FFCP PHASE1:Hg19::chr13:29004237..29004250,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:29004237..29004250,- | |||
|coexpression_cluster_id=C50 | |||
|description=CAGE_peak_at_chr13:29004237..29004250,- | |||
|id=chr13:29004237..29004250,- | |||
|ontology_enrichment_celltype=CL:0000945!9.35e-15!24;CL:0000826!9.35e-15!24;CL:0002541!1.20e-11!3;CL:0000236!2.31e-11!14 | |||
|ontology_enrichment_celltype_v019=CL:0002541;1.71e-66;3!CL:0000349;2.84e-24;19!CL:0002537;3.42e-11;5!CL:0000134;1.22e-08;55!CL:0000723;7.92e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.71e-66,3;CL:0000349,2.96e-24,19;CL:0002537,3.60e-11,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000476!1.20e-11!3;UBERON:0000920!1.20e-11!3;UBERON:0003124!1.54e-08!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.71e-66;3!UBERON:0000920;1.71e-66;3!UBERON:0005631;4.50e-45;10!UBERON:0000158;4.50e-45;10!UBERON:0000478;1.94e-19;24!UBERON:0000305;2.26e-08;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.71e-66,3;UBERON:0005631,1.63e-32,14;UBERON:0000158,1.63e-32,14;UBERON:0003124,2.74e-29,7;UBERON:0000478,2.00e-19,24;UBERON:0000305,2.35e-08,7;UBERON:0004923,1.21e-07,66;UBERON:0004871,1.80e-07,8 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.0821005894499457,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0,0,0,1.27867425159808,0,0,0,0.290209238628584,0,0,0,0.521482918420201,0.217188844705117,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889509253863555,0.853460445133014,0.400395987036012,0.574752439954483,0.661044872784862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0.169560592310488,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0.144269212976445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19372242368845,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241192877250816,0,0,0,0,0,0,0,0,0,0,0,7.97502899329799,0.274792780205587,34.1142256651926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.182454789215666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0.429226048136571,0,0,0,0,0,0,0,0,0.169346664131569,0,0.408610218334727,0,0.137539436597234,0.415440338029185,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0.122026264901963,0.1251909307065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0,0,0,0,0.79832133146375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0.4226557275834,0,0,0.128915775947154,0,0,0,0,0,0,0.143339583151451,0,0,0,0.5290268405154,0,0,0,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0.103432995861895,0,0,0,0,0,0.0636471582781649,0.202117188958219,0,0,0,0,0.332660356546013,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:29004237..29004250,- | |||
}} |
Latest revision as of 15:25, 24 July 2015
Short description: | p@chr13:29004237..29004250, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:29004237..29004250, - |
Coexpression cluster: | C50_chorionic_placenta_amniotic_migratory_smallcell_chronic_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.71e-66 | 3 |
extraembryonic cell | 2.96e-24 | 19 |
amnion mesenchymal stem cell | 3.60e-11 | 5 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.71e-66 | 3 |
extraembryonic membrane | 1.63e-32 | 14 |
membranous layer | 1.63e-32 | 14 |
chorion | 2.74e-29 | 7 |
extraembryonic structure | 2.00e-19 | 24 |
amnion | 2.35e-08 | 7 |
organ component layer | 1.21e-07 | 66 |
somatic layer of lateral plate mesoderm | 1.80e-07 | 8 |