FFCP PHASE1:Hg19::chr13:23755099..23755123,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6445 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10809 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000537476_5end | |||
|cluster_id=chr13:23755099..23755123,+ | |||
|coexpression_cluster_id=C20 | |||
|description=CAGE_peak_3_at_SGCG_5end | |||
|id=chr13:23755099..23755123,+ | |||
|ontology_enrichment_celltype=CL:0000136!1.39e-22!15;CL:0000325!3.10e-07!39;CL:0002617!6.12e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:0000136;1.55e-14;13!CL:0002616;7.79e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000136,1.30e-12,15;CL:0002616,7.15e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0005062;2.05e-13;4!UBERON:0007284;2.05e-13;4!UBERON:0010226;2.36e-07;1!UBERON:0010227;2.58e-07;1!UBERON:0004140;3.36e-07;1!UBERON:0004874;4.78e-07;1!UBERON:0000358;5.68e-07;1 | |||
|ontology_enrichment_disease=DOID:114!6.48e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:114;7.44e-13;2!DOID:178;4.01e-07;1!DOID:326;4.01e-07;1!DOID:3978;4.01e-07;1!DOID:3394;4.01e-07;1!DOID:5844;4.01e-07;1!DOID:1287;7.81e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,7.44e-13,2;DOID:178,4.01e-07,1;DOID:326,4.01e-07,1;DOID:3978,4.01e-07,1;DOID:3394,4.01e-07,1;DOID:5844,4.01e-07,1;DOID:1287,7.81e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.29e-11!115;UBERON:0004151!7.54e-11!3;UBERON:0003978!1.30e-10!3;UBERON:0009751!1.30e-10!3;UBERON:0000946!1.30e-10!3;UBERON:0002523!1.30e-10!3;UBERON:0005983!1.30e-10!3;UBERON:0002165!1.30e-10!3;UBERON:0002062!1.30e-10!3;UBERON:0007280!1.30e-10!3;UBERON:0007100!1.76e-08!27;UBERON:0003688!3.38e-08!6;UBERON:0002358!3.38e-08!6;UBERON:0003684!3.38e-08!6;UBERON:0001178!3.38e-08!6;UBERON:0000341!9.90e-08!2;UBERON:0002081!1.13e-07!2;UBERON:0002133!1.60e-07!2;UBERON:0001630!1.71e-07!2;UBERON:0005090!1.71e-07!2;UBERON:0003127!2.74e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0004151;4.11e-18;3!UBERON:0003978;1.05e-17;3!UBERON:0000946;1.05e-17;3!UBERON:0007100;2.14e-17;25!UBERON:0000341;1.58e-12;2!UBERON:0002081;1.77e-12;2!UBERON:0002133;3.21e-12;2!UBERON:0005090;4.91e-12;2!UBERON:0001630;4.91e-12;2!UBERON:0000948;5.80e-09;22!UBERON:0001723;6.94e-09;3!UBERON:0001033;6.94e-09;3!UBERON:0001134;1.02e-08;16!UBERON:0002036;1.02e-08;16!UBERON:0002084;2.36e-07;1!UBERON:0002082;2.36e-07;1!UBERON:0002079;2.58e-07;1!UBERON:0002146;3.36e-07;1!UBERON:0005623;3.36e-07;1!UBERON:0007029;4.78e-07;1!UBERON:0000989;4.78e-07;1!UBERON:0002135;4.78e-07;1!UBERON:0008811;4.78e-07;1!UBERON:0002426;4.78e-07;1!UBERON:0003831;4.78e-07;1!UBERON:0003898;4.78e-07;1!UBERON:0004830;4.78e-07;1!UBERON:0003830;4.78e-07;1!UBERON:0005175;4.78e-07;1!UBERON:0001774;4.78e-07;1!UBERON:0001103;4.78e-07;1!UBERON:0002134;7.79e-07;1!UBERON:0005208;7.79e-07;1!UBERON:0004145;7.79e-07;1!UBERON:0005946;7.79e-07;1!UBERON:0005965;7.79e-07;1!UBERON:0002078;7.79e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,4.61e-18,3;UBERON:0003978,1.21e-17,3;UBERON:0009751,1.21e-17,3;UBERON:0000946,1.21e-17,3;UBERON:0002523,1.21e-17,3;UBERON:0005983,1.21e-17,3;UBERON:0002165,1.21e-17,3;UBERON:0002062,1.21e-17,3;UBERON:0007280,1.21e-17,3;UBERON:0007100,5.69e-16,27;UBERON:0000341,1.58e-12,2;UBERON:0002081,1.98e-12,2;UBERON:0010227,1.98e-12,2;UBERON:0002133,3.70e-12,2;UBERON:0005090,4.15e-12,2;UBERON:0001630,4.15e-12,2;UBERON:0007023,4.22e-12,114;UBERON:0003103,1.18e-11,68;UBERON:0001723,7.21e-09,3;UBERON:0001033,7.21e-09,3;UBERON:0010056,7.21e-09,3;UBERON:0000948,3.74e-08,24;UBERON:0005498,3.74e-08,24;UBERON:0004140,3.74e-08,24;UBERON:0009881,3.74e-08,24;UBERON:0004141,3.74e-08,24;UBERON:0003084,3.74e-08,24;UBERON:0007005,3.74e-08,24;UBERON:0004139,3.74e-08,24;UBERON:0004291,3.74e-08,24;UBERON:0004797,7.74e-08,7;UBERON:0002084,2.36e-07,1;UBERON:0002082,2.36e-07,1;UBERON:0010226,2.36e-07,1;UBERON:0002079,2.66e-07,1;UBERON:0002146,3.36e-07,1;UBERON:0005623,3.36e-07,1;UBERON:0000989,4.25e-07,1;UBERON:0008811,4.25e-07,1;UBERON:0006258,4.25e-07,1;UBERON:0005876,4.25e-07,1;UBERON:0004874,4.25e-07,1;UBERON:0007029,4.51e-07,1;UBERON:0002135,5.06e-07,1;UBERON:0002426,5.37e-07,1;UBERON:0003831,5.37e-07,1;UBERON:0003898,5.37e-07,1;UBERON:0004830,5.37e-07,1;UBERON:0003830,5.37e-07,1;UBERON:0005175,5.37e-07,1;UBERON:0001774,5.37e-07,1;UBERON:0001103,5.37e-07,1;UBERON:0010084,5.37e-07,1;UBERON:0002134,8.49e-07,1;UBERON:0005208,8.49e-07,1;UBERON:0005946,8.49e-07,1;UBERON:0005965,8.49e-07,1;UBERON:0002078,8.49e-07,1;UBERON:0005418,8.98e-07,1;UBERON:0001389,8.98e-07,1;UBERON:0000026,8.98e-07,1;UBERON:0008784,8.98e-07,1;UBERON:0006058,8.98e-07,1;UBERON:0003663,8.98e-07,1;UBERON:0004256,8.98e-07,1;UBERON:0004708,8.98e-07,1;UBERON:0002101,8.98e-07,1;UBERON:0004709,8.98e-07,1;UBERON:0002529,8.98e-07,1;UBERON:0010538,8.98e-07,1;UBERON:0003661,8.98e-07,1;UBERON:0010890,8.98e-07,1;UBERON:0002471,8.98e-07,1;UBERON:0001383,8.98e-07,1;UBERON:0004357,8.98e-07,1;UBERON:0004347,8.98e-07,1;UBERON:0005420,8.98e-07,1;UBERON:0005732,8.98e-07,1;UBERON:0010758,8.98e-07,1;UBERON:0010707,8.98e-07,1;UBERON:0000978,8.98e-07,1;UBERON:0002103,8.98e-07,1;UBERON:0001665,8.98e-07,1;UBERON:0003823,8.98e-07,1;UBERON:0000154,8.98e-07,1;UBERON:0010709,8.98e-07,1;UBERON:0005733,8.98e-07,1;UBERON:0005730,8.98e-07,1 | |||
|phase1_expression=0.181678379270557,1.49870366723688,0.704772020479856,0,0.446961094427288,2.61701557230111,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0.18611685633159,0.168776332241266,0.292311015483596,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306923946576125,0,0,1.53512174720011,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48335359146061,0,0,0.137836572484531,0,0,0.0852266274161009,3.20515328328254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17206543417515,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0.933118762985422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0.173624994933292,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,7.2231988256891,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04836000945218,0,0,0,0,0.290967049465258,0,2.48578814858586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.26134243307861,15.8120692568062,2.15361907373044,8.38651802095763,31.3335015139697,18.5232309676754,15.8552995068674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.2967738120809,20.5248510813284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,1.63205341010842,2.506898940227,1.53172788381731,3.27872630709804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.93937885422871,0,0,0,0,0,0,0,0,0,0,0.0657727735628491,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0.347716544605159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94228651156368,18.5819680409807,19.7168453327494,7.77137588894623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.37618785021362,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.514635022653,7.61806180683969,0,0,0,0.12729431655633,1.0105859447911,15.4578891006843,26.6941974846519,1.01028079521881,0.573777643141411,3.99192427855216,0,0,0,0,4.69281884806909,0,0,0,0.402547587182052,0 | |||
|short_description=p3@SGCG | |||
}} |
Latest revision as of 20:45, 16 September 2015
Short description: | p3@SGCG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SGCG_5end |
Coexpression cluster: | C20_heart_left_skeletal_diaphragm_tongue_umbilical_throat |
Association with transcript: | 0bp_to_ENST00000537476_5end |
EntrezGene: | SGCG |
HGNC: | 10809 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fat cell | 1.30e-12 | 15 |
perirenal adipocyte cell | 7.15e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
heart disease | 7.44e-13 | 2 |
vascular disease | 4.01e-07 | 1 |
ischemia | 4.01e-07 | 1 |
extrinsic cardiomyopathy | 4.01e-07 | 1 |
myocardial ischemia | 4.01e-07 | 1 |
myocardial infarction | 4.01e-07 | 1 |
cardiovascular system disease | 7.81e-07 | 4 |