FFCP PHASE1:Hg19::chr12:20963647..20963666,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=28234 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10961 | |||
|TSSclassifier=strong | |||
|UniProt=Q9NPD5 | |||
|association_with_transcript=0bp_to_ENST00000381545_5end | |||
|cluster_id=chr12:20963647..20963666,+ | |||
|coexpression_cluster_id=C5 | |||
|description=CAGE_peak_2_at_SLCO1B3_5end | |||
|id=chr12:20963647..20963666,+ | |||
|ontology_enrichment_celltype=CL:0000181!2.87e-08!12;CL:0000417!2.87e-08!12;CL:0000668!2.87e-08!12;CL:0000414!2.87e-08!12;CL:0000412!2.87e-08!12;CL:0000182!2.87e-08!12 | |||
|ontology_enrichment_celltype_v019=CL:0000182;2.90e-19;12!CL:0002563;2.04e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.90e-19,12;CL:0002563,2.04e-07,4;CL:0000223,3.05e-07,58 | |||
|ontology_enrichment_development_v019=UBERON:0004161;6.06e-10;11!UBERON:0009497;1.47e-08;13!CL:0000223;8.89e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005057!1.19e-13!26;UBERON:0002107!2.23e-13!19;UBERON:0006925!2.23e-13!19;UBERON:0008836!2.23e-13!19;UBERON:0008835!1.54e-11!22;UBERON:0003894!1.54e-11!22;UBERON:0001301!4.01e-11!1;UBERON:0009854!4.95e-11!23;UBERON:0003929!5.32e-11!54;UBERON:0007499!3.88e-10!25;UBERON:0009497!3.88e-10!25;UBERON:0000015!3.88e-10!25;UBERON:0002423!3.88e-10!25;UBERON:0006235!3.88e-10!25;UBERON:0004161!3.88e-10!25;UBERON:0009856!9.64e-10!26;UBERON:0004921!3.20e-09!129;UBERON:0004185!3.20e-09!129;UBERON:0005911!9.81e-09!82;UBERON:0005172!2.69e-08!55;UBERON:0005173!2.69e-08!55;UBERON:0002365!3.81e-08!31;UBERON:0002330!3.81e-08!31;UBERON:0002530!1.10e-07!59;UBERON:0000077!1.22e-07!130;UBERON:0002417!2.08e-07!61;UBERON:0000916!2.08e-07!61;UBERON:0001007!2.26e-07!155;UBERON:0001555!2.26e-07!155;UBERON:0007026!2.26e-07!155;UBERON:0002368!3.41e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;1.28e-32;19!UBERON:0006925;1.28e-32;19!UBERON:0002423;6.72e-25;25!UBERON:0002365;4.22e-20;31!UBERON:0002330;4.22e-20;31!UBERON:0002368;2.18e-17;33!UBERON:0000949;1.23e-12;43!UBERON:0005172;3.87e-09;52!UBERON:0005173;3.87e-09;52!UBERON:0001007;5.52e-09;81!UBERON:0001242;2.04e-07;4!UBERON:0001262;2.04e-07;4!UBERON:0004786;2.04e-07;4!UBERON:0004808;2.04e-07;4!UBERON:0001277;2.04e-07;4!UBERON:0002417;4.22e-07;58!UBERON:0000916;4.22e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,1.28e-32,19;UBERON:0006925,1.28e-32,19;UBERON:0008836,1.28e-32,19;UBERON:0008835,3.10e-28,22;UBERON:0003894,3.10e-28,22;UBERON:0009854,5.01e-27,23;UBERON:0007499,6.72e-25,25;UBERON:0009497,6.72e-25,25;UBERON:0000015,6.72e-25,25;UBERON:0002423,6.72e-25,25;UBERON:0006235,6.72e-25,25;UBERON:0004161,6.72e-25,25;UBERON:0009856,5.87e-24,26;UBERON:0002365,3.71e-20,31;UBERON:0002330,3.71e-20,31;UBERON:0002368,6.78e-18,35;UBERON:0003929,1.51e-16,54;UBERON:0000949,5.46e-14,45;UBERON:0005172,1.06e-11,54;UBERON:0005173,1.06e-11,54;UBERON:0005911,6.10e-11,82;UBERON:0002530,9.89e-11,59;UBERON:0002417,1.48e-10,60;UBERON:0000916,1.48e-10,60;UBERON:0004921,1.50e-07,118;UBERON:0001242,2.04e-07,4;UBERON:0001262,2.04e-07,4;UBERON:0004786,2.04e-07,4;UBERON:0004808,2.04e-07,4;UBERON:0001277,2.04e-07,4;UBERON:0001041,2.46e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458426764241994,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,26.6185573125845,79.6090045508877,117.567191429599,0,6.3953988042419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,142.608760120448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,139.332825149633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.858452096273142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,58.1812367701987,13.2506888912221,0,0,0.342173675768659,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0.913158720509496,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243835849964539,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128915775947154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p2@SLCO1B3 | |||
}} |
Latest revision as of 19:11, 17 September 2015
Short description: | p2@SLCO1B3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SLCO1B3_5end |
Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
Association with transcript: | 0bp_to_ENST00000381545_5end |
EntrezGene: | SLCO1B3 |
HGNC: | 10961 |
UniProt: | Q9NPD5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.90e-19 | 12 |
intestinal epithelial cell | 2.04e-07 | 4 |
endodermal cell | 3.05e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
liver | 1.28e-32 | 19 |
digestive gland | 1.28e-32 | 19 |
liver bud | 1.28e-32 | 19 |
hepatic diverticulum | 3.10e-28 | 22 |
liver primordium | 3.10e-28 | 22 |
digestive tract diverticulum | 5.01e-27 | 23 |
epithelial sac | 6.72e-25 | 25 |
epithelium of foregut-midgut junction | 6.72e-25 | 25 |
anatomical boundary | 6.72e-25 | 25 |
hepatobiliary system | 6.72e-25 | 25 |
foregut-midgut junction | 6.72e-25 | 25 |
septum transversum | 6.72e-25 | 25 |
sac | 5.87e-24 | 26 |
exocrine gland | 3.71e-20 | 31 |
exocrine system | 3.71e-20 | 31 |
endocrine gland | 6.78e-18 | 35 |
gut epithelium | 1.51e-16 | 54 |
endocrine system | 5.46e-14 | 45 |
abdomen element | 1.06e-11 | 54 |
abdominal segment element | 1.06e-11 | 54 |
endo-epithelium | 6.10e-11 | 82 |
gland | 9.89e-11 | 59 |
abdominal segment of trunk | 1.48e-10 | 60 |
abdomen | 1.48e-10 | 60 |
subdivision of digestive tract | 1.50e-07 | 118 |
intestinal mucosa | 2.04e-07 | 4 |
wall of intestine | 2.04e-07 | 4 |
gastrointestinal system mucosa | 2.04e-07 | 4 |
gastrointestinal system epithelium | 2.04e-07 | 4 |
intestinal epithelium | 2.04e-07 | 4 |
foregut | 2.46e-07 | 87 |