FFCP PHASE1:Hg19::chr14:29235215..29235231,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr14:29235215..29235231,- | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_at_chr14:29235215..29235231,- | |||
|id=chr14:29235215..29235231,- | |||
|ontology_enrichment_celltype=CL:0002319!1.50e-15!25;CL:0000243!3.22e-13!15;CL:0000125!3.22e-13!15;CL:0000030!3.22e-13!15;CL:0000339!3.22e-13!15;CL:0000095!1.96e-11!17;CL:0000123!1.96e-11!17;CL:0000133!7.13e-10!59;CL:0000128!2.08e-08!7;CL:0000126!2.08e-08!7;CL:0000127!2.08e-08!7;CL:0002453!2.08e-08!7;CL:0000221!9.37e-08!71 | |||
|ontology_enrichment_celltype_v019=CL:0002319;2.40e-17;25!CL:0000128;2.04e-11;7!CL:0000126;2.04e-11;7!CL:0000127;2.04e-11;7!CL:0000243;8.07e-11;15!CL:0000125;8.07e-11;15!CL:0002605;1.85e-10;3!CL:0000064;3.34e-10;3!CL:0000067;3.34e-10;3!CL:0005012;3.34e-10;3!CL:0002304;3.34e-10;3!CL:0000095;1.60e-09;17!CL:0000047;9.33e-08;2!CL:0000569;7.20e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,2.66e-17,25;CL:0000133,1.17e-13,59;CL:0000128,2.03e-11,7;CL:0000126,2.03e-11,7;CL:0000127,2.03e-11,7;CL:0002453,2.03e-11,7;CL:0000243,8.58e-11,15;CL:0000125,8.58e-11,15;CL:0000030,8.58e-11,15;CL:0000339,8.58e-11,15;CL:0002605,1.65e-10,3;CL:0000221,2.07e-10,72;CL:0000047,3.39e-10,8;CL:0000064,3.91e-10,3;CL:0000067,3.91e-10,3;CL:0005012,3.91e-10,3;CL:0002304,3.91e-10,3;CL:0000095,1.69e-09,17;CL:0000123,1.69e-09,17;CL:0000569,8.82e-07,4;CL:0000011,8.82e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000339;8.07e-11;15!CL:0000133;1.28e-07;59!UBERON:0006238;4.33e-07;10!CL:0000011;7.20e-07;4!UBERON:0010122;7.85e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!1.52e-42!41;UBERON:0001890!1.52e-42!41;UBERON:0006240!1.52e-42!41;UBERON:0003080!3.00e-41!42;UBERON:0001017!1.79e-39!82;UBERON:0001893!3.10e-39!34;UBERON:0005743!2.80e-38!86;UBERON:0002791!5.27e-38!33;UBERON:0003056!8.73e-38!61;UBERON:0001869!1.96e-37!32;UBERON:0000073!2.00e-37!94;UBERON:0001016!2.00e-37!94;UBERON:0000955!1.24e-36!69;UBERON:0006238!1.24e-36!69;UBERON:0002020!2.51e-34!34;UBERON:0003528!2.51e-34!34;UBERON:0001049!9.64e-31!57;UBERON:0005068!9.64e-31!57;UBERON:0006241!9.64e-31!57;UBERON:0007135!9.64e-31!57;UBERON:0000153!2.39e-29!129;UBERON:0007811!2.39e-29!129;UBERON:0002616!2.82e-29!59;UBERON:0000956!1.86e-28!25;UBERON:0000203!1.86e-28!25;UBERON:0000033!8.08e-27!123;UBERON:0003075!9.62e-27!86;UBERON:0007284!9.62e-27!86;UBERON:0002346!6.77e-25!90;UBERON:0002619!6.44e-24!22;UBERON:0001950!2.21e-21!20;UBERON:0004121!4.16e-21!169;UBERON:0000924!3.51e-20!173;UBERON:0006601!3.51e-20!173;UBERON:0000025!1.50e-13!194;UBERON:0007023!1.51e-13!115;UBERON:0002420!1.32e-12!9;UBERON:0007245!1.32e-12!9;UBERON:0010009!1.32e-12!9;UBERON:0010011!1.32e-12!9;UBERON:0000454!1.32e-12!9;UBERON:0009663!4.89e-10!7;UBERON:0000477!8.84e-10!286;UBERON:0000483!8.93e-10!309;UBERON:0000119!1.70e-09!312;UBERON:0001871!1.12e-08!7;UBERON:0000200!1.82e-08!6;UBERON:0004111!2.91e-08!241;UBERON:0000475!3.33e-08!365;UBERON:0000349!7.46e-08!5;UBERON:0000064!1.06e-07!219;UBERON:0002308!1.66e-07!9;UBERON:0000125!1.66e-07!9;UBERON:0001872!2.52e-07!5;UBERON:0000488!2.82e-07!4;UBERON:0000369!8.33e-07!4;UBERON:0002435!8.33e-07!4;UBERON:0000204!8.33e-07!4;UBERON:0010082!8.33e-07!4;UBERON:0000481!8.75e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;8.74e-21;32!UBERON:0002791;3.35e-19;32!UBERON:0001893;2.89e-17;34!UBERON:0002780;3.60e-17;41!UBERON:0001890;3.60e-17;41!UBERON:0003528;2.02e-16;34!UBERON:0002020;2.02e-16;34!UBERON:0000956;3.11e-14;25!UBERON:0000203;3.11e-14;25!UBERON:0000488;1.23e-12;4!UBERON:0000955;4.92e-12;68!UBERON:0001017;1.36e-11;75!UBERON:0000073;5.22e-11;53!UBERON:0002616;5.22e-11;53!UBERON:0001778;3.34e-10;3!UBERON:0001775;3.34e-10;3!UBERON:0001016;4.60e-10;83!UBERON:0007625;2.30e-09;11!UBERON:0005383;2.71e-09;3!UBERON:0005382;2.71e-09;3!UBERON:0002619;6.97e-09;22!UBERON:0002203;2.02e-08;6!UBERON:0001768;2.02e-08;6!UBERON:0002200;2.02e-08;6!UBERON:0002420;9.69e-08;9!UBERON:0007245;9.69e-08;9!UBERON:0010009;9.69e-08;9!UBERON:0010011;9.69e-08;9!UBERON:0000454;9.69e-08;9!UBERON:0001801;3.35e-07;14!UBERON:0000369;4.56e-07;4!UBERON:0002435;4.56e-07;4!UBERON:0000204;4.56e-07;4!UBERON:0001873;7.85e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.74e-29,81;UBERON:0003056,1.29e-25,61;UBERON:0001016,1.44e-25,89;UBERON:0002780,2.71e-23,41;UBERON:0001890,2.71e-23,41;UBERON:0003080,2.71e-23,41;UBERON:0006240,2.71e-23,41;UBERON:0000955,2.44e-22,68;UBERON:0006238,2.44e-22,68;UBERON:0001869,3.78e-22,32;UBERON:0001893,1.25e-20,34;UBERON:0002791,1.20e-19,32;UBERON:0003075,5.08e-19,82;UBERON:0007284,5.08e-19,82;UBERON:0000073,6.29e-19,53;UBERON:0002616,6.29e-19,53;UBERON:0003528,2.75e-18,34;UBERON:0002020,2.75e-18,34;UBERON:0002346,8.07e-18,86;UBERON:0001049,1.22e-17,56;UBERON:0005068,1.22e-17,56;UBERON:0006241,1.22e-17,56;UBERON:0007135,1.22e-17,56;UBERON:0004121,2.08e-15,171;UBERON:0000924,2.08e-15,171;UBERON:0006601,2.08e-15,171;UBERON:0000956,2.12e-14,25;UBERON:0000203,2.12e-14,25;UBERON:0010371,1.43e-13,104;UBERON:0010314,2.77e-13,132;UBERON:0000488,2.29e-12,4;UBERON:0001778,3.91e-10,3;UBERON:0001775,3.91e-10,3;UBERON:0011216,1.06e-09,223;UBERON:0005383,1.98e-09,3;UBERON:0005382,1.98e-09,3;UBERON:0007625,3.44e-09,11;UBERON:0000025,3.77e-09,192;UBERON:0002619,5.32e-09,22;UBERON:0002203,3.02e-08,6;UBERON:0001768,3.02e-08,6;UBERON:0002200,3.02e-08,6;UBERON:0002420,4.96e-08,9;UBERON:0007245,4.96e-08,9;UBERON:0010009,4.96e-08,9;UBERON:0010011,4.96e-08,9;UBERON:0000454,4.96e-08,9;UBERON:0000369,3.61e-07,4;UBERON:0002435,3.61e-07,4;UBERON:0000204,3.61e-07,4;UBERON:0010082,3.61e-07,4;UBERON:0001801,4.54e-07,14;UBERON:0001873,5.93e-07,2;UBERON:0010122,5.93e-07,2;UBERON:0009663,6.65e-07,7;UBERON:0000483,9.46e-07,306 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.03395087871065,3.61616716814386,1.46062018077475,3.41552959153355,0.123121058076788,2.04000691244253,0,3.72106783270374,5.61185142798825,4.01736446703369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.11964896641424,3.1042115644759,3.33772185633879,0.196468613246569,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.709336764396714,0,0,0,0.933633106199299,0.134710672069688,0.163461903113459,0,0,0,0.312160076830321,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.60967095213783,0,0,0,0,0,0,0,1.02940686179115,0,0,0,0.0925884451585296,0,0,0,2.31860809950154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.35236560556159,7.8083912314573,9.27946575333234,2.01019518401218,14.0346525363696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.11552657510173,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511795582622668,0.42793898803392,0,0,0,0,0,0,3.17020642346017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281695602532241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71528151186722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,1.96937182974718,0,0,0,0.19924798825107,0,0,5.01116544260559,0.369254416383208,0,0,0,0,0,0,0,0.969332746095218,0.278304294485554,3.99227596002388,0,0,0,0,0,0,0,0,0,2.65722415744152,1.5677537021303,0,0,0,1.09692698576986,0,0,0,0,0,0,0.651884231532048,0,0,0,0,0,0,1.1279783030859,1.17637520590644,1.51039428278258,0.37950746544837,0,0.210998064528027,0,0,1.08194319871046,0,0,0,0,0,0,0.269604531922708,0.802577647298789,0.234264445725339,0,0,0,0,0,5.50930970934882,0,1.35291077473043,1.45163467956146,0,0,0,0,1.70765727617876,0,0,0,0,0,0.687944129886466,0,0,0,0.0969890164884194,0,0,0,0,0.569797163602908,0,0,0,0,0,0.114536596165916,0,0,0,0,0,0,3.05994652908965,0.866851769704557,1.80126086612937,0.684526894459965,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,1.0896272488926,0,0,0,0,0,0.850493793212345,0,0,0,1.16160370171347,0,0,0,0,0,0,0,0,1.19730191562487,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27668251554036,0,0,0,0,1.09937867375164,1.77213635993397,1.09823638411767,0.3755727921195,0,0,0,4.28880768302315,3.12451019905266,0,0,0,0,0,0,0,0,0,0,0,0.915360273587694,1.05861646634267,1.39893480524502,1.47855149989634,0.159296767163702,0,0,0,0,0,0,0,0,0,0.107410557042488,1.39210127963548,0,0,0,0,0,0,0,0,0,1.62065732026684,0,0,0,0,0,0,0,0,0,2.43087964941906,0.691292180758654,0,0,0.163565394255844,0.655219697692825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318004350653419,0,2.40171224485641,0,0,0.770750701157514,0,0.638535436228605,1.64093091392604,15.6284451657465,0.345786262321089,0.807378228159255,0,0,0,0,0,0,0,0,0,1.0085253435176,0,0,0,0,1.01306376927592,0.781078098613847,0.413373593002368,0.570742291745161,12.580420607419,0,0,0,0,0,0,1.21393120847326,1.59363533945908,0,0.115233987555779,0,0,0.591954962065642,0,0,0,1.41404030924402,0,0,0,0,0.0714765441766563,0,0,0.869291361512897,0,0,0,0,0,0.709992004383392,0.340853619036631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.769583617218004,4.22695961986686,0,0,0.940634592723046,0,0,0,0,0,0,0.0939839179798536,0.0644578879735772,0,0,0,0,0,0.458729283404541,0.143339583151451,2.0510303085114,0.815897882290976,7.41796173578642,0,0,0,0,0.252332849670158,0,0,0,0,0.18378979906969,0,0.0757786982182394,0,1.65833887891756,0.517164979309476,0.426467963801962,1.90451545170992,0.258355639344024,0.434523000071005,0,0,0.202117188958219,0,0,0,0.143444410785353,0.665320713092027,0,0.533636729388577,0,0,0,0,0,0,1.20764276154616,0 | |||
|short_description=p@chr14:29235215..29235231,- | |||
}} |
Latest revision as of 20:03, 24 July 2015
Short description: | p@chr14:29235215..29235231, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:29235215..29235231, - |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 2.66e-17 | 25 |
neurectodermal cell | 1.17e-13 | 59 |
oligodendrocyte | 2.03e-11 | 7 |
macroglial cell | 2.03e-11 | 7 |
astrocyte | 2.03e-11 | 7 |
oligodendrocyte precursor cell | 2.03e-11 | 7 |
glial cell (sensu Vertebrata) | 8.58e-11 | 15 |
glial cell | 8.58e-11 | 15 |
glioblast | 8.58e-11 | 15 |
glioblast (sensu Vertebrata) | 8.58e-11 | 15 |
astrocyte of the cerebral cortex | 1.65e-10 | 3 |
ectodermal cell | 2.07e-10 | 72 |
neuronal stem cell | 3.39e-10 | 8 |
ciliated cell | 3.91e-10 | 3 |
ciliated epithelial cell | 3.91e-10 | 3 |
multi-ciliated epithelial cell | 3.91e-10 | 3 |
non-pigmented ciliary epithelial cell | 3.91e-10 | 3 |
neuron associated cell | 1.69e-09 | 17 |
neuron associated cell (sensu Vertebrata) | 1.69e-09 | 17 |
cardiac mesenchymal cell | 8.82e-07 | 4 |
migratory trunk neural crest cell | 8.82e-07 | 4 |