FFCP PHASE1:Hg19::chr8:22442642..22442651,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr8:22442642..22442651,+
|short_description=p@chr8:22442642..22442651,+
|description=CAGE_peak_at_chr8:22442642..22442651,+
|association_with_transcript=NA
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr8:22442642..22442651,+ | |||
|coexpression_cluster_id=C4743 | |||
|description=CAGE_peak_at_chr8:22442642..22442651,+ | |||
|id=chr8:22442642..22442651,+ | |||
|ontology_enrichment_celltype=CL:0002537!5.41e-12!5;CL:0000349!1.21e-11!3;CL:0002577!1.21e-11!3;CL:0002536!5.22e-08!2;CL:0002602!1.31e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000349;1.23e-28;19!CL:0002537;2.52e-28;5!CL:0002577;4.02e-21;3!CL:0002581;1.78e-16;1!CL:0000039;7.15e-10;7!CL:0000586;7.15e-10;7!CL:0000153;1.13e-07;9!CL:0000447;1.13e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.20e-28,19;CL:0002537,3.66e-28,5;CL:0002577,2.17e-21,3;CL:0002581,1.41e-16,1;CL:0000039,6.69e-10,7;CL:0000586,6.69e-10,7;CL:0000153,1.29e-07,9;CL:0000447,1.29e-07,9 | |||
|ontology_enrichment_development_v019=UBERON:0009117;3.60e-07;10!UBERON:0005564;3.60e-07;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!6.91e-29!14;UBERON:0000158!6.91e-29!14;UBERON:0000478!8.29e-19!24;UBERON:0000305!3.90e-18!7;UBERON:0004871!8.95e-16!8;UBERON:0004923!1.38e-13!57;UBERON:0003124!1.12e-12!7;UBERON:0004905!2.23e-11!5;UBERON:0000982!2.23e-11!5;UBERON:0004770!2.23e-11!5;UBERON:0001987!7.96e-09!4;UBERON:0004340!7.96e-09!4;UBERON:0009568!1.31e-07!2;UBERON:0002216!1.31e-07!2;UBERON:0002209!1.31e-07!2;UBERON:0002213!1.31e-07!2;UBERON:0004267!1.31e-07!2;UBERON:0006444!1.31e-07!2;UBERON:0001995!1.31e-07!2;UBERON:0004715!1.31e-07!2;UBERON:0001468!1.31e-07!2;UBERON:0001130!1.31e-07!2;UBERON:0001066!1.31e-07!2;UBERON:0004457!8.84e-07!12;UBERON:0000042!8.84e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;7.93e-25;10!UBERON:0000158;7.93e-25;10!UBERON:0000478;1.18e-22;24!UBERON:0000305;1.90e-20;7!UBERON:0001987;4.18e-16;4!UBERON:0005406;6.67e-09;2!UBERON:0000473;9.48e-09;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,6.94e-39,14;UBERON:0000158,6.94e-39,14;UBERON:0000478,1.16e-22,24;UBERON:0000305,2.48e-20,7;UBERON:0003124,3.44e-20,7;UBERON:0004871,7.02e-18,8;UBERON:0001987,2.64e-16,4;UBERON:0004340,2.64e-16,4;UBERON:0004923,3.79e-14,66;UBERON:0005406,5.94e-09,2;UBERON:0000473,8.95e-09,8 | |||
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|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0.436882744260345,0.263766978228454,0.123766352960047,0.331397375727916,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00267582127178,0.289693037921647,0,0,0,0,0.087834785693126,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.10833939483032,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0.415941723061614,0,0.157702415033935,0.117141414992713,0,0,0,0,0,0,0,0,0,0,0,1.5156378572313,1.66435439510497,0.30239029332968,0,0,0,0.128139149255701,0,0.160853921143607,1.48418066444991,0,0.177561725313127,0.164254312027618,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633322905892992,1.31717957183961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.29740072527842,2.07875276582847,1.22864280839693,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.260427761085233,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27600463892768,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0.146178634172371,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.107410557042488,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0.169732529954025,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0.924351257262837,0,0.126166424835079,0,0,2.85568723277549,0,4.96232457488162,0,0,0,0,0,0,0,0,0,0.224263725161227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr8:22442642..22442651,+ | |||
}} | }} |
Latest revision as of 16:59, 31 July 2015
Short description: | p@chr8:22442642..22442651, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:22442642..22442651, + |
Coexpression cluster: | C4743_Placental_amniotic_testicular_chorionic_Olfactory_Synoviocyte_Amniotic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.20e-28 | 19 |
amnion mesenchymal stem cell | 3.66e-28 | 5 |
placental epithelial cell | 2.17e-21 | 3 |
perirenal preadipocyte | 1.41e-16 | 1 |
germ line cell | 6.69e-10 | 7 |
germ cell | 6.69e-10 | 7 |
GAG secreting cell | 1.29e-07 | 9 |
carbohydrate secreting cell | 1.29e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 6.94e-39 | 14 |
membranous layer | 6.94e-39 | 14 |
extraembryonic structure | 1.16e-22 | 24 |
amnion | 2.48e-20 | 7 |
chorion | 3.44e-20 | 7 |
somatic layer of lateral plate mesoderm | 7.02e-18 | 8 |
placenta | 2.64e-16 | 4 |
allantois | 2.64e-16 | 4 |
organ component layer | 3.79e-14 | 66 |
perirenal fat | 5.94e-09 | 2 |
testis | 8.95e-09 | 8 |