FFCP PHASE1:Hg19::chr13:111837368..111837380,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8874 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15607 | |||
|TSSclassifier=strong | |||
|UniProt=C9JDI6 | |||
|association_with_transcript=83bp_to_ENST00000467053_5end | |||
|cluster_id=chr13:111837368..111837380,+ | |||
|description=CAGE_peak_27_at_ARHGEF7_5end | |||
|id=chr13:111837368..111837380,+ | |||
|ontology_enrichment_celltype=CL:0000945!3.35e-42!24;CL:0000826!3.35e-42!24;CL:0000542!3.21e-41!53;CL:0000051!3.21e-41!53;CL:0000838!1.42e-38!52;CL:0000236!1.08e-20!14;CL:0002087!9.07e-19!119;CL:0000738!1.22e-17!140;CL:0000037!3.21e-15!172;CL:0000566!3.21e-15!172;CL:0000988!5.94e-14!182;CL:0002031!1.32e-13!124;CL:0002032!1.08e-12!165;CL:0000837!1.08e-12!165;CL:0000817!4.16e-12!3;CL:0000785!1.55e-08!2;CL:0000955!1.55e-08!2;CL:0000818!1.55e-08!2;CL:0000954!1.55e-08!2;CL:0000816!1.55e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0000945;1.15e-30;24!CL:0000542;4.13e-18;53!CL:0000817;1.78e-16;1!CL:0000236;3.50e-11;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.61e-30,24;CL:0000826,1.61e-30,24;CL:0000542,1.65e-22,53;CL:0000051,1.65e-22,53;CL:0000838,3.91e-18,52;CL:0000236,2.24e-10,14;CL:0000738,3.31e-10,136;CL:0002087,7.32e-10,115;CL:0000037,4.42e-08,168;CL:0000988,1.28e-07,177;CL:0002031,2.04e-07,120;CL:0002032,8.30e-07,161;CL:0000837,8.30e-07,161 | |||
|ontology_enrichment_development_v019=CL:0000051;4.13e-18;53!UBERON:0005425;1.78e-16;1 | |||
|ontology_enrichment_disease=DOID:0060058!7.45e-18!10;DOID:2531!1.40e-09!51;DOID:0060083!1.40e-09!51 | |||
|ontology_enrichment_disease_v019=DOID:0060058;8.69e-25;10!DOID:12603;1.78e-16;1!DOID:2531;4.09e-07;51!DOID:0060083;4.09e-07;51 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,9.83e-25,10;DOID:12603,1.04e-16,1;DOID:2531,3.05e-14,51;DOID:0060083,3.05e-14,51 | |||
|ontology_enrichment_uberon=UBERON:0004177!3.44e-13!7;UBERON:0002106!3.22e-11!3;UBERON:0004854!3.22e-11!3;UBERON:0009034!3.22e-11!3;UBERON:0002095!3.22e-11!3;UBERON:0004782!3.22e-11!3;UBERON:0003281!3.22e-11!3;UBERON:0009664!3.22e-11!3;UBERON:0002296!3.22e-11!3;UBERON:0005602!3.22e-11!3;UBERON:0001179!3.22e-11!3;UBERON:0006293!3.22e-11!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002370;1.08e-31;2!UBERON:0005058;1.08e-31;2!UBERON:0009113;1.08e-31;2!UBERON:0000941;1.78e-16;1!UBERON:0001785;1.78e-16;1!UBERON:0002464;1.78e-16;1!UBERON:0004904;1.78e-16;1!UBERON:0001021;1.78e-16;1!UBERON:0004177;2.60e-13;5!UBERON:0005057;2.60e-13;5!UBERON:0003714;6.67e-09;2!UBERON:0005162;6.67e-09;2!UBERON:0000122;6.67e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.21e-16,1;UBERON:0001785,1.21e-16,1;UBERON:0002464,1.21e-16,1;UBERON:0004904,1.21e-16,1;UBERON:0001021,1.21e-16,1;UBERON:0003902,1.21e-16,1;UBERON:0005425,1.21e-16,1;UBERON:0002370,1.93e-16,4;UBERON:0005058,1.93e-16,4;UBERON:0009113,1.93e-16,4;UBERON:0003295,1.93e-16,4;UBERON:0005562,1.93e-16,4;UBERON:0003351,2.76e-11,6;UBERON:0004177,8.35e-10,7;UBERON:0005057,8.35e-10,7;UBERON:0003714,5.49e-09,2;UBERON:0005162,5.49e-09,2;UBERON:0000122,5.49e-09,2;UBERON:0000974,4.01e-07,10;UBERON:0003408,4.01e-07,10;UBERON:0001042,4.01e-07,10;UBERON:0009145,4.01e-07,10 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.916960868975415,0.656804715599566,1.10195093839151,0,0.383829398097213,0,0,0,0,3.64095842727418,2.13253848731132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.66852776159066,0.853460445133014,0.800791974072025,0.574752439954483,0,0,1.1384259382189,0,0.764546456250458,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201606743224732,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.715471872916026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32438929824395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.128343036279748,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,1.67222857613147,1.00988449083511,0.284567373393656,0,0,0,0,0,0,0.456469358066384,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0.984678443688556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.06579894587209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.729819156862664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.686379991447858,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25426853765475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09613338542806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.576169937778896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.905777061400041,0,0,0,0,0,0,0,0,0,0.187967835959707,0.386747327841463,0.299823467774787,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.476128862927481,1.42095601639213,4.15900585782248,0,0.0636471582781649,0,0,0,0.26940821205835,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0 | |||
|short_description=p27@ARHGEF7 | |||
}} |
Latest revision as of 14:01, 16 September 2015
Short description: | p27@ARHGEF7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_27_at_ARHGEF7_5end |
Coexpression cluster: | NA |
Association with transcript: | 83bp_to_ENST00000467053_5end |
EntrezGene: | ARHGEF7 |
HGNC: | 15607 |
UniProt: | C9JDI6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.61e-30 | 24 |
pro-B cell | 1.61e-30 | 24 |
lymphocyte | 1.65e-22 | 53 |
common lymphoid progenitor | 1.65e-22 | 53 |
lymphoid lineage restricted progenitor cell | 3.91e-18 | 52 |
B cell | 2.24e-10 | 14 |
leukocyte | 3.31e-10 | 136 |
nongranular leukocyte | 7.32e-10 | 115 |
hematopoietic stem cell | 4.42e-08 | 168 |
hematopoietic cell | 1.28e-07 | 177 |
hematopoietic lineage restricted progenitor cell | 2.04e-07 | 120 |
hematopoietic oligopotent progenitor cell | 8.30e-07 | 161 |
hematopoietic multipotent progenitor cell | 8.30e-07 | 161 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.21e-16 | 1 |
cranial nerve | 1.21e-16 | 1 |
nerve trunk | 1.21e-16 | 1 |
nerve connecting eye with brain | 1.21e-16 | 1 |
nerve | 1.21e-16 | 1 |
retinal neural layer | 1.21e-16 | 1 |
presumptive neural retina | 1.21e-16 | 1 |
thymus | 1.93e-16 | 4 |
hemolymphoid system gland | 1.93e-16 | 4 |
thymic region | 1.93e-16 | 4 |
pharyngeal gland | 1.93e-16 | 4 |
thymus primordium | 1.93e-16 | 4 |
pharyngeal epithelium | 2.76e-11 | 6 |
hemopoietic organ | 8.35e-10 | 7 |
immune organ | 8.35e-10 | 7 |
neural tissue | 5.49e-09 | 2 |
multi cell component structure | 5.49e-09 | 2 |
neuron projection bundle | 5.49e-09 | 2 |
neck | 4.01e-07 | 10 |
gland of gut | 4.01e-07 | 10 |
chordate pharynx | 4.01e-07 | 10 |
pharyngeal region of foregut | 4.01e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 9.83e-25 | 10 |
acute leukemia | 1.04e-16 | 1 |
hematologic cancer | 3.05e-14 | 51 |
immune system cancer | 3.05e-14 | 51 |