FFCP PHASE1:Hg19::chr12:71550026..71550031,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:71550026..71550031,- | |||
|description=CAGE_peak_at_chr12:71550026..71550031,- | |||
|id=chr12:71550026..71550031,- | |||
|ontology_enrichment_celltype=CL:0002150!3.07e-09!3;CL:0000861!3.07e-09!3 | |||
|ontology_enrichment_celltype_v019=CL:0000167;2.30e-11;1!CL:0000164;2.30e-11;1!CL:0000502;2.30e-11;1!CL:0000172;2.30e-11;1!CL:0000173;2.30e-11;1!CL:0002553;4.22e-11;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,2.42e-11,1;CL:0000164,2.42e-11,1;CL:0000502,2.42e-11,1;CL:0000172,2.42e-11,1;CL:0000173,2.42e-11,1;CL:0002351,2.42e-11,1;CL:0002553,2.96e-11,1 | |||
|ontology_enrichment_development_v019=CL:0002351;2.30e-11;1!UBERON:0000358;2.30e-11;1!UBERON:0001045;4.22e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;2.30e-11;1!DOID:10165;2.30e-11;1!DOID:1798;2.30e-11;1!DOID:4430;2.30e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,1.97e-11,1;DOID:10165,1.97e-11,1;DOID:1798,1.97e-11,1;DOID:4430,2.42e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0005409!1.27e-19!35;UBERON:0000160!9.81e-18!27;UBERON:0000059!1.15e-12!11;UBERON:0004907!7.40e-10!5;UBERON:0004921!7.60e-10!129;UBERON:0004185!7.60e-10!129;UBERON:0001155!4.26e-08!9;UBERON:0001007!7.63e-08!155;UBERON:0001555!7.63e-08!155;UBERON:0007026!7.63e-08!155;UBERON:0004119!2.70e-07!169;UBERON:0000925!2.70e-07!169;UBERON:0006595!2.70e-07!169;UBERON:0001052!2.74e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0005409;7.76e-42;22!UBERON:0000160;1.61e-34;17!UBERON:0004921;3.44e-24;33!UBERON:0000059;1.02e-22;11!UBERON:0004907;1.06e-18;5!UBERON:0002108;1.57e-18;4!UBERON:0001052;3.46e-11;4!UBERON:0001154;4.22e-11;1!UBERON:0001153;4.22e-11;1!UBERON:0002171;4.22e-11;1!UBERON:0009854;4.22e-11;1!UBERON:0006518;4.22e-11;1!UBERON:0008949;4.22e-11;1!UBERON:0000101;4.22e-11;1!UBERON:0002167;4.22e-11;1!UBERON:0001155;1.58e-10;9!UBERON:0001555;5.61e-10;54!UBERON:0000945;6.57e-09;5!UBERON:0010039;6.57e-09;5!UBERON:0000922;3.97e-08;49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005409,6.88e-37,25;UBERON:0000160,1.29e-34,17;UBERON:0000059,9.31e-23,11;UBERON:0004907,1.09e-18,5;UBERON:0002108,1.31e-18,4;UBERON:0001052,3.64e-11,4;UBERON:0001154,4.01e-11,1;UBERON:0001153,4.01e-11,1;UBERON:0001045,4.01e-11,1;UBERON:0002171,5.43e-11,1;UBERON:0006518,5.43e-11,1;UBERON:0008949,5.43e-11,1;UBERON:0000101,5.43e-11,1;UBERON:0002167,5.43e-11,1;UBERON:0001155,1.43e-10,9;UBERON:0004921,3.33e-10,118;UBERON:0001007,5.67e-08,145;UBERON:0001555,5.67e-08,145;UBERON:0007026,5.67e-08,145;UBERON:0004119,4.68e-07,160;UBERON:0000925,4.68e-07,160;UBERON:0006595,4.68e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112611480483322,0,0,0,0,0,0,0,0.12663051166458,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737930631258681,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,1.30139853857622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0,0.483437798366489,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.876901770507525,0,0,0,0,0,0,0,0,0,0,0.329294892959902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935702702041099,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38141957765574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0,0,0,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0.995261931078505,1.59223616106011,12.2206028986725,0,0,0.104421949505455,0,0.802577647298789,0,0,0,0,0,21.7783288887595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.967563312890852,0.219267951258557,0.656923656425674,0,0,0,0,0,0,0,0,0.85381197895741,0,1.15272333723285,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0.0674035438541849,0.295282444544246,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.62280471891892,0,0.146552233678082,0,0,0.13223260174269,0,0,0,0,1.24271716604159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0.226705925512272,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0.314531883711793,0,0,0,17.2270712320013,0,0,0,1.60114149657094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,2.88097363929565,0,0.147856086217045,0.0675375846183947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111231401892069,0.156986185701028,0,3.64353812307926,7.30526976407596,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.098150233615243,1.34109717480496,0,0,0,0,0.233939463462106,0,0,0,0,0,1.54348316215889,2.62271472604749,0,0,2.59244201811789,0.196308467114945,0,0.4226557275834,0,0,0,0,0,0,0,3.65168194123259,0,0,0,0,0,3.7031878836078,0,0,0,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286888821570705,0.332660356546013,0,0,0,0.898252021065869,2.34640942403454,0.122241444182866,0,0,0.201273793591026,0 | |||
|short_description=p@chr12:71550026..71550031,- | |||
}} |
Latest revision as of 12:10, 24 July 2015
Short description: | p@chr12:71550026..71550031, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:71550026..71550031, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 2.42e-11 | 1 |
enteroendocrine cell | 2.42e-11 | 1 |
type D enteroendocrine cell | 2.42e-11 | 1 |
somatostatin secreting cell | 2.42e-11 | 1 |
pancreatic D cell | 2.42e-11 | 1 |
progenitor cell of endocrine pancreas | 2.42e-11 | 1 |
lung fibroblast | 2.96e-11 | 1 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system | 6.88e-37 | 25 |
intestine | 1.29e-34 | 17 |
large intestine | 9.31e-23 | 11 |
lower digestive tract | 1.09e-18 | 5 |
small intestine | 1.31e-18 | 4 |
rectum | 3.64e-11 | 4 |
vermiform appendix | 4.01e-11 | 1 |
caecum | 4.01e-11 | 1 |
midgut | 4.01e-11 | 1 |
lower lobe of right lung | 5.43e-11 | 1 |
right lung lobe | 5.43e-11 | 1 |
lower lobe of lung | 5.43e-11 | 1 |
lobe of lung | 5.43e-11 | 1 |
right lung | 5.43e-11 | 1 |
colon | 1.43e-10 | 9 |
subdivision of digestive tract | 3.33e-10 | 118 |
digestive system | 5.67e-08 | 145 |
digestive tract | 5.67e-08 | 145 |
primitive gut | 5.67e-08 | 145 |
endoderm-derived structure | 4.68e-07 | 160 |
endoderm | 4.68e-07 | 160 |
presumptive endoderm | 4.68e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 1.97e-11 | 1 |
endocrine pancreas cancer | 1.97e-11 | 1 |
pancreatic endocrine carcinoma | 1.97e-11 | 1 |
somatostatinoma | 2.42e-11 | 1 |