FFCP PHASE1:Hg19::chr13:23489937..23489969,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=38473 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=147bp_to_ENST00000417358_5end | |||
|cluster_id=chr13:23489937..23489969,+ | |||
|description=CAGE_peak_1_at_NUS1P2_5end | |||
|id=chr13:23489937..23489969,+ | |||
|ontology_enrichment_celltype=CL:0000047!2.27e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0002322;2.97e-12;5!CL:0000064;2.04e-07;3!CL:0000067;2.04e-07;3!CL:0005012;2.04e-07;3!CL:0002304;2.04e-07;3!CL:0002319;4.04e-07;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,7.69e-13,5;CL:0000047,1.52e-10,8;CL:0000133,2.01e-08,59;CL:0000064,1.34e-07,3;CL:0000067,1.34e-07,3;CL:0005012,1.34e-07,3;CL:0002304,1.34e-07,3;CL:0002319,3.46e-07,25;CL:0000221,5.03e-07,72 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.85e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!1.58e-35!86;UBERON:0000073!5.47e-35!94;UBERON:0001016!5.47e-35!94;UBERON:0001017!1.44e-32!82;UBERON:0001049!5.01e-29!57;UBERON:0005068!5.01e-29!57;UBERON:0006241!5.01e-29!57;UBERON:0007135!5.01e-29!57;UBERON:0003056!9.69e-29!61;UBERON:0003075!3.51e-28!86;UBERON:0007284!3.51e-28!86;UBERON:0002616!1.51e-27!59;UBERON:0002780!7.78e-27!41;UBERON:0001890!7.78e-27!41;UBERON:0006240!7.78e-27!41;UBERON:0000955!3.50e-26!69;UBERON:0006238!3.50e-26!69;UBERON:0002346!6.18e-26!90;UBERON:0003080!7.37e-26!42;UBERON:0002020!1.24e-23!34;UBERON:0003528!1.24e-23!34;UBERON:0001893!1.88e-23!34;UBERON:0001869!7.45e-23!32;UBERON:0002791!1.15e-22!33;UBERON:0000153!5.50e-22!129;UBERON:0007811!5.50e-22!129;UBERON:0000033!6.67e-22!123;UBERON:0004121!2.25e-21!169;UBERON:0000956!1.96e-20!25;UBERON:0000203!1.96e-20!25;UBERON:0000924!3.15e-20!173;UBERON:0006601!3.15e-20!173;UBERON:0007023!1.83e-18!115;UBERON:0002619!3.85e-18!22;UBERON:0001950!2.31e-16!20;UBERON:0000475!2.44e-11!365;UBERON:0000481!3.88e-11!347;UBERON:0000483!1.29e-08!309;UBERON:0000119!1.46e-08!312;UBERON:0000064!2.39e-08!219;UBERON:0000922!4.24e-07!612;UBERON:0000200!5.08e-07!6;UBERON:0002021!8.49e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;5.43e-29;22!UBERON:0000956;2.61e-28;25!UBERON:0000203;2.61e-28;25!UBERON:0001950;3.59e-28;20!UBERON:0001869;5.87e-23;32!UBERON:0001893;4.80e-21;34!UBERON:0002791;6.25e-21;32!UBERON:0003528;3.22e-19;34!UBERON:0002020;3.22e-19;34!UBERON:0002780;1.39e-17;41!UBERON:0001890;1.39e-17;41!UBERON:0000073;1.07e-15;53!UBERON:0002616;1.07e-15;53!UBERON:0002021;1.89e-13;5!UBERON:0000955;8.50e-13;68!UBERON:0001017;2.56e-11;75!UBERON:0000200;8.55e-11;6!UBERON:0001016;2.36e-10;83!UBERON:0001870;1.15e-08;3!UBERON:0001872;1.35e-08;5!UBERON:0001778;2.04e-07;3!UBERON:0001775;2.04e-07;3!UBERON:0002104;2.56e-07;21!UBERON:0007625;4.12e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003056,3.23e-32,61;UBERON:0001017,6.73e-30,81;UBERON:0001016,1.51e-29,89;UBERON:0002619,1.03e-28,22;UBERON:0000956,5.42e-28,25;UBERON:0000203,5.42e-28,25;UBERON:0001950,6.92e-28,20;UBERON:0003075,4.02e-27,82;UBERON:0007284,4.02e-27,82;UBERON:0002780,3.92e-26,41;UBERON:0001890,3.92e-26,41;UBERON:0003080,3.92e-26,41;UBERON:0006240,3.92e-26,41;UBERON:0001869,9.19e-26,32;UBERON:0002346,2.05e-25,86;UBERON:0000073,4.98e-25,53;UBERON:0002616,4.98e-25,53;UBERON:0000955,1.01e-24,68;UBERON:0006238,1.01e-24,68;UBERON:0001893,5.85e-24,34;UBERON:0001049,2.61e-23,56;UBERON:0005068,2.61e-23,56;UBERON:0006241,2.61e-23,56;UBERON:0007135,2.61e-23,56;UBERON:0002791,2.70e-23,32;UBERON:0010371,2.34e-22,104;UBERON:0003528,1.19e-21,34;UBERON:0002020,1.19e-21,34;UBERON:0004121,1.95e-21,171;UBERON:0000924,1.95e-21,171;UBERON:0006601,1.95e-21,171;UBERON:0010314,1.87e-15,132;UBERON:0002021,1.43e-13,5;UBERON:0011216,4.83e-12,223;UBERON:0000200,1.67e-10,6;UBERON:0007023,1.54e-09,114;UBERON:0001870,1.38e-08,3;UBERON:0001872,1.52e-08,5;UBERON:0000019,1.24e-07,20;UBERON:0000047,1.24e-07,20;UBERON:0010312,1.24e-07,20;UBERON:0004088,1.24e-07,20;UBERON:0010230,1.24e-07,20;UBERON:0003072,1.24e-07,20;UBERON:0004128,1.24e-07,20;UBERON:0003071,1.24e-07,20;UBERON:0001778,1.34e-07,3;UBERON:0001775,1.34e-07,3;UBERON:0000970,3.43e-07,21;UBERON:0002104,3.43e-07,21;UBERON:0007625,4.15e-07,11;UBERON:0001456,8.59e-07,22 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61560529038394,0.204000691244253,0,2.0036519099174,0.684372125364421,0.87879847716362,0.916960868975415,0.656804715599566,0.708397031823113,0,0,0,0,0.90361775633475,0.739508020333575,0,0,0.587200878669695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32171328579026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.255725123687061,0,0,0,0,0,1.41802225746102,1.55210578223795,1.58102614247627,0.458426764241994,0,1.11235332835329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0.149448680551801,0,0.161872944368132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.80539524098069,1.85541675650079,1.85910308591229,2.90250954043037,2.27088765788066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0.171567810298526,0,0,0.100528972411631,0.833296006426766,0,1.03993478527958,0,0.695582429850461,1.17408694235822,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0.07333828582095,0.646358578788889,0,0,0,0,0.514414748524284,0,0,0,0.542621605391443,0,0,0,0,0,0,0.499864955910285,0,0,0,0,0,0,0,0.205476322550383,0.179060963239896,0,0,0,0,3.81141936333695,1.30139853857622,2.31986643833309,2.84777651068393,0.637938751653163,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,1.48418066444991,0,0,0.164254312027618,0,0,0,0.802025881213139,0.184161977871793,0,0,0,0,0.616122696835318,0.784349769176855,0,0.211103257785751,0,0,0,0,0.270946437543853,0.501689773854853,0.254876273045038,0,0,0,0,0.769350375349168,1.31205858279882,3.25378394664303,0.103041011647722,0,0,0.574265537996172,0,0,0.48335359146061,0.462145851343933,0.614014698904518,0,2.25582514223375,1.74020032697074,0.511359764496605,0.178064071293475,0.991709492165869,0.768760269460425,0.255225424989168,0.4046311234222,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0.42793898803392,0,0,0.179872457583315,0.54907405947211,0.471249609382746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.573645408816206,0.392996164052485,0,0,0,0,0,0,1.15466535270614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568272293612826,0,0,0,0,0.140669416410513,0,0,0,0.19924798825107,0,0,0,0.369254416383208,0,0,0,0,0.0986434056369336,0,0,4.84666373047609,1.57705766875147,3.99227596002388,0.7812832832557,0,0,0,15.7637263181515,0.709163045303809,1.03423011972439,0,0,0.885741385813839,0.361789315876224,1.52581736317083,4.64432891711143,3.25102380848902,0.658156191461918,0,0,0.307801034015188,0,0,0,0,0,0,0.533034776018635,0,0,4.15529204750391,0.225595660617181,0.19606253431774,0,0,0.794682894901893,0.421996129056054,0,0,0,0,0.619202951523374,1.22206028986725,0,0,0,0.067401132980677,0,0.234264445725339,0.547364367646998,0.586993856796269,0,0,0,2.14250933141343,0.063186579628488,1.20258735531594,1.03688191397247,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0.484945082442097,1.588610280447,0.451961481561065,0,0,2.46912104227927,0,0,0,0.599428828746391,2.59362750877391,3.89424426964113,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0,0,0,0,0,6.36183751847443,0.817220436669454,1.44677833618517,1.37539436597234,0.83088067605837,0.2249738915515,0.77380195455795,1.09349201984444,0,1.02447419488958,0.367182116944987,0,0.179287339332845,0,0,0,0,0,0,0,0,1.23138781124008,0,0,0.146552233678082,0,0.646414781807753,0.52893040697076,0,0,0.106787412567695,0.314408610199332,0,0,0.197611631897944,0,0,0,0.2506898940227,0,0,0.157054096250234,4.43034089983493,4.14889300666675,2.003054891304,0,0.110929051536852,0.124192805882767,1.66018361923477,0,0,0,0,9.83503302194451,1.59413131471908,0.149254802886874,0,0.554805861502613,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0.265841714557995,0,0.150257608997218,0,0,0,0.644463342254931,0,0,0,0,0,0,0,0,0,0.226705925512272,1.389134845943,0.244736704506468,0,0,2.63140859494449,0,0,0,0,0,0,2.07387654227596,0.194860308839388,0,1.79921933681429,0,0,0,0,0,0,0,0,0.139879507719444,0,3.83683113910955,0,0.786329709279482,0.109209638192014,0,0,0,0,0,0,0.80057074828547,0,0,1.15612605173627,4.25089728976755,2.87340946302872,2.46139637088906,5.5455773168778,2.48966108871184,2.26065903884592,1.42769420259154,0,1.29766695682514,0,0,0,1.3807198521202,0,1.35378591028663,0.80682027481408,0,0,0,0,1.14813893851271,3.90539049306924,2.48024155801421,1.20490039368423,5.4697480901822,0,0,0,0,3.74991285114801,4.03540466662589,1.82089681270989,0.682986574053893,0,0,0,0.815636795721981,0.72350050919134,1.41832609060762,0,0.470958557103084,0.314231179832004,0,0,0.863710364874486,2.38875843943525,0.428859265059938,0,0,0.347716544605159,0,0,0,0,0.430227358820278,0,0,0,1.60374807980835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,1.64973582971138,0.196308467114945,0,0,0,0.0939839179798536,0.193373663920732,0,0,0,0,0,0.917458566809082,0.286679166302903,0.315543124386369,0.951880862672806,0.872701380680755,0,0,0,0,0,0.327796715891087,0,0.509944148709909,0,0,0.50141507858475,0.606229585745915,1.07185652062471,0,0.310298987585686,0.426467963801962,0.476128862927481,0,0.0620747142958579,1.6819779387092,0.318235791390825,0.808468755832877,0,0.684466602170562,0.0673520530145875,0.358611026963382,1.66330178273007,0,0,0,0,0,0,1.62758471326295,0,0,0 | |||
|short_description=p1@NUS1P2 | |||
}} |
Latest revision as of 20:29, 16 September 2015
Short description: | p1@NUS1P2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NUS1P2_5end |
Coexpression cluster: | NA |
Association with transcript: | 147bp_to_ENST00000417358_5end |
EntrezGene: | NA |
HGNC: | 38473 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 7.69e-13 | 5 |
neuronal stem cell | 1.52e-10 | 8 |
neurectodermal cell | 2.01e-08 | 59 |
ciliated cell | 1.34e-07 | 3 |
ciliated epithelial cell | 1.34e-07 | 3 |
multi-ciliated epithelial cell | 1.34e-07 | 3 |
non-pigmented ciliary epithelial cell | 1.34e-07 | 3 |
neural cell | 3.46e-07 | 25 |
ectodermal cell | 5.03e-07 | 72 |