FFCP PHASE1:Hg19::chr12:47053880..47053887,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:47053880..47053887,+ | |||
|coexpression_cluster_id=C514 | |||
|description=CAGE_peak_at_chr12:47053880..47053887,+ | |||
|id=chr12:47053880..47053887,+ | |||
|ontology_enrichment_celltype=CL:0002139!1.24e-23!24;CL:0000115!2.23e-22!35;CL:0002078!6.31e-18!44;CL:0000071!1.00e-16!18;CL:0002546!1.00e-16!18;CL:0000213!3.37e-13!57;CL:0000215!3.37e-13!57;CL:0000222!1.23e-09!119;CL:0005020!1.39e-08!6;CL:0002138!1.39e-08!6;CL:0005022!1.39e-08!6;CL:1000413!5.17e-07!9;CL:0002543!7.35e-07!6 | |||
|ontology_enrichment_celltype_v019=CL:0002139;9.19e-35;24!CL:0000115;6.12e-26;36!CL:0002138;4.30e-24;6!CL:0002078;8.23e-19;45!CL:0000071;8.59e-17;18!CL:0000213;1.72e-14;58!CL:0000215;1.72e-14;58!CL:0002144;1.18e-12;3!CL:0002188;8.91e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,7.16e-35,24;CL:0000115,9.43e-33,36;CL:0002078,8.05e-26,45;CL:0005020,3.41e-24,6;CL:0002138,3.41e-24,6;CL:0005022,3.41e-24,6;CL:0000213,1.34e-19,58;CL:0000215,1.34e-19,58;CL:0000071,7.91e-17,18;CL:0002546,7.91e-17,18;CL:0002144,1.50e-12,3;CL:0000222,2.32e-08,121;CL:0002188,1.02e-07,5 | |||
|ontology_enrichment_development_v019=CL:0005022;4.30e-24;6!CL:0002546;8.59e-17;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!8.23e-21!79;UBERON:0007798!8.23e-21!79;UBERON:0000055!7.28e-20!69;UBERON:0004535!7.30e-20!110;UBERON:0001009!5.63e-19!113;UBERON:0004872!2.58e-18!84;UBERON:0001986!1.00e-16!18;UBERON:0004638!1.00e-16!18;UBERON:0004852!1.00e-16!18;UBERON:0001981!6.26e-16!60;UBERON:0007500!6.26e-16!60;UBERON:0004537!6.26e-16!60;UBERON:0006965!6.26e-16!60;UBERON:0000487!7.23e-15!22;UBERON:0003914!1.28e-13!118;UBERON:0006914!1.45e-12!25;UBERON:0001637!7.87e-11!42;UBERON:0003509!7.87e-11!42;UBERON:0004572!7.87e-11!42;UBERON:0003081!3.02e-09!216;UBERON:0003915!5.17e-07!9;UBERON:0004700!5.17e-07!9;UBERON:0001917!5.17e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;3.87e-18;8!UBERON:0004536;3.87e-18;8!UBERON:0006558;3.87e-18;8!UBERON:0004638;8.59e-17;18!UBERON:0001986;8.59e-17;18!UBERON:0004852;8.59e-17;18!UBERON:0002465;1.48e-14;10!UBERON:0000487;1.15e-13;22!UBERON:0010523;1.18e-12;3!UBERON:0001915;1.18e-12;3!UBERON:0001982;1.18e-12;3!UBERON:0006914;5.64e-12;25!UBERON:0000055;3.51e-10;65!UBERON:0000490;2.49e-09;33!UBERON:0002049;4.38e-08;75!UBERON:0007798;4.38e-08;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,3.26e-18,8;UBERON:0004536,3.26e-18,8;UBERON:0006558,3.26e-18,8;UBERON:0004638,7.91e-17,18;UBERON:0001986,7.91e-17,18;UBERON:0004852,7.91e-17,18;UBERON:0002465,1.29e-14,10;UBERON:0000055,9.38e-14,68;UBERON:0000487,1.07e-13,22;UBERON:0010523,1.50e-12,3;UBERON:0001915,1.50e-12,3;UBERON:0001982,1.50e-12,3;UBERON:0006914,5.32e-12,25;UBERON:0002049,9.17e-12,78;UBERON:0007798,9.17e-12,78;UBERON:0004535,1.54e-09,109;UBERON:0001009,3.14e-09,112 | |||
|phase1_expression=0,0.214100523890983,0,0,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0.602694528023977,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,0.369754010166788,0,0,0,1.10799081706375,0,0,0,0,0,0,0,0,0,0,0.619412741790207,0.28769239232215,0,1.18241114944293,0,0,0,0,0,0,0,0,0.639337125799041,0.329851300186716,0,0,0,0,0,0.502497330513487,0.521482918420201,3.04064382587163,0,0.368277635987565,0.949387162322653,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255725123687061,0.361439152384566,0,0,0.795285947051099,0.486634870302636,0,0,0.175669571386252,0,0,0,0,0,0,0,0,0,1.39133685156694,0,0,0,0.838998872419812,0.275118041940067,0.626984899610432,0.775250277507987,1.77883131343355,0,1.20848795132744,4.56163263431108,0.732186172644509,0.735326160691737,1.62028389576352,0.17859945656816,0.22452937262617,0.112611480483322,1.53316637465883,1.89853131913626,0,0,0,0,0,0.506522046658319,1.45650098894541,0.286836620748814,0,0,2.1349799145941,0.49333509683432,0,0.538842688278752,0.980771418680752,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340296549480063,0,0,0.211931901159562,0,0,0,0,0.337552664482532,0.292311015483596,0.504867548488229,0,0,0,0.10075209822764,0,0,0.818238361772504,0,0,0,0,0,0,0,0,0,0,0,0.721879481669586,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,0,0,0,9.96128489551409,12.9635943521451,6.65889532821094,0,0,0,0,0,0.93733833986777,0,0.567100388969546,0,0,0,0,0,0.207328115540772,0.144119953416961,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0.153461973288062,0.280660094433074,0.128139149255701,0,0,0,0.154209693802656,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.13733384070897,0.340187410553031,0.647747748306418,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0,0,3.1903178123646,0.2023155617111,0,0.31481234683064,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0.190630193923825,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0.202910376962704,0.30982349809975,0.845086807596724,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423347165447766,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,1.97764649072111,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176512253383001,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0.5085370753095,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0.471612915298998,0.414239055347196,0,0,0,0,0.544017803369474,1.5041393641362,6.73960268879615,4.91808946064707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0,0,0,0,0.151230923763239,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343395705182793,0.336749488765919,0,0,0,0.260994291965212,0,0,0,0,0,0,0.176689145945881,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.61116493536703,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163771917510097,0,0,0,0,0,0,0,0,0.351742488719241,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0,0,0,0.235676547101626,0,0,0,0,0.0939839179798536,0.257831551894309,0,0,0,0,0,0,0,0,0,0,0,0.371995018166751,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr12:47053880..47053887,+ | |||
}} |
Latest revision as of 08:42, 24 July 2015
Short description: | p@chr12:47053880..47053887, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:47053880..47053887, + |
Coexpression cluster: | C514_Lymphatic_Endothelial_mycosis_appendix_heart_CD14_migratory |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 7.16e-35 | 24 |
endothelial cell | 9.43e-33 | 36 |
meso-epithelial cell | 8.05e-26 | 45 |
lymphangioblast | 3.41e-24 | 6 |
endothelial cell of lymphatic vessel | 3.41e-24 | 6 |
vascular lymphangioblast | 3.41e-24 | 6 |
lining cell | 1.34e-19 | 58 |
barrier cell | 1.34e-19 | 58 |
blood vessel endothelial cell | 7.91e-17 | 18 |
embryonic blood vessel endothelial progenitor cell | 7.91e-17 | 18 |
capillary endothelial cell | 1.50e-12 | 3 |
mesodermal cell | 2.32e-08 | 121 |
glomerular endothelial cell | 1.02e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 3.26e-18 | 8 |
lymph vasculature | 3.26e-18 | 8 |
lymphatic part of lymphoid system | 3.26e-18 | 8 |
blood vessel endothelium | 7.91e-17 | 18 |
endothelium | 7.91e-17 | 18 |
cardiovascular system endothelium | 7.91e-17 | 18 |
lymphoid system | 1.29e-14 | 10 |
vessel | 9.38e-14 | 68 |
simple squamous epithelium | 1.07e-13 | 22 |
microcirculatory vessel | 1.50e-12 | 3 |
endothelium of capillary | 1.50e-12 | 3 |
capillary | 1.50e-12 | 3 |
squamous epithelium | 5.32e-12 | 25 |
vasculature | 9.17e-12 | 78 |
vascular system | 9.17e-12 | 78 |
cardiovascular system | 1.54e-09 | 109 |
circulatory system | 3.14e-09 | 112 |