FFCP PHASE1:Hg19::chr12:6484306..6484392,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4055 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6718 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000542830_5end | |||
|cluster_id=chr12:6484306..6484392,+ | |||
|coexpression_cluster_id=C3316 | |||
|description=CAGE_peak_4_at_LTBR_5end | |||
|id=chr12:6484306..6484392,+ | |||
|ontology_enrichment_celltype=CL:0000066!9.49e-16!254;CL:0002076!7.62e-11!43;CL:0000223!1.56e-10!59 | |||
|ontology_enrichment_celltype_v019=CL:0002076;1.60e-07;42!CL:1000507;3.66e-07;10!CL:1000494;3.66e-07;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.14e-13,253;CL:0002076,1.02e-09,42;CL:0000223,2.28e-08,58;CL:1000507,4.54e-07,10;CL:1000494,4.54e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:305!5.08e-10!106;DOID:0050687!7.67e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,8.51e-09,106 | |||
|ontology_enrichment_uberon=UBERON:0004119!6.56e-20!169;UBERON:0000925!6.56e-20!169;UBERON:0006595!6.56e-20!169;UBERON:0004921!1.35e-16!129;UBERON:0004185!1.35e-16!129;UBERON:0000464!2.88e-15!104;UBERON:0000466!4.52e-15!126;UBERON:0001007!4.76e-15!155;UBERON:0001555!4.76e-15!155;UBERON:0007026!4.76e-15!155;UBERON:0005177!2.28e-14!107;UBERON:0000077!5.37e-14!130;UBERON:0000481!4.02e-11!347;UBERON:0001041!3.17e-10!98;UBERON:0003104!1.77e-09!238;UBERON:0009142!1.77e-09!238;UBERON:0001008!5.75e-09!45;UBERON:0005911!5.84e-09!82;UBERON:0005178!7.49e-09!34;UBERON:0002224!7.49e-09!34;UBERON:0006554!1.22e-08!44;UBERON:0000160!2.08e-08!27;UBERON:0005181!2.48e-08!35;UBERON:0005153!3.45e-08!37;UBERON:0000922!5.39e-08!612;UBERON:0009569!5.74e-08!113;UBERON:0002553!6.23e-08!70;UBERON:0001048!7.32e-08!168;UBERON:0001004!1.12e-07!72;UBERON:0002048!1.27e-07!22;UBERON:0000117!1.27e-07!22;UBERON:0000171!1.27e-07!22;UBERON:0000170!1.27e-07!22;UBERON:0005597!1.27e-07!22;UBERON:0000118!1.27e-07!22;UBERON:0000062!1.94e-07!511;UBERON:0005409!2.07e-07!35;UBERON:0000063!2.33e-07!97;UBERON:0003135!2.99e-07!11;UBERON:0000468!5.56e-07!659;UBERON:0000065!8.58e-07!53 | |||
|ontology_enrichment_uberon_v019=UBERON:0006554;1.18e-10;30!UBERON:0001008;1.18e-10;30!UBERON:0003135;3.25e-10;11!UBERON:0005178;1.83e-09;34!UBERON:0002224;1.83e-09;34!UBERON:0003101;4.97e-09;22!UBERON:0000079;4.97e-09;22!UBERON:0004921;2.39e-08;33!UBERON:0001041;3.47e-08;14!UBERON:0005181;6.61e-08;35!UBERON:0002048;3.64e-07;22!UBERON:0000117;3.64e-07;22!UBERON:0000171;3.64e-07;22!UBERON:0000170;3.64e-07;22!UBERON:0004211;3.66e-07;10!UBERON:0009773;3.66e-07;10!UBERON:0001231;3.66e-07;10!UBERON:0004810;3.66e-07;10!UBERON:0000473;6.87e-07;8!UBERON:0002113;7.32e-07;24!UBERON:0011143;7.32e-07;24!UBERON:0000489;7.54e-07;29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001008,2.63e-15,48;UBERON:0005177,3.05e-15,101;UBERON:0004119,3.36e-15,160;UBERON:0000925,3.36e-15,160;UBERON:0006595,3.36e-15,160;UBERON:0006554,8.35e-15,47;UBERON:0004921,1.23e-12,118;UBERON:0001007,1.17e-10,145;UBERON:0001555,1.17e-10,145;UBERON:0007026,1.17e-10,145;UBERON:0003135,2.74e-10,11;UBERON:0005178,3.16e-10,34;UBERON:0002224,3.16e-10,34;UBERON:0005181,9.42e-10,35;UBERON:0005153,3.70e-09,37;UBERON:0003101,4.61e-09,22;UBERON:0000079,4.61e-09,22;UBERON:0001041,1.01e-08,87;UBERON:0002113,1.79e-08,26;UBERON:0003918,1.79e-08,26;UBERON:0011143,1.79e-08,26;UBERON:0005095,1.79e-08,26;UBERON:0007687,1.79e-08,26;UBERON:0000489,2.24e-08,31;UBERON:0005911,4.23e-08,82;UBERON:0002553,5.89e-08,61;UBERON:0009569,7.66e-08,112;UBERON:0005156,1.77e-07,59;UBERON:0000990,1.77e-07,59;UBERON:0002048,3.03e-07,22;UBERON:0000117,3.03e-07,22;UBERON:0000171,3.03e-07,22;UBERON:0000170,3.03e-07,22;UBERON:0005597,3.03e-07,22;UBERON:0000118,3.03e-07,22;UBERON:0001004,4.52e-07,74;UBERON:0004810,4.54e-07,10;UBERON:0000473,5.65e-07,8 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0.893922188854576,0.872338524100369,0,0,0,1.47440361900905,3.48900583986214,18.1306338868043,25.3216299099315,3.21792517696121,9.27912652038164,0,0,0,0,0.861847406537515,1.83600622119828,0.626909442956176,0.286235987131057,0.821246550437305,0.125542639594803,0,0,0,0,0,0,2.75826367343678,2.10844143144775,2.58827807116751,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,1.34140171940727,0.255725123687061,0,0.50133791063589,0.144846518960824,0,0,1.98523116044542,1.10864698731282,1.14185221401064,2.16115474571226,1.09288586487763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0892997282840798,0,0,0,0,0,0,0,1.3082821564276,0,0,0,0.286836620748814,0,0,0,0,0.933633106199299,0,0,1.36221684880438,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974370051611986,0,0.0920498986422993,0,0,0,0,0,0,0.286804595389004,1.34171076742555,0.397589304964456,1.62671520017326,1.0366105501537,1.26160425437814,2.55484151353081,0,0,0,1.85747171212792,0,0,0,0,0,0,0,0.134831308160164,0.392442930250692,0,0,0,0.4115740113314,1.47008711385542,0,0,0.590789906681404,0,4.05861847192275,1.3725424823882,0,2.24803506515239,0.100528972411631,0.740707561268237,0,0,0,0.463721619900307,0.70445216541493,0,0,0,0,0.858486162094873,0,0,0,0,0,0,4.92571874865666,1.74380363108377,2.68367875415648,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0.560655421726804,0,0,0,3.57656445851882,0,0,0,0.514414748524284,0,0.266422179016099,1.57275793023962,5.96883765930587,0.823240336780769,0,1.06617584622764,0,0.904318131178758,0.871533458600294,0,0,0,0,0,0,0,0,0.410952645100767,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,5.5211171273613,4.00136416847742,1.35632511849868,0,0,0,0,1.80567659836631,0,1.03473071292505,0,0.184369168541703,0,1.56640925970192,0,0,0,0,5.15316871458641,19.9722527412596,16.9338564264621,0.496215615637554,0.153461973288062,0,0,0,0,1.48418066444991,0,0,0,0,0,2.05461064305758,3.20810352485256,2.20994373446151,0,0,0,2.70719767744447,1.23224539367064,1.56869953835371,1.46139224653261,0.844413031143006,0,0,0,0,2.70946437543853,3.01013864312912,3.05851527654046,3.3243040357149,2.0148727924996,0,0,0.769350375349168,0.656029291399411,0.650756789328606,0.721287081534056,0,0.082509499920588,0,0,0,0.096670718292122,0.308097234229289,0.460511024178389,0.137836572484531,0.751941714077915,0.580066775656914,0,0.178064071293475,0.661139661443912,2.69066094311149,8.29482631214797,0.30347334256665,0,0,0,0,0,0,0,0,1.48863347743867,0,0.38126038784765,0,1.28381696410176,0,0,0.359744915166629,0.274537029736055,0.471249609382746,0,0,0,1.46290121726877,0,0,0,0,0,0,0,0,1.15755106853338,0,0,0,0,0,0.687743287091848,0.35667105148125,0,0.422215270595328,0,0.379473173765715,0,0.673554789078584,2.68120910214315,0,0.941438007767792,1.29151611801369,3.36942951335251,1.7737206141467,3.44585100310439,0,0,0,0,0,0,0,0,5.34120355637366,11.5497582631603,3.18552280775341,0,0,0,0,0,0,0.211673582723883,0,0,0,0,2.50634477090067,0.338583555603207,0,0,0,0,0,0,0,0,0.278406173895242,0,0,1.33228787199128,2.81974010175699,1.12284324244932,0.146508179271894,0.121360521749513,0,3.40963376167696,7.87856799634377,0.593929361665277,2.45728561679386,0,0,0,0,6.96713846822378,1.59398390600856,0.276283915531148,0,0.920418142519393,0,0,0,1.79021174675609,0,5.62267412130522,0,0,0,0,0,0,0,1.44999915086959,5.12070517284748,3.30529745380596,4.49136595359079,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0.21787692703798,0,2.00070672109872,0,0,0.359030577639089,0.108647371922008,1.5950057986596,0.0915975934018623,1.5991043280559,0,0.156980256395025,0,0,0,0,0,0,1.47698645169619,3.4278889713421,1.13082457147153,0.432777279484182,7.96209544862804,1.23840590304675,4.888241159469,0,0.247127877893006,0.104421949505455,0.134802265961354,0,0,0,3.52196314077761,28.6480847850229,13.4158696968793,1.20990716048664,0,2.46427660551103,0,0,0,0.661983911750998,0.627865836814451,5.97362148864794,1.13843818411917,0.277349346026277,5.0332324117188,3.62571870433197,0.261177619741208,5.2418000472609,0,0,0,0,4.84945082442097,1.94163478721301,2.71176888936639,0,0,0,14.0796995569058,0,2.77488893161158,0,4.46680293177729,0,0,0,0,5.89235086541989,0.271808412147228,0.209205692624666,0.101998217636322,0,0,0,0,0,0,0,0,0.717873024576814,1.99679000498991,0,0,0.201550417460179,0,0,0.236349546921671,0.247247575143499,0.471824806979294,0.295282444544246,0,0,0,1.28602518772015,1.92555211236127,3.32352270423348,0,0,0,0.670869375198532,5.43759380364467,1.46872846777995,0.105600336519406,0.179287339332845,0,0.714695326373367,0,1.27134268827375,0,0,0,0,0,0.340776043570843,0.339936274560377,0,0,0,0,0.342173675768659,10.5722253347501,3.52398461473392,4.71612915298998,13.6698888264575,0,0,0,0,0,0,0,0,3.61224421375539,0,0,0,5.73409195690071,1.10929051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| |||
|short_description=p4@LTBR | |||
}} |
Latest revision as of 20:41, 19 September 2015
Short description: | p4@LTBR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LTBR_5end |
Coexpression cluster: | C3316_Amniotic_seminal_ductal_ductus_lung_tubular_Placental |
Association with transcript: | 0bp_to_ENST00000542830_5end |
EntrezGene: | LTBR |
HGNC: | 6718 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.14e-13 | 253 |
endo-epithelial cell | 1.02e-09 | 42 |
endodermal cell | 2.28e-08 | 58 |
kidney tubule cell | 4.54e-07 | 10 |
nephron tubule epithelial cell | 4.54e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 8.51e-09 | 106 |