON:0004695;2.98e-07;10!UBERON:0002111;2.98e-07;10!UBERON:0004178;2.98e-07;10!UBERON:0000947;4.62e-07;21!UBERON:0010191;4.62e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,2.50e-10,199;UBERON:0005631,6.88e-10,14;UBERON:0000158,6.88e-10,14;UBERON:0003104,9.45e-10,160;UBERON:0009142,9.45e-10,160;UBERON:0004923,1.13e-09,66;UBERON:0005256,1.66e-08,122;UBERON:0000478,1.68e-08,24;UBERON:0002049,3.67e-08,78;UBERON:0007798,3.67e-08,78;UBERON:0005156,6.91e-08,59;UBERON:0000990,6.91e-08,59;UBERON:0003886,1.76e-07,54;UBERON:0000947,2.18e-07,21;UBERON:0010191,2.18e-07,21;UBERON:0004237,2.25e-07,10;UBERON:0004695,2.25e-07,10;UBERON:0002111,2.25e-07,10;UBERON:0004178,2.25e-07,10;UBERON:0001008,4.45e-07,48;UBERON:0004871,4.73e-07,8;UBERON:0006554,8.59e-07,47;UBERON:0004872,8.71e-07,83;UBERON:0002323,8.79e-07,46 | |||
|phase1_expression=4.72363786103447,2.78330681058278,7.75249222527841,0,5.36353313312745,9.59572376510406,2.53299878168311,0.631719873426831,0,3.93174298402414,0.697801167972428,4.36882744260345,6.33040747748289,0.618831764800233,0.331397375727916,3.36162573225888,3.01347264011988,3.65155045193687,4.39139518911456,0.984968464614303,1.02000345622126,0.313454721478088,0,0.136874425072884,0.251085279189606,0.229240217243854,0.0821005894499457,0.0787107813136792,0,0,0,0.919421224478927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,1.40648818027883,0,0.50133791063589,0,0,0,1.41802225746102,3.54767035940102,2.89854792787316,2.81605012320082,2.91436230634034,1.85392221392215,0,0,0,0,0,0,0.993812036833525,0.860234595106124,0.694281003215189,1.69592382577203,0.838998872419812,0,1.04497483268405,2.06733407335463,1.06729878806013,1.33888245105868,0.805658634218294,0,0.732186172644509,1.47065232138347,0,1.42879565254528,0.673588117878509,0.900891843866578,3.06633274931766,1.89853131913626,0.732806975721629,0,0,2.61656431285521,4.47274756525787,3.41902381494365,3.44263870114369,4.30254931123221,3.54668382198357,1.68203280042692,2.1349799145941,0.74000264525148,0.622422070799533,0.538842688278752,1.30769522490767,4.69208025699287,5.18558332031999,1.40592859100278,2.18512053781224,1.1409436430889,1.79338416662161,0.822041490506354,0,0.421352420106746,0.816616685019573,0.368502951935304,0.619954687054593,0,0.247266929278557,5.46096817162816,2.15585442544872,0.168336113954066,0.625592599359821,1.6623846929051,0,0,0.45071417671979,0.794025282120147,1.25572744982203,0.427114777637135,0.635795703478686,3.30100205692843,3.50378599410692,2.83404594050192,2.97786970130544,0,0.194874010322397,2.52433774244115,1.47279837827679,0.161646056818812,2.84007674013291,1.10827308050404,4.74769658469365,1.35282597214308,0.545492241181669,2.58124135850103,0,0.265059536642971,0.232387885739037,0.518305275076852,0,0,0,1.28648187638577,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,2.95262181849859,1.40241773803446,0.4115740113314,7.3504355692771,0,0,0,0,3.81264159483652,4.11762744716461,0.219500570817251,0,0.201057944823262,1.29623823221941,0.325808305310325,0,1.44331342025273,0.927443239800615,3.05262605013136,0.144366447761074,0,0.190254152234598,0,0.858486162094873,0,0,0,0,1.00789276919316,1.84307626415102,0.0895585227028483,0.290633938513962,2.68367875415648,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,5.7186853016134,1.30788020649984,4.18028229179415,3.36106460970222,0,1.690605505112,27.6575641248265,17.6812642749322,2.05765899409714,1.41849132023278,1.0656887160644,0.714889968290738,1.62786481617433,0,0,1.77695974371273,0.791951872933429,1.50719688529793,3.48613383440118,1.19967589418468,0,0,0,5.27174682081482,6.89171615004683,1.42636905040718,0,0.821905290201534,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24538298343828,1.50051156317903,2.71265023699736,8.94274704582471,3.21172179834891,6.30809660135739,6.67706065458465,0.902838299183157,0,2.0694614258501,6.64225598535437,6.63729006750131,3.64911180765948,1.95801157462741,1.71571711905428,0,0,0,1.81876542867756,6.65741758041988,9.97887967987945,3.72161711728165,3.37616341233737,0.561320188866147,7.94462725385346,2.55853624533352,3.37793234401576,1.48418066444991,2.92998418225046,4.43904313282818,3.12083192852475,3.63478100428535,3.60252173225874,2.53804844142407,3.80962293576241,0.276242966807689,1.26295892981067,2.54927635209404,3.8026080338233,0.451199612907412,1.00119938235739,0,1.46139224653261,0.844413031143006,0,2.55140557914773,1.0795795805107,0,4.6060894382455,3.01013864312912,2.03901018436031,3.3243040357149,2.0148727924996,0,0,1.28225062558195,4.26419039409617,3.57916234130733,1.33953315142039,0,0,0.574265537996172,0,6.42735719376638,2.03008508413456,1.54048617114644,0.460511024178389,0.827019434907183,0.966782203814463,0.580066775656914,1.02271952899321,1.69160867728801,0.495854746082934,0.576570202095319,1.02090169995667,0,1.85938219718914,4.40737285562896,4.8792608911242,2.15623506123262,5.85536633348724,2.60979897622522,0.74129687641568,1.28812398067792,2.97726695487734,4.74569137078089,1.14378116354295,1.535386747868,0.855877976067841,2.22742273548156,0.78494864019923,1.61885211824983,1.64722217841633,0.824686816419805,2.02182481573316,1.58510321173008,1.26377536871694,1.46290121726877,0.731140468893853,1.05650146756755,6.41549583617533,0.424216295861138,1.13008116620243,2.2054613741845,0,0,0.578775534266688,1.9676842561399,1.21746226177622,0.92947049429925,1.97186921772569,2.00775893085672,3.53696547647236,1.426684205925,1.77380532035299,0,0.658589785919804,0,0,0.288666338176536,0.670302275535787,0,1.60044461320525,2.58303223602738,1.68471475667626,2.21715076768338,0.689170200620878,0,0,0,0,0,0,0,0,0,0.962479855263359,1.96032172784825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390776190804081,0,0,0,0,0,0,1.46508179271894,0,0,7.671675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| |||
|short_description=p15@NR2F2 | |||
}} |
Latest revision as of 01:05, 20 September 2015
Short description: | p15@NR2F2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_15_at_NR2F2_5end |
Coexpression cluster: | C1417_Mesenchymal_leiomyoblastoma_chorionic_alveolar_uterus_extraskeletal_mesenchymal |
Association with transcript: | 125bp_to_ENST00000421109_5end |
EntrezGene: | NR2F2 |
HGNC: | 7976 |
UniProt: | Q3KQR7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 4.44e-10 | 19 |
mesodermal cell | 7.10e-09 | 121 |
smooth muscle cell | 3.46e-08 | 43 |
smooth muscle myoblast | 3.46e-08 | 43 |
muscle cell | 6.16e-08 | 55 |
vascular associated smooth muscle cell | 7.38e-08 | 32 |
aortic smooth muscle cell | 2.25e-07 | 10 |
muscle precursor cell | 5.57e-07 | 58 |
myoblast | 5.57e-07 | 58 |
multi-potent skeletal muscle stem cell | 5.57e-07 | 58 |
preadipocyte | 6.63e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
trunk | 2.50e-10 | 199 |
extraembryonic membrane | 6.88e-10 | 14 |
membranous layer | 6.88e-10 | 14 |
mesenchyme | 9.45e-10 | 160 |
entire embryonic mesenchyme | 9.45e-10 | 160 |
organ component layer | 1.13e-09 | 66 |
trunk mesenchyme | 1.66e-08 | 122 |
extraembryonic structure | 1.68e-08 | 24 |
vasculature | 3.67e-08 | 78 |
vascular system | 3.67e-08 | 78 |
reproductive structure | 6.91e-08 | 59 |
reproductive system | 6.91e-08 | 59 |
body cavity precursor | 1.76e-07 | 54 |
aorta | 2.18e-07 | 21 |
aortic system | 2.18e-07 | 21 |
blood vessel smooth muscle | 2.25e-07 | 10 |
arterial system smooth muscle | 2.25e-07 | 10 |
artery smooth muscle tissue | 2.25e-07 | 10 |
aorta smooth muscle tissue | 2.25e-07 | 10 |
renal system | 4.45e-07 | 48 |
somatic layer of lateral plate mesoderm | 4.73e-07 | 8 |
urinary system structure | 8.59e-07 | 47 |
splanchnic layer of lateral plate mesoderm | 8.71e-07 | 83 |
body cavity | 8.79e-07 | 46 |