FFCP PHASE1:Hg19::chr12:95942538..95942549,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84101 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20064 | |||
|TSSclassifier=strong | |||
|UniProt=F8VVD6 | |||
|association_with_transcript=24bp_to_ENST00000549639_5end | |||
|cluster_id=chr12:95942538..95942549,- | |||
|coexpression_cluster_id=C49 | |||
|description=CAGE_peak_7_at_USP44_5end | |||
|id=chr12:95942538..95942549,- | |||
|ontology_enrichment_celltype=CL:0002322!7.56e-21!5;CL:0002622!3.37e-12!3 | |||
|ontology_enrichment_celltype_v019=CL:0002322;1.69e-109;5!CL:0002321;7.44e-37;15!CL:0000148;1.52e-20;10!CL:0000540;1.17e-15;6!CL:0000404;1.17e-15;6!CL:0000147;6.83e-15;14!CL:0000710;1.25e-10;20!CL:0000075;4.94e-08;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,2.37e-109,5;CL:0000148,1.79e-20,10;CL:0000541,1.79e-20,10;CL:0000540,9.74e-16,6;CL:0000031,9.74e-16,6;CL:0000404,9.74e-16,6;CL:0000147,7.69e-15,14;CL:0000047,4.67e-12,8;CL:0000710,1.36e-10,20;CL:0000133,3.14e-09,59;CL:0000075,5.24e-08,27;CL:0000221,1.26e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000031;1.17e-15;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;4.10e-23;1!DOID:4549;4.10e-23;1!DOID:5861;4.10e-23;1!DOID:6496;4.10e-23;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,5.13e-23,1;DOID:4549,5.13e-23,1;DOID:5861,5.13e-23,1;DOID:6496,5.13e-23,1 | |||
|ontology_enrichment_uberon=UBERON:0005743!5.24e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0002418;1.30e-08;3!UBERON:0004755;1.30e-08;3!UBERON:0000922;9.75e-07;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002418,1.40e-08,3;UBERON:0004755,1.40e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236482229888585,0.344745680736619,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163461903113459,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.26907971453584,1.59035721985782,3.48581828608555,1.14027160516907,2.01856680700503,1.45990943630332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.459257792658427,0.182091168006717,0.393373244878272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142283686696828,0.159426272728822,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485442086998054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.60129367765797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1473296469895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0.279282401272254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,2.06309154895851,1.66176135211674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574647645245373,0,0,0,0,0,0.13223260174269,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0,0,0,0.110929051536852,0,0.276697269872462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0.464965701472501,0,0.801711364730253,0,0,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0.196308467114945,0,0,0,0.0939839179798536,0,0,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0.98339014767326,0,0.407955318967927,0.26721740526556,0,0.50141507858475,0,0,0,0,0.213233981900981,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,0,0.213454691755431,0,0,0,0,0,0,0,0 | |||
|short_description=p7@USP44 | |||
}} |
Latest revision as of 02:37, 16 September 2015
Short description: | p7@USP44 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_USP44_5end |
Coexpression cluster: | C49_H9_iPS_testicular_HES3GFP_teratocarcinoma_hepatoblastoma_choriocarcinoma |
Association with transcript: | 24bp_to_ENST00000549639_5end |
EntrezGene: | USP44 |
HGNC: | 20064 |
UniProt: | F8VVD6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 2.37e-109 | 5 |
melanocyte | 1.79e-20 | 10 |
melanoblast | 1.79e-20 | 10 |
neuron | 9.74e-16 | 6 |
neuroblast | 9.74e-16 | 6 |
electrically signaling cell | 9.74e-16 | 6 |
pigment cell | 7.69e-15 | 14 |
neuronal stem cell | 4.67e-12 | 8 |
neurecto-epithelial cell | 1.36e-10 | 20 |
neurectodermal cell | 3.14e-09 | 59 |
columnar/cuboidal epithelial cell | 5.24e-08 | 27 |
ectodermal cell | 1.26e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
cartilage tissue | 1.40e-08 | 3 |
skeletal tissue | 1.40e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 5.13e-23 | 1 |
extraosseous chondrosarcoma | 5.13e-23 | 1 |
myxoid chondrosarcoma | 5.13e-23 | 1 |
extraskeletal myxoid chondrosarcoma | 5.13e-23 | 1 |