FFCP PHASE1:Hg19::chr13:114302498..114302542,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr13:114302498..114302542,+ | |||
|coexpression_cluster_id=C30 | |||
|description=CAGE_peak_at_chr13:114302498..114302542,+ | |||
|id=chr13:114302498..114302542,+ | |||
|ontology_enrichment_celltype=CL:0000242!1.22e-27!2;CL:0000312!1.15e-11!5;CL:0000240!7.10e-10!6;CL:0000311!7.10e-10!6;CL:0000079!7.10e-10!6;CL:0000237!7.10e-10!6;CL:0000036!7.10e-10!6;CL:0000357!7.10e-10!6;CL:0000114!7.10e-10!6;CL:0001014!6.58e-08!2;CL:0001016!6.58e-08!2;CL:0000362!1.27e-07!8;CL:0000095!7.49e-07!17;CL:0000123!7.49e-07!17 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0005754;5.12e-50;1!UBERON:0007123;1.81e-40;5!UBERON:0007297;8.10e-26;2 | |||
|ontology_enrichment_disease=DOID:3910!6.15e-08!2 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0006947!1.14e-18!3;UBERON:0004054!1.14e-18!3;UBERON:0000998!7.13e-15!1;UBERON:0006868!7.13e-15!1;UBERON:0001301!2.11e-14!1;UBERON:0005904!2.95e-14!4;UBERON:0002046!6.70e-12!5;UBERON:0004117!6.70e-12!5;UBERON:0007689!6.70e-12!5;UBERON:0007123!6.70e-12!5;UBERON:0003091!6.70e-12!5;UBERON:0000966!2.54e-11!5;UBERON:0005388!2.54e-11!5;UBERON:0001802!2.54e-11!5;UBERON:0000341!4.69e-08!2;UBERON:0001905!5.74e-08!2;UBERON:0002757!5.74e-08!2;UBERON:0010134!5.74e-08!2;UBERON:0002784!5.74e-08!2;UBERON:0005408!5.74e-08!2;UBERON:0001899!5.74e-08!2;UBERON:0004903!6.15e-08!2;UBERON:0002173!6.15e-08!2;UBERON:0002186!6.15e-08!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0000998;5.12e-50;1!UBERON:0006868;5.12e-50;1!UBERON:0002046;1.81e-40;5!UBERON:0006947;1.03e-17;3!UBERON:0004054;1.03e-17;3!UBERON:0005904;1.21e-13;4!UBERON:0000473;1.75e-07;8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000998,6.58e-50,1;UBERON:0006868,6.58e-50,1;UBERON:0002046,1.81e-40,5;UBERON:0004117,1.81e-40,5;UBERON:0007689,1.81e-40,5;UBERON:0007123,1.81e-40,5;UBERON:0003091,1.81e-40,5;UBERON:0009722,4.28e-19,11;UBERON:0007690,4.28e-19,11;UBERON:0006947,1.12e-17,3;UBERON:0004054,1.12e-17,3;UBERON:0005904,1.29e-13,4;UBERON:0008814,4.07e-12,18;UBERON:0002530,1.88e-08,59;UBERON:0000473,1.80e-07,8;UBERON:0000080,8.85e-07,9;UBERON:0002120,8.85e-07,9;UBERON:0004875,8.85e-07,9;UBERON:0005721,8.85e-07,9;UBERON:0005754,8.85e-07,9;UBERON:0007297,8.85e-07,9;UBERON:0002368,9.98e-07,35 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,1.72371686620732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,0.434763085832475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336283722218824,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0.158013611732727,0,0,0,0,0,0,0,0,0,1.69354820076372,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.714193294391221,0,0,0,2.41859201457027,16.3714923056158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr13:114302498..114302542,+ | |||
}} |
Latest revision as of 14:49, 24 July 2015
Short description: | p@chr13:114302498..114302542, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:114302498..114302542, + |
Coexpression cluster: | C30_thyroid_throat_mesothelioma_mucinous_trachea_chorionic_mesenchymal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
seminal vesicle | 6.58e-50 | 1 |
seminal fluid secreting gland | 6.58e-50 | 1 |
thyroid gland | 1.81e-40 | 5 |
pharyngeal pouch | 1.81e-40 | 5 |
thyroid diverticulum | 1.81e-40 | 5 |
pharyngeal pouch 2 | 1.81e-40 | 5 |
thyroid primordium | 1.81e-40 | 5 |
entire pharyngeal arch endoderm | 4.28e-19 | 11 |
early pharyngeal endoderm | 4.28e-19 | 11 |
male genital duct | 1.12e-17 | 3 |
internal male genitalia | 1.12e-17 | 3 |
duct of male reproductive system | 1.29e-13 | 4 |
pharyngeal arch system | 4.07e-12 | 18 |
gland | 1.88e-08 | 59 |
testis | 1.80e-07 | 8 |
mesonephros | 8.85e-07 | 9 |
pronephros | 8.85e-07 | 9 |
nephrogenic cord | 8.85e-07 | 9 |
pronephric mesoderm | 8.85e-07 | 9 |
rostral part of nephrogenic cord | 8.85e-07 | 9 |
presumptive pronephric mesoderm | 8.85e-07 | 9 |
endocrine gland | 9.98e-07 | 35 |