FFCP PHASE1:Hg19::chr14:90873536..90873555,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=801 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1442 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-133bp_to_BC042831_5end | |||
|cluster_id=chr14:90873536..90873555,+ | |||
|coexpression_cluster_id=C16 | |||
|description=CAGE_peak_30_at_CALM1_5end | |||
|id=chr14:90873536..90873555,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;9.39e-14;3!UBERON:0006601;1.53e-09;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.02e-29!57;UBERON:0005068!1.02e-29!57;UBERON:0006241!1.02e-29!57;UBERON:0007135!1.02e-29!57;UBERON:0002616!6.38e-29!59;UBERON:0003080!2.83e-28!42;UBERON:0002780!1.25e-27!41;UBERON:0001890!1.25e-27!41;UBERON:0006240!1.25e-27!41;UBERON:0000955!6.81e-25!69;UBERON:0006238!6.81e-25!69;UBERON:0002020!6.34e-24!34;UBERON:0003528!6.34e-24!34;UBERON:0001893!1.19e-23!34;UBERON:0001017!2.97e-23!82;UBERON:0001869!4.43e-23!32;UBERON:0002791!7.60e-23!33;UBERON:0005743!1.08e-22!86;UBERON:0000073!1.02e-20!94;UBERON:0001016!1.02e-20!94;UBERON:0007023!1.38e-20!115;UBERON:0002619!3.04e-19!22;UBERON:0000956!3.26e-18!25;UBERON:0000203!3.26e-18!25;UBERON:0001950!1.18e-17!20;UBERON:0002346!3.32e-17!90;UBERON:0003075!5.28e-17!86;UBERON:0007284!5.28e-17!86;UBERON:0003056!3.20e-16!61;UBERON:0000033!4.39e-13!123;UBERON:0000153!9.90e-13!129;UBERON:0007811!9.90e-13!129;UBERON:0000924!6.99e-11!173;UBERON:0006601!6.99e-11!173;UBERON:0004121!1.45e-10!169;UBERON:0001871!1.13e-07!7;UBERON:0002420!1.99e-07!9;UBERON:0007245!1.99e-07!9;UBERON:0010009!1.99e-07!9;UBERON:0010011!1.99e-07!9;UBERON:0000454!1.99e-07!9;UBERON:0002308!3.76e-07!9;UBERON:0000125!3.76e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.31e-51;22!UBERON:0001950;9.33e-50;20!UBERON:0000956;5.83e-45;25!UBERON:0000203;5.83e-45;25!UBERON:0001869;2.06e-40;32!UBERON:0002791;9.18e-37;32!UBERON:0003528;9.12e-36;34!UBERON:0002020;9.12e-36;34!UBERON:0001893;2.72e-35;34!UBERON:0002780;5.83e-28;41!UBERON:0001890;5.83e-28;41!UBERON:0000073;1.06e-27;53!UBERON:0002616;1.06e-27;53!UBERON:0000955;1.91e-21;68!UBERON:0001872;2.75e-21;5!UBERON:0001017;2.01e-19;75!UBERON:0000200;1.26e-18;6!UBERON:0001016;2.00e-18;83!UBERON:0001870;3.35e-14;3!UBERON:0004733;2.47e-12;12!UBERON:0002028;2.47e-12;12!UBERON:0002680;8.55e-12;9!UBERON:0001895;8.55e-12;9!UBERON:0004732;2.45e-11;13!UBERON:0001871;2.25e-10;6!UBERON:0002702;2.30e-10;2!UBERON:0001876;7.19e-10;2!UBERON:0001897;8.96e-10;2!UBERON:0010225;8.96e-10;2!UBERON:0000349;9.94e-09;5!UBERON:0002021;1.26e-08;5!UBERON:0007023;5.46e-08;114!UBERON:0011216;6.74e-08;132!UBERON:0002037;4.30e-07;6!UBERON:0002298;7.47e-07;6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.53e-53,56;UBERON:0005068,1.53e-53,56;UBERON:0006241,1.53e-53,56;UBERON:0007135,1.53e-53,56;UBERON:0000073,9.20e-53,53;UBERON:0002616,9.20e-53,53;UBERON:0002619,2.59e-51,22;UBERON:0001950,1.01e-49,20;UBERON:0000955,1.02e-49,68;UBERON:0006238,1.02e-49,68;UBERON:0000956,6.45e-45,25;UBERON:0000203,6.45e-45,25;UBERON:0001017,8.84e-44,81;UBERON:0001869,1.28e-43,32;UBERON:0002780,3.68e-41,41;UBERON:0001890,3.68e-41,41;UBERON:0003080,3.68e-41,41;UBERON:0006240,3.68e-41,41;UBERON:0001893,7.34e-41,34;UBERON:0003528,9.25e-41,34;UBERON:0002020,9.25e-41,34;UBERON:0002791,5.27e-39,32;UBERON:0001016,8.74e-39,89;UBERON:0002346,2.49e-35,86;UBERON:0003075,1.15e-34,82;UBERON:0007284,1.15e-34,82;UBERON:0010371,3.70e-28,104;UBERON:0003056,3.22e-26,61;UBERON:0007023,1.30e-25,114;UBERON:0010314,1.42e-22,132;UBERON:0004121,2.26e-21,171;UBERON:0000924,2.26e-21,171;UBERON:0006601,2.26e-21,171;UBERON:0001872,4.27e-21,5;UBERON:0000200,1.02e-18,6;UBERON:0001870,1.94e-14,3;UBERON:0011216,1.42e-13,223;UBERON:0003076,3.98e-13,15;UBERON:0003057,3.98e-13,15;UBERON:0004733,1.96e-12,12;UBERON:0002028,1.96e-12,12;UBERON:0007277,1.96e-12,12;UBERON:0000025,3.02e-12,192;UBERON:0002680,5.67e-12,9;UBERON:0001895,5.67e-12,9;UBERON:0010092,5.67e-12,9;UBERON:0004732,1.98e-11,13;UBERON:0001871,1.77e-10,6;UBERON:0002702,2.53e-10,2;UBERON:0001876,4.34e-10,2;UBERON:0001897,7.73e-10,2;UBERON:0010225,7.73e-10,2;UBERON:0000349,7.60e-09,5;UBERON:0002021,1.25e-08,5;UBERON:0004111,1.65e-08,240;UBERON:0002037,2.65e-07,6;UBERON:0006215,2.65e-07,6;UBERON:0002298,9.49e-07,6 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0.140954404095971,0,0.446961094427288,0,0,0,0.522371256399677,0,0,0,0.263766978228454,0,0.331397375727916,0.672325146451775,0,0,0.975865597581014,0,0,0,0,0.136874425072884,0.376627918784408,0.0764134057479513,0.164201178899891,0,0,0,0,0,0.30120591877825,0,0,0.284338464974843,0,0,0.200544447470142,0.217010870715852,0,0.32389366601898,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0.622822248995575,0,1.0429658368404,0,0,0,0,0,0.212604299965044,0,0,0,0.16072558669708,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0.334372990781356,0.651844533267181,0,1.94826728407911,0.111410456885174,0.294605907474837,0.221533894583621,0,0.512365278902701,0,0,0.276350017785848,0,0,0.535081656179426,0,0,0.383220493601921,0,0,0,0.651083453856419,0,0,0.127986611154418,0,0,0.821127996921047,0,0.802320587350522,0.144824403882799,0,0,0,0.361439152384566,0,0,0,0,0,0,0.351339142772504,0.392937226493138,0,0,0.324547393654683,0.174129737299267,1.19662164466979,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0.66944122552934,0,0,0.24406205754817,0.367663080345869,0,0.0892997282840798,0,0,0,0,0.549605231791222,0,0,0,0.496971951695318,0.12663051166458,0.132409180813219,0,0.354668382198357,0,0,0,0,0.538842688278752,0,0,0,0,0,0,0.298897361103602,0.117434498643765,0.161872944368132,0,0,0.122834317311768,0,0,0.494533858557114,0,0,0,0,0,0,0.30648779579902,0,0,0.179389635688862,0,0.211931901159562,0,0,0,0.18611685633159,0,0.0974370051611986,0.252433774244115,0,0,0,0.10075209822764,0,0.193260853163297,0,0,0,0,0,0.10366105501537,0,0.36497735907583,0,0.643240938192885,0,0,0,0.118306800039844,0,0,0,0,0.474541238222193,0.134831308160164,0,0,0,0,0,0,0,0,0,0.441463099414651,0.245976877086227,0,0,0,0.201057944823262,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0.445893486866185,1.87467667973554,0,0.141775097242386,0,0,0.383382679165211,0,0,0.207328115540772,0,0,0.253991577168676,0.381988425558278,0,1.71072446022705,0.102827492703324,1.20137223137567,1.14330573052231,0,0,0.07333828582095,0,0,0.845302752556,0,1.04007436911366,0,0,0.266422179016099,0,0.542621605391443,0,0,0,0,0,0,0.099972991182057,0,1.00451418286425,0,0.479249710983165,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0.112085143993527,0,0.431255149719035,0.513372145118994,0,0,0.773288812777695,0.502548796003046,0,0.749007023947182,0,0,0,0,0,0,0.535286966391485,0,0.35142424497814,0,0,0,0,0.368738337083406,0,0,0.343143423810856,0,0,0.426910231213777,0,0,0,0.248107807818777,0,0.280660094433074,0.128139149255701,0,0.321707842287215,0,0,0,0,0.519254429183621,0.116210378459959,0.241718899183244,0,0.0920809889358963,0.114814448164607,0.364182336013434,0,0,0.231046011313244,0,1.46139224653261,0.211103257785751,0,0.170093705276516,0,0,0,0,0,0.831076008928724,0,0,0,0.512900250232778,0,0,0,0.27470839445503,0,0,0,0,0,0.154048617114644,0,0.275673144969061,0,0.145016693914229,0.340906509664404,0.356128142586949,0,0,0.127612712494584,0,0.929691098594572,0.31481234683064,0,0,0,0,0,0,0.372158369359667,0,0.38126038784765,0,0,0,0,0,0,0,0,0,0,0,0.487426979262569,0,0.136499911407986,0.141405431953713,0,0,0,0,0.578775534266688,0,0,0,0,0.143411352204052,0,0,0,1.05553817648832,0.329294892959902,0,0,0,0,0,0.188287601553558,0,0,0.443430153536676,0,0,0,0,0,0,0,0.540031437238115,0,0.213648142254946,0,0,0.371606350251437,0.144269212976445,0.142283686696828,0.159426272728822,0.399158742865633,0,0.211673582723883,0.324621940274555,0,0,0.313359791546046,0,0.169291777801603,0.321176150207399,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0.121360521749513,0,0,0.47748896947538,0.296964680832639,0.307160702099232,3.97659059106519,1.68803299692615,0,0.329607748453519,0.211125408127993,0.398495976502139,0,0.251932747854276,0,0,0,0.0898683511473268,0,0,0.197286811273867,2.3948309234694,0,3.87733098438087,2.31920245404628,5.98841394003583,0,0,0.724999575434793,0,0,0.236387681767936,0,0,0.173624994933292,0.885741385813839,0.964771509003264,1.52581736317083,1.87984741883082,4.13766666534966,0.438770794307945,0,0,0.307801034015188,0.113942055847001,0,0.0897576444097721,0.108647371922008,0.638002319463839,0,0,0,0,0,0,0,0,0,0,0,0,0.282706142867882,0,0,0.0884575645033392,0,0,0,0,0.337005664903385,0,0.937057782901357,0,0,0,0.789168805698781,1.20990716048664,0.91821828489147,0.189559738885464,0,0,0,0,0,0,0,0,0.347119476670262,0,0,0.52418000472609,0.171986032471617,0,0,0.0821154570532092,0.290967049465258,0.0882561266915003,0,0.137041924646751,0,1.89932387867636,0,0,0.213452994739353,0.599428828746391,0.288180834308212,0,0.343189995723929,0,0,0,0,0,0,0,0.600420288709789,0.547621515567972,0,0.429765441419957,0.262887354279314,0.279282401272254,0,0,0.798716001995964,1.28767814440971,0,0.0671834724867263,0,0,0,0,0.0674035438541849,0,0.254019996197353,5.56660782866512,0.953423842781029,0.482259445395058,0,0,0,0,1.03274246318642,0,0,0.0524545881349981,0,0.717149357331379,0,0,0,0,0,0,0,0,0,0.681552087141687,0.113312091520126,0,0,0.775697738169303,1.19009341568421,0,0,0,0,0,0,0,0,0,0,0.2506898940227,0.306345576763462,0.327872630709804,0,7.08854543973589,5.85726071529423,2.1282458220105,1.14681839138014,0.221858103073705,0.248385611765534,0,0,0.151649117541648,0.285465333544967,0,1.40500471742064,0,0,0,0,0.378806010550178,0.251567901752575,0.889811221596536,0,0,0,0.295710299979268,0.159296767163702,0,0.310525913752519,0,0.797525143673985,0,0,0,0,0.181848659202559,0.107410557042488,0,0,0.800055529326307,0.343395705182793,0,0,0,0,0.260994291965212,0,0,0,0,0.308801447160972,0,0,0.192914038270915,0,0,0,0.303859956177382,0.691292180758654,0,0,0,0.655219697692825,0,0.211312123358627,0.19998739585493,0.106691729694141,0,0,0,0,0,0,0.215649622793364,0.157265941855896,0.109209638192014,0,0.850299680406731,1.11542187833102,0,0,0.0788617450012534,0,0.705351887381368,0.3062454773532,0.834979926253974,1.41696576325585,0.798169295285756,3.28186182785208,2.01657356977374,0.622415272177961,1.45328081068666,0,0,0,0,0.231051332300676,0,0,0,0.150420656698515,0.40341013740704,0,0,0.163771917510097,0.147856086217045,1.41828927698629,2.34323429584154,1.44680757550829,1.14148458349032,1.09394961803644,0,0.992422356778588,0,0.127762427639595,0.535701835878287,0.336283722218824,0.606965604236632,0.227662191351298,0.0887023701626388,0.230467975111559,0,1.22345519358297,1.38122824481983,0,0.111231401892069,0,2.35673384874003,0.280272163313789,0.913158720509496,0,0,0.142953088353313,0,0,0,0.801711364730253,0,0.17071847709395,0,0.430227358820278,0.236664001461131,0,0.423387050190929,0.22910686854405,0,0,0,0,0.243835849964539,0.647428837187895,0.102662806856247,0,0,0.701818390386317,0.795803100645473,0.356760272332706,0,0.109940516745429,0.301925687133347,0.154348316215889,0,0.470317296361523,0.735444965261716,0.235676547101626,1.17785080268967,0,0,0.339854229375634,0,0,0,0.178553938605658,0,0.0802413666891683,0,0,0.286679166302903,0,0.815897882290976,0.436350690340377,0.5290268405154,0,0,0.865253124247578,0,0,0,0,0,0,0,0.151557396436479,0,2.48750831837634,1.24119595034274,0,0,0,0.124149428591716,0.112131862580613,0.0636471582781649,0.202117188958219,0,0.342233301085281,0.26940821205835,0.215166616178029,0.332660356546013,0,0,0,0,0,0,0,0,0.201273793591026,0 | |||
|short_description=p30@CALM1 | |||
}} |
Latest revision as of 12:28, 16 September 2015
Short description: | p30@CALM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_30_at_CALM1_5end |
Coexpression cluster: | C16_medial_amygdala_occipital_parietal_olfactory_putamen_brain |
Association with transcript: | -133bp_to_BC042831_5end |
EntrezGene: | CALM1 |
HGNC: | 1442 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data