FFCP PHASE1:Hg19::chr12:41582739..41582757,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=29951 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30552 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-29bp_to_uc010skn.1_5end | |||
|cluster_id=chr12:41582739..41582757,+ | |||
|coexpression_cluster_id=C48 | |||
|description=CAGE_peak_5_at_PDZRN4_5end | |||
|id=chr12:41582739..41582757,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;4.67e-17;2!UBERON:0006603;7.72e-10;65!UBERON:0001045;9.83e-10;1!UBERON:0000358;1.43e-09;1!UBERON:0009143;3.25e-09;1!UBERON:0005754;3.25e-09;1!UBERON:0010115;3.25e-09;1!UBERON:0004874;3.25e-09;1!UBERON:0005062;8.20e-09;4!UBERON:0007284;8.20e-09;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!8.25e-78!115;UBERON:0001049!1.86e-33!57;UBERON:0005068!1.86e-33!57;UBERON:0006241!1.86e-33!57;UBERON:0007135!1.86e-33!57;UBERON:0002616!8.35e-28!59;UBERON:0003075!1.48e-26!86;UBERON:0007284!1.48e-26!86;UBERON:0002346!3.04e-26!90;UBERON:0001017!7.81e-26!82;UBERON:0005743!7.93e-26!86;UBERON:0002780!8.85e-26!41;UBERON:0001890!8.85e-26!41;UBERON:0006240!8.85e-26!41;UBERON:0002020!2.91e-25!34;UBERON:0003528!2.91e-25!34;UBERON:0000955!3.19e-25!69;UBERON:0006238!3.19e-25!69;UBERON:0003080!5.42e-25!42;UBERON:0000073!6.16e-25!94;UBERON:0001016!6.16e-25!94;UBERON:0001893!8.50e-25!34;UBERON:0001869!1.79e-24!32;UBERON:0002791!1.96e-23!33;UBERON:0002619!2.26e-22!22;UBERON:0001950!4.40e-22!20;UBERON:0000956!3.35e-19!25;UBERON:0000203!3.35e-19!25;UBERON:0000153!3.82e-17!129;UBERON:0007811!3.82e-17!129;UBERON:0003056!1.64e-16!61;UBERON:0000033!2.01e-15!123;UBERON:0000924!9.96e-14!173;UBERON:0006601!9.96e-14!173;UBERON:0004121!1.39e-13!169;UBERON:0001871!7.28e-11!7;UBERON:0003076!1.69e-09!15;UBERON:0003057!1.69e-09!15;UBERON:0004111!3.41e-09!241;UBERON:0000481!4.43e-09!347;UBERON:0000025!1.12e-08!194;UBERON:0000468!1.66e-08!659;UBERON:0000477!4.57e-08!286;UBERON:0000062!4.63e-08!511;UBERON:0006947!8.81e-08!3;UBERON:0004054!8.81e-08!3;UBERON:0000064!9.34e-08!219;UBERON:0002308!1.72e-07!9;UBERON:0000125!1.72e-07!9;UBERON:0004733!1.83e-07!12;UBERON:0002028!1.83e-07!12;UBERON:0007277!1.83e-07!12;UBERON:0002420!1.89e-07!9;UBERON:0007245!1.89e-07!9;UBERON:0010009!1.89e-07!9;UBERON:0010011!1.89e-07!9;UBERON:0000454!1.89e-07!9;UBERON:0000922!4.10e-07!612;UBERON:0000200!4.32e-07!6;UBERON:0000988!7.61e-07!3;UBERON:0004732!8.52e-07!13 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;5.14e-25;3!UBERON:0004054;5.14e-25;3!UBERON:0005904;6.35e-19;4!UBERON:0001155;1.41e-14;9!UBERON:0003135;5.80e-12;11!UBERON:0000059;5.80e-12;11!UBERON:0003978;1.87e-11;3!UBERON:0000946;1.87e-11;3!UBERON:0000160;5.06e-11;17!UBERON:0001154;9.83e-10;1!UBERON:0001000;9.83e-10;1!UBERON:0001153;9.83e-10;1!UBERON:0009854;9.83e-10;1!UBERON:0005352;9.83e-10;1!UBERON:0001301;1.43e-09;1!UBERON:0002363;3.25e-09;1!UBERON:0000989;3.25e-09;1!UBERON:0000998;3.25e-09;1!UBERON:0002135;3.25e-09;1!UBERON:0002146;3.25e-09;1!UBERON:0008811;3.25e-09;1!UBERON:0006868;3.25e-09;1!UBERON:0005623;3.25e-09;1!UBERON:0003101;4.62e-09;22!UBERON:0000079;4.62e-09;22!UBERON:0005409;1.38e-08;22!UBERON:0007023;3.28e-08;114!UBERON:0000058;6.99e-08;10!UBERON:0004921;2.34e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.95e-27,114;UBERON:0006947,3.29e-25,3;UBERON:0004054,3.29e-25,3;UBERON:0005904,4.55e-19,4;UBERON:0001155,1.29e-14,9;UBERON:0003135,4.18e-12,11;UBERON:0000059,5.41e-12,11;UBERON:0003978,1.36e-11,3;UBERON:0009751,1.36e-11,3;UBERON:0000946,1.36e-11,3;UBERON:0002523,1.36e-11,3;UBERON:0005983,1.36e-11,3;UBERON:0002165,1.36e-11,3;UBERON:0002062,1.36e-11,3;UBERON:0007280,1.36e-11,3;UBERON:0000160,4.80e-11,17;UBERON:0001000,8.68e-10,1;UBERON:0005352,8.68e-10,1;UBERON:0001154,1.12e-09,1;UBERON:0001153,1.12e-09,1;UBERON:0001045,1.12e-09,1;UBERON:0001301,1.21e-09,1;UBERON:0000989,1.99e-09,1;UBERON:0008811,1.99e-09,1;UBERON:0006258,1.99e-09,1;UBERON:0005876,1.99e-09,1;UBERON:0004874,1.99e-09,1;UBERON:0002135,2.16e-09,1;UBERON:0002363,2.55e-09,1;UBERON:0007645,2.55e-09,1;UBERON:0007647,2.55e-09,1;UBERON:0010115,2.55e-09,1;UBERON:0000998,2.77e-09,1;UBERON:0006868,2.77e-09,1;UBERON:0002146,3.00e-09,1;UBERON:0005623,3.00e-09,1;UBERON:0003101,3.72e-09,22;UBERON:0000079,3.72e-09,22;UBERON:0005409,1.37e-07,25;UBERON:0004876,3.65e-07,11;UBERON:0003064,3.89e-07,28 | |||
|phase1_expression=0.908391896352783,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.741800787835671,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355391948742546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0.994147647766298,0.422008249231538,0,0,0,1.19548792950642,3.03912307084262,0,0,0,0,0,0,0,3.15658898038188,0,0,0.969332746095218,0.185536196323703,0,0,0,0,0,0,0,0,0,0.173624994933292,0.885741385813839,0.361789315876224,0,1.10579259931225,0.295547618953547,0.219385397153973,0,0,1.07730361905316,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.99052386215701,2.38835424159016,1.22206028986725,0,0,0,0.134802265961354,0.802577647298789,0,0,0,0,3.94584402849391,3.62972148145992,0,1.70603764996917,0,0,0,0,0,0,0,0,0,0,0,2.97035336011451,0,0,0,0,1.16386819786103,0,0.677942222341597,0,0,0.443175571691151,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,1.95497680890578,1.60412296808179,0,0.199679000498991,0,0,0.134366944973453,0,0,0,0,0,0,0,0,0.408610218334727,0,0,0,0,0,0.485996453264197,0,0.315222829196793,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775697738169303,0.66116300871345,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0.573409195690071,0,0.620964029413834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0.109209638192014,0,0,0.123935764259002,0,0,0,0,0,0,0.321146125482298,1.41696576325585,0.638535436228605,0.205116364240755,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0.526472298444801,0,0,0,0,0,0.270150338473579,0.781078098613847,0.206686796501184,0.380494861163441,0,0,1.98484471355718,0,0.255524855279191,0.535701835878287,0,0.606965604236632,0,0.79832133146375,0,0,0.475788130837822,0.131545547125698,0,0.111231401892069,2.59027206406696,0,0,0,0,0,2.35872595782966,0,0,0,0,0,0,0,0,0,0,1.69354820076372,0,0,0,0,0,0,0,0.102662806856247,0,0,0.467878926924211,0,0.83244063544298,0,0,0,0.540219106755613,0.655678681511872,0,9.31563622664841,0,1.76677620403451,0.297046400327086,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0.436350690340377,1.5870805215462,0,0,0,0,0,0.253397002022874,0,0,0,0,0.909344378618873,0.267964130156178,0,0.517164979309476,1.49263787330687,0.23806443146374,0,0.0620747142958579,0,0.12729431655633,0.404234377916439,0.435433495793923,0,0.0673520530145875,0.215166616178029,0.665320713092027,0,0,0,0,2.34640942403454,0.488965776731466,0,0,0.201273793591026,0 | |||
|short_description=p5@PDZRN4 | |||
}} |
Latest revision as of 07:39, 18 September 2015
Short description: | p5@PDZRN4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PDZRN4_5end |
Coexpression cluster: | C48_smooth_bladder_esophagus_colon_penis_aorta_uterus |
Association with transcript: | -29bp_to_uc010skn.1_5end |
EntrezGene: | PDZRN4 |
HGNC: | 30552 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data